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Started by upstream project "BIOFORMATS-test-repo" build number 75 originally caused by: Started by upstream project "Trigger" build number 83 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins3612809132816739759.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_11292_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:20:17,831 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:17,832 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:20:17,832 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:17,833 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:17,834 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:17,834 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:17,834 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:17,835 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:17,835 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:17,835 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:17,836 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:17,836 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:18,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:18,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:18,033 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:18,033 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:18,039 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:18,039 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:18,039 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:18,039 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:18,040 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:20:18,040 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:20:18,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 205 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-26 01:20:18,049] [main] java.version = 17.0.2 [testng] 01:20:18,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:18,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:18,098 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-26_01-20-18.log] [testng] 01:20:18,100 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-05-26 01:20:18,103] [main] testng.directory = /data [testng] [2024-05-26 01:20:18,104] [main] testng.configDirectory = /config [testng] [2024-05-26 01:20:18,113] [main] testng.multiplier = 1.0 [testng] [2024-05-26 01:20:18,114] [main] testng.in-memory = false [testng] [2024-05-26 01:20:18,114] [main] testng.allow-missing = false [testng] [2024-05-26 01:20:18,114] [main] user.language = en [testng] [2024-05-26 01:20:18,114] [main] user.country = ${user.country} [testng] [2024-05-26 01:20:18,115] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-26 01:20:18,975] [main] ---------------------------------------- [testng] [2024-05-26 01:20:18,975] [main] Total files: 103 [testng] [2024-05-26 01:20:18,975] [main] Scan time: 0.86 s (8 ms/file) [testng] [2024-05-26 01:20:18,975] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-26 01:20:25,951] [pool-1-thread-1] Initializing /data/chip/Nanogold-1.dm3: [testng] 01:20:25,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:20:25,952 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:25,953 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-26_01-20-25.log] [testng] 01:20:25,953 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40112acc - End of configuration. [testng] [2024-05-26 01:20:25,975] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 01:20:25,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:20:25,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:25,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-26_01-20-25.log] [testng] 01:20:25,976 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d41d43f - End of configuration. [testng] [2024-05-26 01:20:25,990] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] 01:20:25,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:20:25,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:25,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-26_01-20-25.log] [testng] 01:20:25,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49a3fb67 - End of configuration. [testng] [2024-05-26 01:20:26,027] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] 01:20:26,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:20:26,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:26,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-26_01-20-26.log] [testng] 01:20:26,028 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b7e63d9 - End of configuration. [testng] [2024-05-26 01:20:26,042] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] 01:20:26,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:20:26,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:26,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-26_01-20-26.log] [testng] 01:20:26,044 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b961187 - End of configuration. [testng] [2024-05-26 01:20:26,058] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] 01:20:26,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:20:26,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:26,059 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-26_01-20-26.log] [testng] 01:20:26,060 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6561271d - End of configuration. [testng] [2024-05-26 01:20:26,073] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] 01:20:26,073 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:20:26,073 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:26,074 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-26_01-20-26.log] [testng] 01:20:26,074 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7302f6d9 - End of configuration. [testng] [2024-05-26 01:20:26,089] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] 01:20:26,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:20:26,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:26,090 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-26_01-20-26.log] [testng] 01:20:26,091 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f91ba31 - End of configuration. [testng] [2024-05-26 01:20:26,163] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] 01:20:26,163 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:20:26,163 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:26,165 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-26_01-20-26.log] [testng] 01:20:26,166 |-INFO in ch.qos.logback.core.sift.SiftProcessor@229caa90 - End of configuration. [testng] [2024-05-26 01:20:26,487] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] 01:20:26,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:20:26,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:26,488 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-26_01-20-26.log] [testng] 01:20:26,488 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58d247c0 - End of configuration. [testng] [2024-05-26 01:20:26,502] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 01:20:26,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:20:26,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:26,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-26_01-20-26.log] [testng] 01:20:26,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7298e483 - End of configuration. [testng] [2024-05-26 01:20:26,603] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 01:20:26,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:20:26,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:26,604 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-26_01-20-26.log] [testng] 01:20:26,604 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71413ee0 - End of configuration. [testng] [2024-05-26 01:20:28,458] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-05-26 01:20:28,481] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-05-26 01:20:28,568] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-05-26 01:20:28,585] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3: [testng] [2024-05-26 01:20:29,016] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-05-26 01:20:29,029] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-05-26 01:20:29,559] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-05-26 01:20:29,842] [pool-1-thread-9] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-05-26 01:20:29,898] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-05-26 01:20:30,065] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-05-26 01:20:30,279] [pool-1-thread-4] Initializing /data/jay/smallerfile.dm3: [testng] [2024-05-26 01:20:30,311] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-05-26 01:20:30,604] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-05-26 01:20:30,903] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-05-26 01:20:31,255] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-05-26 01:20:31,419] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-05-26 01:20:31,770] [pool-1-thread-7] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-05-26 01:20:31,868] [pool-1-thread-5] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-05-26 01:20:31,934] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-05-26 01:20:32,483] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-05-26 01:20:32,518] [pool-1-thread-12] Initializing /data/jay/dnasample.tif: [testng] [2024-05-26 01:20:33,039] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-05-26 01:20:33,525] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-05-26 01:20:34,509] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-05-26 01:20:34,918] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-05-26 01:20:35,311] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-05-26 01:20:35,537] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-05-26 01:20:36,376] [pool-1-thread-8] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-05-26 01:20:36,679] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-05-26 01:20:36,990] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-05-26 01:20:37,189] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-05-26 01:20:37,282] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-05-26 01:20:37,691] [pool-1-thread-1] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-05-26 01:20:38,060] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-05-26 01:20:38,071] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-05-26 01:20:38,104] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-05-26 01:20:38,826] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-05-26 01:20:39,949] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-05-26 01:20:40,295] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-05-26 01:20:41,642] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-05-26 01:20:42,335] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-05-26 01:20:43,192] [pool-1-thread-1] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-05-26 01:20:44,420] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-05-26 01:20:45,353] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-05-26 01:20:47,095] [pool-1-thread-12] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-26 01:20:47,306] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-05-26 01:20:47,895] [pool-1-thread-8] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-05-26 01:20:48,234] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-05-26 01:20:48,638] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-05-26 01:20:49,848] [pool-1-thread-9] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-05-26 01:20:51,390] [pool-1-thread-12] Initializing /data/qa-7642/8.dm4: [testng] [2024-05-26 01:20:53,618] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-05-26 01:20:53,648] [pool-1-thread-12] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-05-26 01:20:55,027] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-05-26 01:20:56,322] [pool-1-thread-1] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-05-26 01:20:56,928] [pool-1-thread-8] Initializing /data/samples/test-tiles.dm3: [testng] [2024-05-26 01:20:57,838] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-05-26 01:20:58,667] [pool-1-thread-9] Initializing /data/qa-21761/example.dm4: [testng] [2024-05-26 01:20:59,777] [pool-1-thread-4] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-05-26 01:21:00,272] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-05-26 01:21:00,526] [pool-1-thread-8] Initializing /data/jay/DMtest2.dm3: [testng] [2024-05-26 01:21:03,531] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-05-26 01:21:03,561] [pool-1-thread-5] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-05-26 01:21:04,033] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-05-26 01:21:04,404] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-05-26 01:21:05,157] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-05-26 01:21:06,037] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-05-26 01:21:06,050] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-05-26 01:21:06,190] [pool-1-thread-3] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-05-26 01:21:06,281] [pool-1-thread-11] Initializing /data/ofra/lowloss.dm3: [testng] [2024-05-26 01:21:06,365] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-05-26 01:21:06,769] [pool-1-thread-11] Initializing /data/jay/dnasample1.dm3: [testng] [2024-05-26 01:21:07,634] [pool-1-thread-5] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-05-26 01:21:07,988] [pool-1-thread-7] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-05-26 01:21:08,094] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-05-26 01:21:08,160] [pool-1-thread-10] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-05-26 01:21:08,432] [pool-1-thread-5] Initializing /data/jay/DMtest.dm3: [testng] [2024-05-26 01:21:08,707] [pool-1-thread-1] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-05-26 01:21:08,809] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-05-26 01:21:09,623] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-05-26 01:21:10,259] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-05-26 01:21:10,389] [pool-1-thread-7] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-05-26 01:21:10,468] [pool-1-thread-8] Initializing /data/melissa/annotation-test.tif: [testng] [2024-05-26 01:21:10,630] [pool-1-thread-9] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-26 01:21:10,863] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-05-26 01:21:11,093] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 18 seconds Finished: SUCCESS