![[Jenkins]](/jenkins/static/0ce0ee70/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 78 originally caused by: Started by upstream project "Trigger" build number 86 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins4767007492218960007.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_11792_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:39,287 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:39,288 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:21:39,288 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:39,289 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:39,290 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:39,290 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:39,290 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:39,290 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:39,291 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:39,291 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:39,291 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:39,292 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:39,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:39,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:39,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:39,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:39,507 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:39,507 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:39,507 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:39,508 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:39,508 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:21:39,509 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:21:39,509 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 218 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-29 01:21:39,518] [main] java.version = 17.0.2 [testng] 01:21:39,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:39,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:39,563 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-29_01-21-39.log] [testng] 01:21:39,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-05-29 01:21:39,567] [main] testng.directory = /data [testng] [2024-05-29 01:21:39,567] [main] testng.configDirectory = /config [testng] [2024-05-29 01:21:39,576] [main] testng.multiplier = 1.0 [testng] [2024-05-29 01:21:39,577] [main] testng.in-memory = false [testng] [2024-05-29 01:21:39,577] [main] testng.allow-missing = false [testng] [2024-05-29 01:21:39,577] [main] user.language = en [testng] [2024-05-29 01:21:39,577] [main] user.country = ${user.country} [testng] [2024-05-29 01:21:39,577] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-29 01:21:54,146] [main] ---------------------------------------- [testng] [2024-05-29 01:21:54,147] [main] Total files: 283 [testng] [2024-05-29 01:21:54,147] [main] Scan time: 14.569 s (51 ms/file) [testng] [2024-05-29 01:21:54,147] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-29 01:29:42,594] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:29:42,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:29:42,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:42,595 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-29_01-29-42.log] [testng] 01:29:42,596 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18e9c53a - End of configuration. [testng] [2024-05-29 01:29:42,639] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] 01:29:42,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:29:42,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:42,640 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-29_01-29-42.log] [testng] 01:29:42,640 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7676f98e - End of configuration. [testng] [2024-05-29 01:29:42,729] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] 01:29:42,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:29:42,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:42,730 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-29_01-29-42.log] [testng] 01:29:42,730 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70b333e5 - End of configuration. [testng] [2024-05-29 01:29:42,797] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] 01:29:42,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:29:42,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:42,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-29_01-29-42.log] [testng] 01:29:42,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49928bd8 - End of configuration. [testng] [2024-05-29 01:29:42,882] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] 01:29:42,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:29:42,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:42,883 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-29_01-29-42.log] [testng] 01:29:42,883 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36a1886f - End of configuration. [testng] [2024-05-29 01:29:42,961] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir: [testng] 01:29:42,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:29:42,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:42,962 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-29_01-29-42.log] [testng] 01:29:42,962 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55c02bc4 - End of configuration. [testng] [2024-05-29 01:29:43,016] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: [testng] 01:29:43,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:29:43,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:43,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-29_01-29-43.log] [testng] 01:29:43,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79a1164e - End of configuration. [testng] [2024-05-29 01:29:59,018] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] 01:29:59,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:29:59,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:59,020 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-29_01-29-59.log] [testng] 01:29:59,020 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e9e3b5b - End of configuration. [testng] [2024-05-29 01:29:59,069] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:29:59,069 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:29:59,069 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:59,070 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-29_01-29-59.log] [testng] 01:29:59,070 |-INFO in ch.qos.logback.core.sift.SiftProcessor@88adb27 - End of configuration. [testng] [2024-05-29 01:29:59,089] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] 01:29:59,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:29:59,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:59,090 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-29_01-29-59.log] [testng] 01:29:59,090 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fe2e64c - End of configuration. [testng] [2024-05-29 01:29:59,181] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] 01:29:59,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:29:59,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:59,182 