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Started by upstream project "BIOFORMATS-test-repo" build number 76 originally caused by: Started by upstream project "Trigger" build number 84 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins8008053498738116929.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_11465_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:59,721 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:59,723 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:59,723 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:59,724 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:59,724 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:59,725 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:59,725 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:59,725 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:59,726 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:59,726 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:59,726 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:59,726 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:00,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:00,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:00,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:00,046 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:00,055 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:00,055 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:00,055 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:00,056 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:00,056 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:22:00,057 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:22:00,057 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 331 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-27 01:22:00,070] [main] java.version = 1.8.0_342 [testng] 01:22:00,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:00,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:00,137 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-27_01-22-00.log] [testng] 01:22:00,139 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-05-27 01:22:00,142] [main] testng.directory = /data [testng] [2024-05-27 01:22:00,142] [main] testng.configDirectory = /config [testng] [2024-05-27 01:22:00,165] [main] testng.multiplier = 1.0 [testng] [2024-05-27 01:22:00,168] [main] testng.in-memory = false [testng] [2024-05-27 01:22:00,170] [main] testng.allow-missing = false [testng] [2024-05-27 01:22:00,170] [main] user.language = fr [testng] [2024-05-27 01:22:00,171] [main] user.country = FR [testng] [2024-05-27 01:22:00,171] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-05-27 01:22:08,183] [main] ---------------------------------------- [testng] [2024-05-27 01:22:08,183] [main] Total files: 4424 [testng] [2024-05-27 01:22:08,184] [main] Scan time: 8.011 s (1 ms/file) [testng] [2024-05-27 01:22:08,184] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-27 01:24:21,155] [pool-1-thread-1] Initializing /data/jae/Second image.tif: [testng] 01:24:21,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:24:21,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,157 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-27_01-24-21.log] [testng] 01:24:21,157 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27abe8af - End of configuration. [testng] [2024-05-27 01:24:21,209] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-1/Leica-1-subifds.tiff: [testng] 01:24:21,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:24:21,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,211 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-27_01-24-21.log] [testng] 01:24:21,211 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3be20d23 - End of configuration. [testng] [2024-05-27 01:24:21,283] [pool-1-thread-11] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] 01:24:21,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:24:21,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-27_01-24-21.log] [testng] 01:24:21,284 |-INFO in ch.qos.logback.core.sift.SiftProcessor@443fd9b3 - End of configuration. [testng] [2024-05-27 01:24:21,321] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] 01:24:21,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:24:21,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,322 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-27_01-24-21.log] [testng] 01:24:21,322 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d594042 - End of configuration. [testng] [2024-05-27 01:24:21,357] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] 01:24:21,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:24:21,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-27_01-24-21.log] [testng] 01:24:21,359 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54cd5668 - End of configuration. [testng] [2024-05-27 01:24:21,412] [pool-1-thread-8] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] 01:24:21,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:24:21,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,413 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-27_01-24-21.log] [testng] 01:24:21,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f6f4d63 - End of configuration. [testng] [2024-05-27 01:24:21,454] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] 01:24:21,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:24:21,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,455 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-27_01-24-21.log] [testng] 01:24:21,455 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11d23a41 - End of configuration. [testng] [2024-05-27 01:24:21,487] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern2.tif: [testng] 01:24:21,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:24:21,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,488 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-27_01-24-21.log] [testng] 01:24:21,488 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6cec595b - End of configuration. [testng] [2024-05-27 01:24:21,552] [pool-1-thread-5] Initializing /data/kevino/_BF_00005.tif: [testng] 01:24:21,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:24:21,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,553 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-27_01-24-21.log] [testng] 01:24:21,553 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f095d32 - End of configuration. [testng] [2024-05-27 01:24:21,600] [pool-1-thread-4] Initializing /data/misc/9 h test.tif: [testng] 01:24:21,601 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:24:21,601 