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Started by upstream project "BIOFORMATS-test-repo" build number 73 originally caused by: Started by upstream project "Trigger" build number 81 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins8697225752312519175.sh + '[' canon = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_11005_merge_ci -v /uod/idr/repos/curated/canon:/data -v /uod/idr-scratch/merge-ci/curated/canon:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:30:52,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:30:52,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:30:52,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:30:52,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:30:52,432 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:30:52,432 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:30:52,432 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:30:52,433 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:30:52,433 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:30:52,434 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:30:52,434 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 534 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-24 01:30:52,472] [main] java.version = 1.8.0_342 [testng] 01:30:52,477 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:30:52,477 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:52,558 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-24_01-30-52.log] [testng] 01:30:52,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-05-24 01:30:52,562] [main] testng.directory = /data [testng] [2024-05-24 01:30:52,563] [main] testng.configDirectory = /config [testng] [2024-05-24 01:30:52,619] [main] testng.multiplier = 1.0 [testng] [2024-05-24 01:30:52,620] [main] testng.in-memory = false [testng] [2024-05-24 01:30:52,620] [main] testng.allow-missing = false [testng] [2024-05-24 01:30:52,621] [main] user.language = en [testng] [2024-05-24 01:30:52,621] [main] user.country = ${user.country} [testng] [2024-05-24 01:30:52,621] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-05-24 01:30:54,767] [main] ---------------------------------------- [testng] [2024-05-24 01:30:54,767] [main] Total files: 13 [testng] [2024-05-24 01:30:54,767] [main] Scan time: 2.146 s (165 ms/file) [testng] [2024-05-24 01:30:54,767] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 13 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-24 01:30:58,546] [pool-1-thread-1] Initializing /data/pete/Raw-THM.THM: [testng] 01:30:58,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:30:58,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:58,549 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-24_01-30-58.log] [testng] 01:30:58,550 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4442add9 - End of configuration. [testng] [2024-05-24 01:30:58,859] [pool-1-thread-12] Initializing /data/pete/DNG-THM.THM: [testng] 01:30:58,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:30:58,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:58,861 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-24_01-30-58.log] [testng] 01:30:58,861 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19ceb351 - End of configuration. [testng] [2024-05-24 01:30:58,924] [pool-1-thread-11] Initializing /data/pete/DNG-JPG.JPG: [testng] 01:30:58,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:30:58,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:58,925 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-24_01-30-58.log] [testng] 01:30:58,926 |-INFO in ch.qos.logback.core.sift.SiftProcessor@529fb361 - End of configuration. [testng] [2024-05-24 01:30:59,077] [pool-1-thread-10] Initializing /data/pete/DNG-WAV.WAV: [testng] 01:30:59,077 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:30:59,078 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:59,078 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-24_01-30-59.log] [testng] 01:30:59,079 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ecca551 - End of configuration. [testng] [2024-05-24 01:30:59,120] [pool-1-thread-9] Initializing /data/cls/_N5Y0001.CR2: [testng] 01:30:59,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:30:59,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:59,122 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-24_01-30-59.log] [testng] 01:30:59,123 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1df7f97c - End of configuration. [testng] [2024-05-24 01:30:59,196] [pool-1-thread-8] Initializing /data/pete/Raw-JPG.JPG: [testng] 01:30:59,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:30:59,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:59,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-24_01-30-59.log] [testng] 01:30:59,197 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4318abf0 - End of configuration. [testng] [2024-05-24 01:30:59,773] [pool-1-thread-7] Initializing /data/pete/Raw-CR2.CR2: [testng] 01:30:59,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:30:59,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:59,774 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-24_01-30-59.log] [testng] 01:30:59,775 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1613e664 - End of configuration. [testng] [2024-05-24 01:31:00,018] [pool-1-thread-6] Initializing /data/kinor/2013_03_08_0808.CR2: [testng] 01:31:00,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:31:00,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:00,020 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-24_01-31-00.log] [testng] 01:31:00,020 |-INFO in ch.qos.logback.core.sift.SiftProcessor@398f69e9 - End of configuration. [testng] [2024-05-24 01:31:00,371] [pool-1-thread-5] Initializing /data/pete/Raw-WAV.WAV: [testng] 01:31:00,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:31:00,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:00,372 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-24_01-31-00.log] [testng] 01:31:00,373 |-INFO in ch.qos.logback.core.sift.SiftProcessor@134e006c - End of configuration. [testng] [2024-05-24 01:31:01,377] [pool-1-thread-4] Initializing /data/pete/Learning to Fly.JPG: [testng] 01:31:01,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:31:01,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:01,380 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-24_01-31-01.log] [testng] 01:31:01,382 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9c0d3f1 - End of configuration. [testng] [2024-05-24 01:31:02,029] [pool-1-thread-3] Initializing /data/pete/Raw-CRW.CRW: [testng] 01:31:02,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:31:02,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:02,031 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-24_01-31-02.log] [testng] 01:31:02,032 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c3a676 - End of configuration. [testng] [2024-05-24 01:31:02,849] [pool-1-thread-2] Initializing /data/pete/DNG-CRW.CRW: [testng] 01:31:02,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:31:02,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:02,852 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-24_01-31-02.log] [testng] 01:31:02,853 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7beb377c - End of configuration. [testng] [2024-05-24 01:31:13,569] [pool-1-thread-9] Initializing /data/pete/DNG-CR2.CR2: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 689, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 37 seconds Finished: SUCCESS