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-29_01-29-59.log] [testng] 01:29:59,183 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a3c18ed - End of configuration. [testng] [2024-05-29 01:29:59,242] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] 01:29:59,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:29:59,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:59,244 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-29_01-29-59.log] [testng] 01:29:59,244 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f684d85 - End of configuration. [testng] [2024-05-29 01:30:01,547] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-05-29 01:30:01,787] [pool-1-thread-4] Initializing /data/qa-17270/stack1.oir: [testng] [2024-05-29 01:30:03,087] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-05-29 01:30:03,273] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-05-29 01:30:03,641] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-05-29 01:30:03,726] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-05-29 01:30:03,773] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-05-29 01:30:03,797] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-05-29 01:30:03,878] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-05-29 01:30:04,179] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-05-29 01:30:05,453] [pool-1-thread-10] Initializing /data/olympus/XYZt.vsi: [testng] [2024-05-29 01:30:05,565] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-05-29 01:30:05,640] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-05-29 01:30:05,764] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-05-29 01:30:05,912] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-05-29 01:30:06,042] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-05-29 01:30:06,118] [pool-1-thread-8] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-05-29 01:30:50,999] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-05-29 01:30:51,117] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-05-29 01:30:51,761] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-05-29 01:30:51,873] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-05-29 01:30:52,031] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-05-29 01:30:52,167] [pool-1-thread-11] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-05-29 01:30:52,261] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2024-05-29 01:30:52,598] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2024-05-29 01:30:52,814] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-05-29 01:30:53,122] [pool-1-thread-10] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-05-29 01:30:57,434] [pool-1-thread-6] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-05-29 01:30:57,809] [pool-1-thread-2] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-05-29 01:30:57,954] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-05-29 01:30:58,022] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-05-29 01:30:58,293] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-05-29 01:30:58,906] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2024-05-29 01:30:59,729] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-05-29 01:31:00,762] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-05-29 01:31:01,223] [pool-1-thread-3] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-05-29 01:31:01,353] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-05-29 01:31:01,527] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-05-29 01:31:01,751] [pool-1-thread-1] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-05-29 01:31:02,362] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-05-29 01:31:02,880] [pool-1-thread-5] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-05-29 01:31:03,254] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-05-29 01:31:03,544] [pool-1-thread-9] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-05-29 01:31:03,601] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-05-29 01:31:04,024] [pool-1-thread-3] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-05-29 01:31:04,285] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-05-29 01:31:04,711] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-05-29 01:31:04,982] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-05-29 01:31:05,049] [pool-1-thread-9] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-05-29 01:31:05,286] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-05-29 01:31:05,529] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2024-05-29 01:31:05,606] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-05-29 01:31:05,715] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-05-29 01:31:05,902] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-05-29 01:31:06,447] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-05-29 01:31:06,739] [pool-1-thread-5] Initializing /data/qa-17917/f10010.oir: [testng] [2024-05-29 01:31:31,497] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-05-29 01:31:31,875] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2024-05-29 01:31:32,130] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] [2024-05-29 01:31:32,409] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-05-29 01:31:32,483] [pool-1-thread-1] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-05-29 01:31:33,508] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2024-05-29 01:31:33,649] [pool-1-thread-12] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-05-29 01:31:34,602] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-05-29 01:31:34,675] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-05-29 01:31:34,793] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-05-29 01:31:35,059] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2024-05-29 01:31:35,179] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-05-29 01:31:35,631] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2024-05-29 01:31:36,241] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-05-29 01:31:36,364] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-05-29 01:31:36,425] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-05-29 01:31:36,504] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-05-29 01:31:36,561] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-05-29 01:31:36,980] [pool-1-thread-2] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-05-29 01:31:38,042] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-05-29 01:31:38,218] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-05-29 01:31:38,345] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-05-29 01:31:38,404] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-05-29 01:31:38,516] [pool-1-thread-4] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2024-05-29 01:31:39,058] [pool-1-thread-3] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-05-29 01:31:39,287] [pool-1-thread-11] Initializing /data/qa-17335/1.oir: [testng] [2024-05-29 01:31:39,492] [pool-1-thread-9] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-05-29 01:31:39,696] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-05-29 