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,601 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-27_01-24-21.log] [testng] 01:24:21,602 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3dd59aa7 - End of configuration. [testng] [2024-05-27 01:24:21,626] [pool-1-thread-3] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] 01:24:21,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:24:21,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,627 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-27_01-24-21.log] [testng] 01:24:21,627 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55fb3a5f - End of configuration. [testng] [2024-05-27 01:24:21,702] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern9.tif: [testng] 01:24:21,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:24:21,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:21,704 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-27_01-24-21.log] [testng] 01:24:21,704 |-INFO in ch.qos.logback.core.sift.SiftProcessor@388b9ab8 - End of configuration. [testng] [2024-05-27 01:24:24,531] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z014.tif: [testng] [2024-05-27 01:24:24,558] [pool-1-thread-4] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-05-27 01:24:24,587] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-05-27 01:24:24,628] [pool-1-thread-2] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-05-27 01:24:24,658] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-05-27 01:24:24,707] [pool-1-thread-8] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-05-27 01:24:26,794] [pool-1-thread-11] Initializing /data/jay/10-crop-Stack.tif: [testng] [2024-05-27 01:24:26,906] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z052.tif: [testng] [2024-05-27 01:24:26,938] [pool-1-thread-10] Initializing /data/stephane/d01&007.tif: [testng] [2024-05-27 01:24:26,984] [pool-1-thread-6] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-05-27 01:24:27,584] [pool-1-thread-10] Initializing /data/josiah/cell-Z21.C1.tiff: [testng] [2024-05-27 01:24:27,656] [pool-1-thread-9] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-05-27 01:24:27,860] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-05-27 01:24:28,059] [pool-1-thread-2] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-05-27 01:24:28,174] [pool-1-thread-7] Initializing /data/jeff/test36b.tif: [testng] [2024-05-27 01:24:28,369] [pool-1-thread-11] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-05-27 01:24:28,488] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-05-27 01:24:28,552] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z063.tif: [testng] [2024-05-27 01:24:28,770] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0226.TIF: [testng] [2024-05-27 01:24:28,837] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-05-27 01:24:29,009] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-05-27 01:24:29,080] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z024.tif: [testng] [2024-05-27 01:24:29,224] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-05-27 01:24:29,303] [pool-1-thread-1] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-05-27 01:24:29,360] [pool-1-thread-5] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-05-27 01:24:29,387] [pool-1-thread-4] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-05-27 01:24:30,309] [pool-1-thread-2] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-05-27 01:24:30,412] [pool-1-thread-6] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-05-27 01:24:30,531] [pool-1-thread-9] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-05-27 01:24:30,633] [pool-1-thread-12] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-05-27 01:24:30,811] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-05-27 01:24:30,854] [pool-1-thread-5] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-05-27 01:24:30,941] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-05-27 01:24:31,236] [pool-1-thread-9] Initializing /data/public/libtiff/jim___cg.tif: [testng] [2024-05-27 01:24:31,430] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-05-27 01:24:31,519] [pool-1-thread-1] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-05-27 01:24:31,587] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-05-27 01:24:31,673] [pool-1-thread-6] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-05-27 01:24:32,001] [pool-1-thread-4] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-05-27 01:24:32,053] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-05-27 01:24:32,349] [pool-1-thread-7] Initializing /data/qa-5004/ID4118_21_uncuff_10x_HE.tif: [testng] [2024-05-27 01:24:32,645] [pool-1-thread-10] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-05-27 01:24:32,928] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0209.TIF: [testng] [2024-05-27 01:24:32,973] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-05-27 01:24:33,187] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] [2024-05-27 01:24:33,235] [pool-1-thread-6] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-05-27 01:24:33,299] [pool-1-thread-9] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-05-27 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/data/kelsey/Live-Dead Assay 4000 nm pitch PU.TIF: [testng] [2024-05-27 01:26:57,675] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z035.tif: [testng] [2024-05-27 01:26:57,936] [pool-1-thread-1] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-05-27 01:26:58,026] [pool-1-thread-2] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-05-27 01:26:58,159] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-05-27 01:26:58,186] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-05-27 01:26:58,476] [pool-1-thread-11] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-05-27 01:26:58,612] [pool-1-thread-12] Initializing /data/public/condensation/C4.pattern2.tif: [testng] [2024-05-27 01:26:58,924] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-05-27 01:26:59,184] [pool-1-thread-7] Initializing 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/data/brian/retina/retina_C0_Z035.tif: [testng] [2024-05-27 01:27:01,655] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] [2024-05-27 01:27:02,025] [pool-1-thread-4] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-05-27 01:27:02,071] [pool-1-thread-7] Initializing /data/misc/mri-stack.tif: [testng] [2024-05-27 01:27:02,186] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-05-27 01:27:02,207] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-05-27 01:27:02,254] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-05-27 