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Started by upstream project "BIOFORMATS-test-repo" build number 71 originally caused by: Started by upstream project "Trigger" build number 79 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins3749279433187192817.sh + '[' cri = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_10727_merge_ci -v /uod/idr/repos/curated/cri:/data -v /uod/idr-scratch/merge-ci/curated/cri:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 04:34:28,320 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:34:28,321 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 04:34:28,321 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:34:28,323 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:34:28,323 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:34:28,324 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:34:28,324 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:34:28,324 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:34:28,325 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:34:28,326 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:34:28,326 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:34:28,327 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:34:28,507 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:34:28,507 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:34:28,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:34:28,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:34:28,539 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:34:28,539 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:34:28,540 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:34:28,540 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:34:28,540 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 04:34:28,541 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 04:34:28,541 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 216 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-22 04:34:28,551] [main] java.version = 17.0.2 [testng] 04:34:28,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:34:28,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:28,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-22_04-34-28.log] [testng] 04:34:28,600 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-05-22 04:34:28,603] [main] testng.directory = /data [testng] [2024-05-22 04:34:28,603] [main] testng.configDirectory = /config [testng] [2024-05-22 04:34:28,613] [main] testng.multiplier = 1.0 [testng] [2024-05-22 04:34:28,614] [main] testng.in-memory = false [testng] [2024-05-22 04:34:28,614] [main] testng.allow-missing = false [testng] [2024-05-22 04:34:28,614] [main] user.language = en [testng] [2024-05-22 04:34:28,615] [main] user.country = ${user.country} [testng] [2024-05-22 04:34:28,615] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-22 04:34:29,699] [main] ---------------------------------------- [testng] [2024-05-22 04:34:29,699] [main] Total files: 96 [testng] [2024-05-22 04:34:29,699] [main] Scan time: 1.084 s (11 ms/file) [testng] [2024-05-22 04:34:29,699] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 96 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-22 04:34:39,271] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_690.tif: [testng] 04:34:39,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:34:39,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:39,274 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-22_04-34-39.log] [testng] 04:34:39,275 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b4d83dc - End of configuration. [testng] [2024-05-22 04:34:39,580] [pool-1-thread-12] Initializing /data/thomas/B3 FITC Metadata.bmp: [testng] 04:34:39,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:34:39,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:39,584 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-22_04-34-39.log] [testng] 04:34:39,587 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ed28540 - End of configuration. [testng] [2024-05-22 04:34:39,641] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_610.tif: [testng] 04:34:39,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:34:39,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:39,649 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-22_04-34-39.log] [testng] 04:34:39,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@604ecba9 - End of configuration. [testng] [2024-05-22 04:34:39,755] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_670.tif: [testng] 04:34:39,755 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:34:39,755 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:39,757 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-22_04-34-39.log] [testng] 04:34:39,758 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f86ff6f - End of configuration. [testng] [2024-05-22 04:34:39,852] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_890.tif: [testng] 04:34:39,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:34:39,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:39,854 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-22_04-34-39.log] [testng] 04:34:39,854 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dd2cffe - End of configuration. [testng] [2024-05-22 04:34:39,952] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_800.tif: [testng] 04:34:39,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:34:39,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:39,954 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-22_04-34-39.log] [testng] 04:34:39,955 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b514b5a - End of configuration. [testng] [2024-05-22 04:34:39,998] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_780.tif: [testng] 04:34:39,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:34:39,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:40,000 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-22_04-34-40.log] [testng] 04:34:40,000 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d81beff - End of configuration. [testng] [2024-05-22 04:34:40,047] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_700.tif: [testng] 04:34:40,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:34:40,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:40,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-22_04-34-40.log] [testng] 04:34:40,049 |-INFO in ch.qos.logback.core.sift.SiftProcessor@166a5f9b - End of configuration. [testng] [2024-05-22 04:34:40,084] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_790.tif: [testng] 04:34:40,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:34:40,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:40,086 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-22_04-34-40.log] [testng] 04:34:40,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e309c0f - End of configuration. [testng] [2024-05-22 04:34:40,126] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_520.tif: [testng] 04:34:40,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:34:40,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:40,128 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-22_04-34-40.log] [testng] 04:34:40,128 |-INFO in ch.qos.logback.core.sift.SiftProcessor@696201b5 - End of configuration. [testng] [2024-05-22 04:34:40,164] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_770.tif: [testng] 04:34:40,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:34:40,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:40,166 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-22_04-34-40.log] [testng] 04:34:40,166 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36f0e3f6 - End of configuration. [testng] [2024-05-22 04:34:40,214] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_830.tif: [testng] 04:34:40,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:34:40,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:40,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-22_04-34-40.log] [testng] 04:34:40,216 |-INFO in ch.qos.logback.core.sift.SiftProcessor@299cde37 - End of configuration. [testng] [2024-05-22 