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Started by upstream project "BIOFORMATS-test-repo" build number 79 originally caused by: Started by upstream project "Trigger" build number 87 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins14021192057692293142.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_11948_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:35,030 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:35,031 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 01:21:35,031 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:35,032 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:35,033 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:35,033 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:35,033 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:35,033 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:35,034 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:35,034 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:35,035 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:35,035 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:35,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:35,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:35,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:35,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:35,222 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:35,222 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:35,222 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:35,223 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:35,223 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 01:21:35,223 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 01:21:35,224 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 190 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-30 01:21:35,232] [main] java.version = 21 [testng] 01:21:35,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:35,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:35,275 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-30_01-21-35.log] [testng] 01:21:35,277 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-05-30 01:21:35,278] [main] testng.directory = /data [testng] [2024-05-30 01:21:35,279] [main] testng.configDirectory = /config [testng] [2024-05-30 01:21:35,287] [main] testng.multiplier = 1.0 [testng] [2024-05-30 01:21:35,288] [main] testng.in-memory = false [testng] [2024-05-30 01:21:35,288] [main] testng.allow-missing = false [testng] [2024-05-30 01:21:35,288] [main] user.language = en [testng] [2024-05-30 01:21:35,288] [main] user.country = ${user.country} [testng] [2024-05-30 01:21:35,288] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-30 01:21:36,235] [main] ---------------------------------------- [testng] [2024-05-30 01:21:36,235] [main] Total files: 103 [testng] [2024-05-30 01:21:36,235] [main] Scan time: 0.947 s (9 ms/file) [testng] [2024-05-30 01:21:36,236] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-30 01:21:43,676] [pool-1-thread-1] Initializing /data/jay/dnasample.tif: [testng] 01:21:43,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:43,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,679 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-30_01-21-43.log] [testng] 01:21:43,680 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19ff0826 - End of configuration. [testng] [2024-05-30 01:21:43,749] [pool-1-thread-12] Initializing /data/jay/DMtest2.dm3: [testng] 01:21:43,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:43,750 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,751 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-30_01-21-43.log] [testng] 01:21:43,751 |-INFO in ch.qos.logback.core.sift.SiftProcessor@159eda54 - End of configuration. [testng] [2024-05-30 01:21:43,797] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 01:21:43,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:43,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,799 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-30_01-21-43.log] [testng] 01:21:43,799 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37b8ff02 - End of configuration. [testng] [2024-05-30 01:21:43,820] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] 01:21:43,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:43,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,821 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-30_01-21-43.log] [testng] 01:21:43,822 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d30f7c5 - End of configuration. [testng] [2024-05-30 01:21:43,846] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] 01:21:43,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:43,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,849 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-30_01-21-43.log] [testng] 01:21:43,850 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e5550d6 - End of configuration. [testng] [2024-05-30 01:21:43,880] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] 01:21:43,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:43,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-30_01-21-43.log] [testng] 01:21:43,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f6249c - End of configuration. [testng] [2024-05-30 01:21:44,099] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] 01:21:44,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:44,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:44,102 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-30_01-21-44.log] [testng] 01:21:44,102 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bbf2160 - End of configuration. [testng] [2024-05-30 01:21:44,369] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] 01:21:44,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:44,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:44,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-30_01-21-44.log] [testng] 01:21:44,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79a7048d - End of configuration. [testng] [2024-05-30 01:21:44,408] [pool-1-thread-5] Initializing /data/qa-7642/8.dm4: [testng] 01:21:44,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:44,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:44,409 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-30_01-21-44.log] [testng] 01:21:44,410 |-INFO in ch.qos.logback.core.sift.SiftProcessor@230e5553 - End of configuration. [testng] [2024-05-30 01:21:44,431] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] 01:21:44,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:44,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:44,433 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-30_01-21-44.log] [testng] 01:21:44,433 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cc1590e - End of configuration. [testng] [2024-05-30 01:21:44,465] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] 01:21:44,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:44,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:44,466 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-30_01-21-44.log] [testng] 01:21:44,467 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1acb2049 - End of