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Started by upstream project "BIOFORMATS-test-repo" build number 70 originally caused by: Started by upstream project "Trigger" build number 78 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins9392231949154508288.sh + '[' ecat7 = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_10540_merge_ci -v /uod/idr/repos/curated/ecat7:/data -v /uod/idr-scratch/merge-ci/curated/ecat7:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:45:07,049 |-INFO in ch.qos.logback.classic.util.ContextInitializer@61386958 - No custom configurators were discovered as a service. [testng] 01:45:07,049 |-INFO in ch.qos.logback.classic.util.ContextInitializer@61386958 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:45:07,053 |-INFO in ch.qos.logback.classic.util.ContextInitializer@61386958 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:45:07,056 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:45:07,057 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:45:07,058 |-INFO in ch.qos.logback.classic.util.ContextInitializer@61386958 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 5 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:45:07,058 |-INFO in ch.qos.logback.classic.util.ContextInitializer@61386958 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:45:07,060 |-INFO in ch.qos.logback.classic.util.ContextInitializer@61386958 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:45:07,061 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:45:07,062 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:45:07,062 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:45:07,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:45:07,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:45:07,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:45:07,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:45:07,461 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:45:07,461 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:45:07,461 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:45:07,462 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:45:07,462 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:45:07,463 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:45:07,464 |-INFO in ch.qos.logback.classic.util.ContextInitializer@61386958 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 404 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-21 01:45:07,485] [main] java.version = 11.0.16 [testng] 01:45:07,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:45:07,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:45:07,560 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-21_01-45-07.log] [testng] 01:45:07,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-05-21 01:45:07,565] [main] testng.directory = /data [testng] [2024-05-21 01:45:07,566] [main] testng.configDirectory = /config [testng] [2024-05-21 01:45:07,585] [main] testng.multiplier = 1.0 [testng] [2024-05-21 01:45:07,587] [main] testng.in-memory = false [testng] [2024-05-21 01:45:07,587] [main] testng.allow-missing = false [testng] [2024-05-21 01:45:07,587] [main] user.language = en [testng] [2024-05-21 01:45:07,588] [main] user.country = ${user.country} [testng] [2024-05-21 01:45:07,588] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-21 01:45:08,708] [main] ---------------------------------------- [testng] [2024-05-21 01:45:08,708] [main] Total files: 9 [testng] [2024-05-21 01:45:08,708] [main] Scan time: 1.12 s (124 ms/file) [testng] [2024-05-21 01:45:08,709] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 8 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-21 01:45:10,280] [pool-1-thread-1] Initializing /data/public/torsten/gradient-512x512x10.v: [testng] 01:45:10,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:45:10,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:45:10,283 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-21_01-45-10.log] [testng] 01:45:10,283 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23e9ae01 - End of configuration. [testng] [2024-05-21 01:45:10,336] [pool-1-thread-8] Initializing /data/torsten/ecat7-ver70-testfile.v: [testng] 01:45:10,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:45:10,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:45:10,338 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-21_01-45-10.log] [testng] 01:45:10,339 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a67bdd2 - End of configuration. [testng] [2024-05-21 01:45:10,380] [pool-1-thread-7] Initializing /data/mark/FP609_2_112107_bl2.v: [testng] 01:45:10,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:45:10,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:45:10,381 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-21_01-45-10.log] [testng] 01:45:10,381 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d2bd71e - End of configuration. [testng] [2024-05-21 01:45:10,416] [pool-1-thread-6] Initializing /data/mark/motiontracker.mnc: [testng] 01:45:10,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:45:10,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:45:10,417 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-21_01-45-10.log] [testng] 01:45:10,418 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dcfd499 - End of configuration. [testng] [2024-05-21 01:45:10,580] [pool-1-thread-5] Initializing /data/mark/MotionTracker_94_ac1_de3.v: [testng] 01:45:10,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:45:10,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:45:10,582 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-21_01-45-10.log] [testng] 01:45:10,583 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5749ba89 - End of configuration. [testng] [2024-05-21 01:45:10,619] [pool-1-thread-4] Initializing /data/mark/FP609_2_112107_bl1.v: [testng] 01:45:10,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:45:10,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:45:10,620 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-21_01-45-10.log] [testng] 01:45:10,620 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51eb2dc5 - End of configuration. [testng] [2024-05-21 01:45:10,669] [pool-1-thread-3] Initializing /data/mark/FP609_1_112007_bl2.v: [testng] 01:45:10,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:45:10,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:45:10,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-21_01-45-10.log] [testng] 01:45:10,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6363a939 - End of configuration. [testng] [2024-05-21 01:45:10,689] [pool-1-thread-2] Initializing /data/mark/FP609_1_112007_bl1.v: [testng] 01:45:10,689 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:45:10,689 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:45:10,690 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-21_01-45-10.log] [testng] 01:45:10,690 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26ca7039 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 424, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 12 seconds Finished: SUCCESS