01:27:02,568] [pool-1-thread-12] Initializing /data/stephane/d02&007.tif: [testng] [2024-05-27 01:27:02,590] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0222.TIF: [testng] [2024-05-27 01:27:02,690] [pool-1-thread-7] Initializing /data/josh/NESb_C2_TP9.tiff: [testng] [2024-05-27 01:27:02,813] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x64.tiff: [testng] [2024-05-27 01:27:03,078] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z000.tif: [testng] [2024-05-27 01:27:03,354] [pool-1-thread-12] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-05-27 01:27:03,433] [pool-1-thread-10] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-05-27 01:27:03,545] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z025.tif: [testng] [2024-05-27 01:27:03,764] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-05-27 01:27:03,792] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-05-27 01:27:03,880] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-05-27 01:27:03,980] [pool-1-thread-10] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-05-27 01:27:04,049] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0217.TIF: [testng] [2024-05-27 01:27:04,101] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-05-27 01:27:04,181] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-05-27 01:27:04,320] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-05-27 01:27:04,451] [pool-1-thread-11] Initializing /data/josiah/cell-Z14.C1.tiff: [testng] [2024-05-27 01:27:04,554] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-05-27 01:27:04,617] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-05-27 01:27:04,759] [pool-1-thread-9] Initializing /data/curtis/imagesEight.tiff: [testng] [2024-05-27 01:27:04,900] [pool-1-thread-12] Initializing /data/stephane/001_z01.tif: [testng] [2024-05-27 01:27:04,953] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-05-27 01:27:05,001] [pool-1-thread-6] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-05-27 01:27:05,829] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x16.tiff: [testng] [2024-05-27 01:27:05,969] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-05-27 01:27:06,370] [pool-1-thread-7] Initializing /data/qa-4833/cjw_tiffs/23273992_Figure 6_NA_NA_22159.TIF: [testng] [2024-05-27 01:27:06,603] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-05-27 01:27:06,649] [pool-1-thread-9] Initializing /data/tom-kazimiers/crop_two_chan.tiff: [testng] [2024-05-27 01:27:06,725] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-05-27 01:27:06,862] [pool-1-thread-8] Initializing /data/curtis/test1.tiff: [testng] [2024-05-27 01:27:06,981] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] [2024-05-27 01:27:07,049] [pool-1-thread-5] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina.tif: [testng] [2024-05-27 01:27:07,112] [pool-1-thread-9] Initializing /data/alexa/test4.tif: [testng] [2024-05-27 01:27:07,319] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z014.tif: [testng] [2024-05-27 01:27:07,395] [pool-1-thread-11] Initializing /data/ascb/bad/CYT-76_PasolliMouse1_4800.tif: [testng] [2024-05-27 01:27:07,558] [pool-1-thread-9] Initializing /data/julien/baldinsug1LMP2col.TIF: [testng] [2024-05-27 01:27:07,607] [pool-1-thread-12] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-05-27 01:27:07,765] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0231.TIF: [testng] [2024-05-27 01:27:07,970] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-05-27 01:27:08,128] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-05-27 01:27:08,255] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z004.tif: [testng] [2024-05-27 01:27:08,342] [pool-1-thread-10] Initializing /data/misc/mri.avi: [testng] [2024-05-27 01:27:08,496] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-05-27 01:27:08,569] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z043.tif: [testng] [2024-05-27 01:27:08,701] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-05-27 01:27:08,765] [pool-1-thread-9] Initializing /data/josiah/cell-Z1.C1.tiff: [testng] [2024-05-27 01:27:08,809] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-05-27 01:27:08,849] [pool-1-thread-8] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-05-27 01:27:08,979] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-05-27 01:27:09,170] [pool-1-thread-12] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-05-27 01:27:09,411] [pool-1-thread-7] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-05-27 01:27:09,542] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-05-27 01:27:09,652] [pool-1-thread-4] Initializing /data/public/libtiff/jim___dg.tif: [testng] [2024-05-27 01:27:09,998] [pool-1-thread-10] Initializing /data/josiah/cell-Z23.C0.tiff: [testng] [2024-05-27 01:27:10,044] [pool-1-thread-5] Initializing /data/johan/Test1_12.tif: [testng] [2024-05-27 01:27:10,346] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-05-27 01:27:10,446] [pool-1-thread-4] Initializing /data/tamjid/10_para-stage 1.tiff: [testng] [2024-05-27 01:27:10,507] [pool-1-thread-9] Initializing /data/paulh/quickpollen4_w1_t1.tif: [testng] [2024-05-27 01:27:10,622] [pool-1-thread-8] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-05-27 01:27:10,653] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-05-27 01:27:10,684] [pool-1-thread-7] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-05-27 01:27:11,273] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-05-27 01:27:11,299] [pool-1-thread-8] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] [2024-05-27 01:27:11,351] [pool-1-thread-10] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-05-27 01:27:11,549] [pool-1-thread-4] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-05-27 01:27:11,635] [pool-1-thread-9] Initializing /data/curtis/test2.tiff: [testng] [2024-05-27 01:27:11,867] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-05-27 01:27:12,046] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-05-27 01:27:12,190] [pool-1-thread-12] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-05-27 01:27:12,471] [pool-1-thread-4] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-05-27 01:27:14,723] [pool-1-thread-1] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-05-27 01:27:14,754] [pool-1-thread-3] Initializing /data/ascb/FND-27_PaladeGolgi_4800.tif: [testng] [2024-05-27 01:27:14,851] [pool-1-thread-8] Initializing /data/ascb/FND-26a_PaladeGlycogenLabeled_4800.tif: [testng] [2024-05-27 01:27:18,037] [pool-1-thread-10] Initializing /data/boguslaw/Rab582 3d det gfapBrdUmib1z24Live9-14-2007_11-55-58_AM copy.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 52 seconds Finished: SUCCESS