04:34:43,333] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_800.tif: [testng] [2024-05-22 04:34:43,401] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_660.tif: [testng] [2024-05-22 04:34:43,451] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_640.tif: [testng] [2024-05-22 04:34:43,492] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_600.tif: [testng] [2024-05-22 04:34:43,532] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_900.tif: [testng] [2024-05-22 04:34:43,565] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_580.tif: [testng] [2024-05-22 04:34:43,606] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_620.tif: [testng] [2024-05-22 04:34:43,638] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_560.tif: [testng] [2024-05-22 04:34:43,670] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_910.tif: [testng] [2024-05-22 04:34:43,704] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_660.tif: [testng] [2024-05-22 04:34:43,741] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_700.tif: [testng] [2024-05-22 04:34:43,780] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_930.tif: [testng] [2024-05-22 04:34:44,745] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_850.tif: [testng] [2024-05-22 04:34:44,778] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_870.tif: [testng] [2024-05-22 04:34:44,819] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_520.tif: [testng] [2024-05-22 04:34:44,844] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_770.tif: [testng] [2024-05-22 04:34:44,877] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_530.tif: [testng] [2024-05-22 04:34:44,906] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_640.tif: [testng] [2024-05-22 04:34:44,931] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_540.tif: [testng] [2024-05-22 04:34:44,955] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_890.tif: [testng] [2024-05-22 04:34:44,995] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_940.tif: [testng] [2024-05-22 04:34:45,035] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_950.tif: [testng] [2024-05-22 04:34:45,112] [pool-1-thread-4] Initializing /data/thomas/B3 DAPI.im3: [testng] [2024-05-22 04:34:45,146] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_720.tif: [testng] [2024-05-22 04:34:45,817] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_720.tif: [testng] [2024-05-22 04:34:45,845] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_730.tif: [testng] [2024-05-22 04:34:45,872] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_810.tif: [testng] [2024-05-22 04:34:45,895] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_710.tif: [testng] [2024-05-22 04:34:45,919] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_750.tif: [testng] [2024-05-22 04:34:45,948] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_950.tif: [testng] [2024-05-22 04:34:45,970] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_600.tif: [testng] [2024-05-22 04:34:45,992] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_690.tif: [testng] [2024-05-22 04:34:46,018] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_910.tif: [testng] [2024-05-22 04:34:46,043] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_510.tif: [testng] [2024-05-22 04:34:46,070] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_750.tif: [testng] [2024-05-22 04:34:46,796] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_880.tif: [testng] [2024-05-22 04:34:46,939] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_570.tif: [testng] [2024-05-22 04:34:46,964] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_810.tif: [testng] [2024-05-22 04:34:46,990] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_900.tif: [testng] [2024-05-22 04:34:47,019] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_680.tif: [testng] [2024-05-22 04:34:47,050] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_760.tif: [testng] [2024-05-22 04:34:47,092] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_850.tif: [testng] [2024-05-22 04:34:47,144] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_560.tif: [testng] [2024-05-22 04:34:47,187] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_650.tif: [testng] [2024-05-22 04:34:47,229] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_710.tif: [testng] [2024-05-22 04:34:47,275] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_930.tif: [testng] [2024-05-22 04:34:47,310] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_760.tif: [testng] [2024-05-22 04:34:47,807] [pool-1-thread-10] Initializing /data/thomas/B3 DAPI Metadata.bmp: [testng] [2024-05-22 04:34:48,002] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_570.tif: [testng] [2024-05-22 04:34:48,029] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_880.tif: [testng] [2024-05-22 04:34:48,067] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_620.tif: [testng] [2024-05-22 04:34:48,087] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_500.tif: [testng] [2024-05-22 04:34:48,109] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_590.tif: [testng] [2024-05-22 04:34:48,134] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_580.tif: [testng] [2024-05-22 04:34:48,163] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_550.tif: [testng] [2024-05-22 04:34:48,189] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 DAPI_920.tif: [testng] [2024-05-22 04:34:48,216] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_870.tif: [testng] [2024-05-22 04:34:48,245] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_860.tif: [testng] [2024-05-22 04:34:48,268] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_780.tif: [testng] [2024-05-22 04:34:48,587] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_840.tif: [testng] [2024-05-22 04:34:48,899] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_790.tif: [testng] [2024-05-22 04:34:48,925] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_630.tif: [testng] [2024-05-22 04:34:48,946] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_590.tif: [testng] [2024-05-22 04:34:48,967] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_530.tif: [testng] [2024-05-22 04:34:48,990] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_740.tif: [testng] [2024-05-22 04:34:49,023] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_680.tif: [testng] [2024-05-22 04:34:49,046] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_670.tif: [testng] [2024-05-22 04:34:49,069] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_650.tif: [testng] [2024-05-22 04:34:49,092] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_730.tif: [testng] [2024-05-22 04:34:49,122] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_610.tif: [testng] [2024-05-22 04:34:49,151] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_540.tif: [testng] [2024-05-22 04:34:49,462] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_740.tif: [testng] [2024-05-22 04:34:49,874] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_630.tif: [testng] [2024-05-22 04:34:49,919] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_500.tif: [testng] [2024-05-22 04:34:49,965] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_940.tif: [testng] [2024-05-22 04:34:49,996] [pool-1-thread-4] Initializing /data/thomas/B3 FITC.im3: [testng] [2024-05-22 04:34:50,023] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_820.tif: [testng] [2024-05-22 04:34:50,097] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_860.tif: [testng] [2024-05-22 04:34:50,155] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_510.tif: [testng] [2024-05-22 04:34:50,204] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_820.tif: [testng] [2024-05-22 04:34:50,257] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_830.tif: [testng] [2024-05-22 04:34:50,297] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_550.tif: [testng] [2024-05-22 04:34:50,339] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_920.tif: [testng] [2024-05-22 04:34:50,859] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_840.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5088, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 28 seconds Finished: SUCCESS