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Started by upstream project "BIOFORMATS-test-repo" build number 80 originally caused by: Started by upstream project "Trigger" build number 88 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins16658350657001831385.sh + '[' apng = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_12236_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:26:27,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:26:27,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:26:27,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:26:27,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:26:27,645 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:26:27,645 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:26:27,646 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:26:27,646 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:26:27,646 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:26:27,647 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:26:27,647 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 440 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-31 02:26:27,658] [main] java.version = 1.8.0_342 [testng] 02:26:27,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:26:27,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:27,732 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-31_02-26-27.log] [testng] 02:26:27,735 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-05-31 02:26:27,737] [main] testng.directory = /data [testng] [2024-05-31 02:26:27,738] [main] testng.configDirectory = /config [testng] [2024-05-31 02:26:27,758] [main] testng.multiplier = 1.0 [testng] [2024-05-31 02:26:27,758] [main] testng.in-memory = false [testng] [2024-05-31 02:26:27,758] [main] testng.allow-missing = false [testng] [2024-05-31 02:26:27,758] [main] user.language = en [testng] [2024-05-31 02:26:27,758] [main] user.country = ${user.country} [testng] [2024-05-31 02:26:27,759] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-05-31 02:26:28,303] [main] ---------------------------------------- [testng] [2024-05-31 02:26:28,304] [main] Total files: 21 [testng] [2024-05-31 02:26:28,304] [main] Scan time: 0.544 s (25 ms/file) [testng] [2024-05-31 02:26:28,304] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-31 02:26:29,732] [pool-1-thread-1] Initializing /data/samples/Sun.png: [testng] 02:26:29,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:26:29,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,733 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-31_02-26-29.log] [testng] 02:26:29,734 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61d3d1f0 - End of configuration. [testng] [2024-05-31 02:26:29,795] [pool-1-thread-12] Initializing /data/samples/atom.png: [testng] 02:26:29,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:26:29,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,797 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-31_02-26-29.log] [testng] 02:26:29,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39be5970 - End of configuration. [testng] [2024-05-31 02:26:29,805] [pool-1-thread-11] Initializing /data/samples/orbit.png: [testng] 02:26:29,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:26:29,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-31_02-26-29.log] [testng] 02:26:29,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bad615d - End of configuration. [testng] [2024-05-31 02:26:29,815] [pool-1-thread-10] Initializing /data/samples/monkey_apng.png: [testng] 02:26:29,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:26:29,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,816 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-31_02-26-29.log] [testng] 02:26:29,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a861750 - End of configuration. [testng] [2024-05-31 02:26:29,834] [pool-1-thread-9] Initializing /data/qa-7473/x.png: [testng] 02:26:29,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:26:29,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-31_02-26-29.log] [testng] 02:26:29,836 |-INFO in ch.qos.logback.core.sift.SiftProcessor@482bf30f - End of configuration. [testng] [2024-05-31 02:26:29,841] [pool-1-thread-8] Initializing /data/samples/william_wong04.png: [testng] 02:26:29,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:26:29,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,842 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-31_02-26-29.log] [testng] 02:26:29,843 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4af52173 - End of configuration. [testng] [2024-05-31 02:26:29,847] [pool-1-thread-7] Initializing /data/samples/daniel_coltri_two.png: [testng] 02:26:29,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:26:29,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,848 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-31_02-26-29.log] [testng] 02:26:29,849 |-INFO in ch.qos.logback.core.sift.SiftProcessor@82e879f - End of configuration. [testng] [2024-05-31 02:26:29,854] [pool-1-thread-6] Initializing /data/qa-7473/n.tif: [testng] 02:26:29,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:26:29,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,855 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-31_02-26-29.log] [testng] 02:26:29,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@788fc68 - End of configuration. [testng] [2024-05-31 02:26:29,881] [pool-1-thread-5] Initializing /data/samples/MoonPhases.png: [testng] 02:26:29,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:26:29,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-31_02-26-29.log] [testng] 02:26:29,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a603d2f - End of configuration. [testng] [2024-05-31 02:26:29,887] [pool-1-thread-4] Initializing /data/samples/joanna_viera01.png: [testng] 02:26:29,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:26:29,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,888 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-31_02-26-29.log] [testng] 02:26:29,888 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a2c15d1 - End of configuration. [testng] [2024-05-31 02:26:29,892] [pool-1-thread-3] Initializing /data/samples/Matrix.png: [testng] 02:26:29,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:26:29,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,893 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-31_02-26-29.log] [testng] 02:26:29,894 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21fbe266 - End of configuration. [testng] [2024-05-31 02:26:29,899] [pool-1-thread-2] Initializing /data/samples/phug_logo.png: [testng] 02:26:29,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:26:29,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:29,900 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-31_02-26-29.log] [testng] 02:26:29,900 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63bd4ac2 - End of configuration. [testng] [2024-05-31 02:26:31,443] [pool-1-thread-9] Initializing /data/samples/william_wong02.png: [testng] [2024-05-31 02:26:31,450] [pool-1-thread-3] Initializing /data/samples/spinfox.png: [testng] [2024-05-31 02:26:31,455] [pool-1-thread-12] Initializing /data/samples/william_wong01.png: [testng] [2024-05-31 02:26:31,461] [pool-1-thread-2] Initializing /data/samples/william_wong05.png: [testng] [2024-05-31 02:26:31,467] [pool-1-thread-1] Initializing /data/colin/test.sfstdge.png: [testng] [2024-05-31 02:26:31,470] [pool-1-thread-11] Initializing /data/samples/daniel_coltri_one.png: [testng] [2024-05-31 02:26:31,477] [pool-1-thread-8] Initializing /data/samples/PhugAnimation3.png: [testng] [2024-05-31 02:26:31,488] [pool-1-thread-5] Initializing /data/samples/chompy2.png: [testng] [2024-05-31 02:26:31,491] [pool-1-thread-10] Initializing /data/samples/StarV838.png: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 8 seconds Finished: SUCCESS