01:31:39,811] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-05-29 01:31:40,019] [pool-1-thread-4] Initializing /data/olympus/XYZt.oir: [testng] [2024-05-29 01:31:41,434] [pool-1-thread-11] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2024-05-29 01:31:41,867] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-05-29 01:31:42,001] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-05-29 01:31:42,349] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-05-29 01:31:42,896] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-05-29 01:31:43,088] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-05-29 01:32:01,759] [pool-1-thread-3] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-05-29 01:32:05,269] [pool-1-thread-1] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-05-29 01:32:05,738] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-05-29 01:32:06,104] [pool-1-thread-12] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-05-29 01:32:06,219] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-05-29 01:32:06,329] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-05-29 01:32:06,628] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-05-29 01:32:07,314] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-05-29 01:32:07,660] [pool-1-thread-2] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-05-29 01:32:07,809] [pool-1-thread-12] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2024-05-29 01:32:08,233] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-05-29 01:32:08,533] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-05-29 01:32:09,020] [pool-1-thread-1] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-05-29 01:32:09,095] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-05-29 01:32:09,549] [pool-1-thread-2] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2024-05-29 01:32:10,098] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-05-29 01:32:10,818] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-05-29 01:32:11,463] [pool-1-thread-4] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-05-29 01:32:11,520] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-05-29 01:32:11,896] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2024-05-29 01:32:11,976] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-05-29 01:32:12,890] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-05-29 01:32:12,991] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-05-29 01:32:13,223] [pool-1-thread-2] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-05-29 01:32:13,293] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-05-29 01:32:14,196] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-05-29 01:32:14,516] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2024-05-29 01:32:14,578] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-05-29 01:32:14,661] [pool-1-thread-9] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-05-29 01:32:15,022] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2024-05-29 01:32:15,238] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-05-29 01:32:15,898] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-05-29 01:32:16,025] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2024-05-29 01:32:16,201] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-05-29 01:32:16,301] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-05-29 01:32:16,640] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-05-29 01:32:16,762] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-05-29 01:32:17,191] [pool-1-thread-1] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-05-29 01:32:17,597] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2024-05-29 01:32:20,317] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2024-05-29 01:32:20,398] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-05-29 01:32:20,621] [pool-1-thread-9] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-05-29 01:32:20,773] [pool-1-thread-12] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-05-29 01:32:20,938] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-05-29 01:32:21,753] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2024-05-29 01:32:21,827] [pool-1-thread-2] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-05-29 01:32:22,204] [pool-1-thread-9] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-05-29 01:32:22,682] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-05-29 01:32:22,885] [pool-1-thread-1] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-05-29 01:32:23,653] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2024-05-29 01:32:23,915] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-05-29 01:32:27,881] [pool-1-thread-9] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-05-29 01:32:27,938] [pool-1-thread-1] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-05-29 01:32:28,857] [pool-1-thread-6] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-05-29 01:32:29,072] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-05-29 01:32:29,350] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-05-29 01:32:29,414] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-05-29 01:32:30,235] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-05-29 01:32:30,712] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2024-05-29 01:32:30,795] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-05-29 01:32:31,586] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2024-05-29 01:32:32,272] [pool-1-thread-2] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-05-29 01:32:32,490] [pool-1-thread-6] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-05-29 01:32:32,666] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-05-29 01:32:34,747] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2024-05-29 01:32:35,180] [pool-1-thread-2] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-05-29 01:32:35,397] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-05-29 01:32:36,375] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-05-29 01:32:36,629] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-05-29 01:32:39,596] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-05-29 01:32:41,566] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-05-29 01:32:41,641] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-05-29 01:32:42,676] [pool-1-thread-3] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-05-29 01:32:44,048] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-05-29 01:32:44,207] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2024-05-29 01:32:44,594] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-05-29 01:32:45,959] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-05-29 01:32:46,624] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-05-29 01:32:47,163] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-05-29 01:32:47,941] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-05-29 01:32:48,591] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-05-29 01:32:49,599] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 40 minutes 48 seconds Finished: SUCCESS