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Started by upstream project "BIOFORMATS-test-repo" build number 76 originally caused by: Started by upstream project "Trigger" build number 84 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins3934113611407497903.sh + '[' fluoview = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_11552_merge_ci -v /uod/idr/repos/curated/fluoview:/data -v /uod/idr-scratch/merge-ci/curated/fluoview:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:13:57,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:13:57,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:13:57,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:13:57,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:13:57,456 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:13:57,457 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:13:57,457 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:13:57,457 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:13:57,457 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:13:57,458 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:13:57,458 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 639 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-27 02:13:57,491] [main] java.version = 1.8.0_342 [testng] 02:13:57,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:13:57,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:57,572 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-27_02-13-57.log] [testng] 02:13:57,575 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-05-27 02:13:57,578] [main] testng.directory = /data [testng] [2024-05-27 02:13:57,578] [main] testng.configDirectory = /config [testng] [2024-05-27 02:13:57,717] [main] testng.multiplier = 1.0 [testng] [2024-05-27 02:13:57,718] [main] testng.in-memory = false [testng] [2024-05-27 02:13:57,718] [main] testng.allow-missing = false [testng] [2024-05-27 02:13:57,718] [main] user.language = fr [testng] [2024-05-27 02:13:57,718] [main] user.country = FR [testng] [2024-05-27 02:13:57,719] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-05-27 02:13:58,959] [main] ---------------------------------------- [testng] [2024-05-27 02:13:58,959] [main] Total files: 14 [testng] [2024-05-27 02:13:58,959] [main] Scan time: 1.24 s (88 ms/file) [testng] [2024-05-27 02:13:58,960] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 13 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-27 02:14:05,501] [pool-1-thread-1] Initializing /data/aaron/olympus_fv500.tif: [testng] 02:14:05,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:14:05,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:05,502 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-27_02-14-05.log] [testng] 02:14:05,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dce9069 - End of configuration. [testng] [2024-05-27 02:14:05,641] [pool-1-thread-12] Initializing /data/timg/eric-three.tif: [testng] 02:14:05,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:14:05,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:05,642 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-27_02-14-05.log] [testng] 02:14:05,643 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22288999 - End of configuration. [testng] [2024-05-27 02:14:05,721] [pool-1-thread-11] Initializing /data/brian/DBTRG 2X 1a-1_DSP.TIF: [testng] 02:14:05,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:14:05,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:05,722 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-27_02-14-05.log] [testng] 02:14:05,723 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49a3e489 - End of configuration. [testng] [2024-05-27 02:14:05,802] [pool-1-thread-10] Initializing /data/timg/eric-one-3d.tif: [testng] 02:14:05,802 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:14:05,802 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:05,803 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-27_02-14-05.log] [testng] 02:14:05,803 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6989bc3a - End of configuration. [testng] [2024-05-27 02:14:05,895] [pool-1-thread-9] Initializing /data/timg/eric-three-projection.tif: [testng] 02:14:05,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:14:05,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:05,897 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-27_02-14-05.log] [testng] 02:14:05,898 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2afbab0a - End of configuration. [testng] [2024-05-27 02:14:05,963] [pool-1-thread-8] Initializing /data/timg/LiveTwo.tif: [testng] 02:14:05,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:14:05,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:05,964 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-27_02-14-05.log] [testng] 02:14:05,964 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a868f56 - End of configuration. [testng] [2024-05-27 02:14:06,057] [pool-1-thread-7] Initializing /data/timg/LiveThree-xyzt.tif: [testng] 02:14:06,057 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:14:06,057 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:06,058 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-27_02-14-06.log] [testng] 02:14:06,059 |-INFO in ch.qos.logback.core.sift.SiftProcessor@737269b - End of configuration. [testng] [2024-05-27 02:14:06,146] [pool-1-thread-6] Initializing /data/jae/BrdU.1c-1.z.Live1-25-2005_11-58-40_AM.tif: [testng] 02:14:06,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:14:06,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:06,146 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-27_02-14-06.log] [testng] 02:14:06,147 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f514211 - End of configuration. [testng] [2024-05-27 02:14:06,180] [pool-1-thread-5] Initializing /data/timg/E1-v2(11 som).tif: [testng] 02:14:06,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:14:06,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:06,181 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-27_02-14-06.log] [testng] 02:14:06,182 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5357e129 - End of configuration. [testng] [2024-05-27 02:14:06,269] [pool-1-thread-4] Initializing /data/brian/DBTRG 2X 1a-1.tif: [testng] 02:14:06,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:14:06,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:06,270 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-27_02-14-06.log] [testng] 02:14:06,271 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b0e9bdb - End of configuration. [testng] [2024-05-27 02:14:06,362] [pool-1-thread-3] Initializing /data/shalin/40xNA0.6-512x512.tif: [testng] 02:14:06,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:14:06,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:06,363 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-27_02-14-06.log] [testng] 02:14:06,364 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57434933 - End of configuration. [testng] [2024-05-27 02:14:06,482] [pool-1-thread-2] Initializing /data/timg/LiveOne.tif: [testng] 02:14:06,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:14:06,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:06,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-27_02-14-06.log] [testng] 02:14:06,483 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7771c506 - End of configuration. [testng] [2024-05-27 02:14:09,853] [pool-1-thread-6] Initializing /data/timg/eric-one.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 689, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 21 seconds Finished: SUCCESS