configuration. [testng] [2024-05-30 01:21:44,481] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 01:21:44,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:44,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:44,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-30_01-21-44.log] [testng] 01:21:44,482 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29f6bc17 - End of configuration. [testng] [2024-05-30 01:21:46,630] [pool-1-thread-10] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-05-30 01:21:46,644] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-05-30 01:21:47,023] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-05-30 01:21:47,123] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-05-30 01:21:47,185] [pool-1-thread-10] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-05-30 01:21:47,782] [pool-1-thread-5] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-05-30 01:21:47,811] [pool-1-thread-2] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-05-30 01:21:48,028] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-05-30 01:21:48,485] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-05-30 01:21:48,496] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-05-30 01:21:48,764] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-05-30 01:21:48,796] [pool-1-thread-3] Initializing /data/samples/test-tiles.dm3: [testng] [2024-05-30 01:21:48,917] [pool-1-thread-9] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-05-30 01:21:49,127] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-05-30 01:21:49,172] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-05-30 01:21:51,392] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-05-30 01:21:52,874] [pool-1-thread-3] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-05-30 01:21:53,303] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-05-30 01:21:53,458] [pool-1-thread-3] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-05-30 01:21:53,877] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-05-30 01:21:53,910] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-05-30 01:21:54,130] [pool-1-thread-10] Initializing /data/melissa/annotation-test.tif: [testng] [2024-05-30 01:21:54,259] [pool-1-thread-9] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-05-30 01:21:54,357] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-30 01:21:54,523] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-05-30 01:21:55,262] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-05-30 01:21:55,527] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-05-30 01:21:57,016] [pool-1-thread-6] Initializing /data/jay/camtest1.dm3: [testng] [2024-05-30 01:21:57,961] [pool-1-thread-10] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-05-30 01:21:58,058] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-05-30 01:21:58,833] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-05-30 01:21:58,852] [pool-1-thread-3] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-05-30 01:21:58,985] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-05-30 01:21:59,305] [pool-1-thread-10] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-05-30 01:21:59,656] [pool-1-thread-10] Initializing /data/jay/dnasample1.dm3: [testng] [2024-05-30 01:22:00,136] [pool-1-thread-9] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-05-30 01:22:00,576] [pool-1-thread-4] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-05-30 01:22:00,664] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-05-30 01:22:00,987] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-05-30 01:22:03,001] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-05-30 01:22:03,812] [pool-1-thread-9] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-30 01:22:04,335] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-05-30 01:22:04,795] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-05-30 01:22:04,994] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-05-30 01:22:05,510] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-05-30 01:22:06,551] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-05-30 01:22:07,725] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-05-30 01:22:07,753] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-05-30 01:22:08,163] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-05-30 01:22:09,279] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-05-30 01:22:09,370] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-05-30 01:22:09,657] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-05-30 01:22:09,809] [pool-1-thread-11] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-05-30 01:22:10,030] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-05-30 01:22:10,249] [pool-1-thread-7] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-05-30 01:22:10,434] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-05-30 01:22:10,796] [pool-1-thread-9] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-05-30 01:22:11,028] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-05-30 01:22:11,363] [pool-1-thread-9] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-05-30 01:22:11,491] [pool-1-thread-8] Initializing /data/jay/smallerfile.dm3: [testng] [2024-05-30 01:22:12,017] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-05-30 01:22:12,461] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-05-30 01:22:13,900] [pool-1-thread-7] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-05-30 01:22:14,041] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-05-30 01:22:14,092] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-05-30 01:22:14,126] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-05-30 01:22:14,915] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-05-30 01:22:15,361] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-05-30 01:22:15,641] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-05-30 01:22:16,161] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-05-30 01:22:16,249] [pool-1-thread-9] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-05-30 01:22:16,793] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-05-30 01:22:16,809] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-05-30 01:22:17,006] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-05-30 01:22:17,016] [pool-1-thread-3] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-05-30 01:22:17,957] [pool-1-thread-3] Initializing /data/ofra/lowloss.dm3: [testng] [2024-05-30 01:22:18,117] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-05-30 01:22:18,617] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-05-30 01:22:18,833] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-05-30 01:22:18,910] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-05-30 01:22:18,985] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-05-30 01:22:19,114] [pool-1-thread-4] Initializing /data/jay/DMtest.dm3: [testng] [2024-05-30 01:22:19,281] [pool-1-thread-3] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-05-30 01:22:19,904] [pool-1-thread-5] Initializing /data/qa-21761/example.dm4: [testng] [2024-05-30 01:22:20,084] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-05-30 01:22:20,338] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 58 seconds Finished: SUCCESS