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Started by upstream project "BIOFORMATS-test-repo" build number 81 originally caused by: Started by upstream project "Trigger" build number 89 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins3385953606088474214.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_12284_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:22:17,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:17,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:22:17,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:17,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:17,086 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:17,086 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:17,087 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:17,087 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:17,087 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:17,088 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:17,088 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:17,089 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:17,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:17,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:17,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:17,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:17,327 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:17,327 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:17,327 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:17,328 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:17,328 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:22:17,328 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:22:17,329 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 241 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-01 01:22:17,339] [main] java.version = 11.0.16 [testng] 01:22:17,342 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:17,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,405 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-01_01-22-17.log] [testng] 01:22:17,407 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-06-01 01:22:17,410] [main] testng.directory = /data [testng] [2024-06-01 01:22:17,411] [main] testng.configDirectory = /config [testng] [2024-06-01 01:22:17,426] [main] testng.multiplier = 1.0 [testng] [2024-06-01 01:22:17,427] [main] testng.in-memory = false [testng] [2024-06-01 01:22:17,428] [main] testng.allow-missing = false [testng] [2024-06-01 01:22:17,428] [main] user.language = en [testng] [2024-06-01 01:22:17,428] [main] user.country = ${user.country} [testng] [2024-06-01 01:22:17,428] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-01 01:22:31,650] [main] ---------------------------------------- [testng] [2024-06-01 01:22:31,651] [main] Total files: 283 [testng] [2024-06-01 01:22:31,651] [main] Scan time: 14.222 s (50 ms/file) [testng] [2024-06-01 01:22:31,651] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-01 01:30:39,507] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] 01:30:39,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:30:39,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:39,511 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-01_01-30-39.log] [testng] 01:30:39,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f68b849 - End of configuration. [testng] [2024-06-01 01:30:39,965] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] 01:30:39,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:30:39,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:39,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-01_01-30-39.log] [testng] 01:30:39,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@459f3eb1 - End of configuration. [testng] [2024-06-01 01:30:40,078] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] 01:30:40,078 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:30:40,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:40,079 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-01_01-30-40.log] [testng] 01:30:40,080 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6af47f97 - End of configuration. [testng] [2024-06-01 01:30:40,271] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] 01:30:40,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:30:40,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:40,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-01_01-30-40.log] [testng] 01:30:40,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13654114 - End of configuration. [testng] [2024-06-01 01:30:40,346] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:30:40,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:30:40,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:40,347 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-01_01-30-40.log] [testng] 01:30:40,347 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1589809c - End of configuration. [testng] [2024-06-01 01:30:40,370] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:30:40,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:30:40,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:40,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-01_01-30-40.log] [testng] 01:30:40,371 |-INFO in ch.qos.logback.core.sift.SiftProcessor@153c3e4b - End of configuration. [testng] [2024-06-01 01:30:40,454] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] 01:30:40,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:30:40,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:40,456 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-01_01-30-40.log] [testng] 01:30:40,456 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5655bece - End of configuration. [testng] [2024-06-01 01:30:40,616] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: [testng] 01:30:40,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:30:40,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:40,617 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-01_01-30-40.log] [testng] 01:30:40,617 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32e28d41 - End of configuration. [testng] [2024-06-01 01:30:40,693] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 01:30:40,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:30:40,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:40,694 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-01_01-30-40.log] [testng] 01:30:40,694 |-INFO in ch.qos.logback.core.sift.SiftProcessor@161bf3f0 - End of configuration. [testng] [2024-06-01 01:30:40,759] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] 01:30:40,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:30:40,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:40,760 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-01_01-30-40.log] [testng] 01:30:40,760 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24fcb34a - End of configuration. [testng] [2024-06-01 01:30:46,002] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] 01:30:46,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:30:46,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:46,003 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-01_01-30-46.log] [testng] 01:30:46,004 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f9daf33 - End of configuration. [testng] [2024-06-01 01:30:46,130] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] 01:30:46,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:30:46,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:46,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-01_01-30-46.log] [testng] 01:30:46,131 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a8483e5 - End of configuration. [testng] [2024-06-01 01:30:50,077] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-06-01 01:30:50,151] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-06-01 01:30:50,310] [pool-1-thread-12] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-06-01 01:30:50,515] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-06-01 01:30:50,643] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-06-01 01:30:50,738] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-06-01 01:30:51,419] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-06-01 01:30:51,476] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-06-01 01:30:51,549] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-06-01 01:30:52,107] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-06-01 01:30:52,365] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-06-01 01:30:53,503] [pool-1-thread-2] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-06-01 01:30:53,889] [pool-1-thread-12] Initializing /data/qa-17919/f10187.oir: [testng] [2024-06-01 01:31:11,468] [pool-1-thread-11] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-06-01 01:31:11,856] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-06-01 01:31:11,948] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-06-01 01:31:12,017] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-06-01 01:31:12,247] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-06-01 01:31:12,478] [pool-1-thread-10] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-06-01 01:31:13,064] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi: [testng] [2024-06-01 01:31:13,347] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-06-01 01:31:13,994] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-06-01 01:31:14,136] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-06-01 01:31:14,501] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2024-06-01 01:31:14,576] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-06-01 01:31:14,624] [pool-1-thread-2] Initializing /data/qa-17270/stack1.oir: [testng] [2024-06-01 01:31:16,331] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-06-01 01:31:16,626] [pool-1-thread-5] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-06-01 01:31:21,327] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-06-01 01:31:21,467] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-06-01 01:31:21,674] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-06-01 01:31:21,729] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-06-01 01:31:22,008] [pool-1-thread-8] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-06-01 01:31:22,259] [pool-1-thread-9] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-06-01 01:31:23,024] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-06-01 01:31:23,195] [pool-1-thread-7] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-06-01 01:31:23,386] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-06-01 01:31:23,580] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-06-01 01:31:23,714] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-06-01 01:31:23,997] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-06-01 01:31:24,790] [pool-1-thread-8] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-06-01 01:31:25,625] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-06-01 01:31:25,825] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-06-01 01:31:28,183] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-06-01 01:31:28,330] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-06-01 01:31:28,645] [pool-1-thread-3] Initializing /data/olympus/XYZt.oir: [testng] [2024-06-01 01:31:29,795] [pool-1-thread-9] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-06-01 01:31:30,769] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-06-01 01:31:31,118] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-06-01 01:31:31,312] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2024-06-01 01:31:31,426] [pool-1-thread-9] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-06-01 01:31:31,930] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-06-01 01:31:32,095] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-06-01 01:31:32,286] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-06-01 01:31:32,355] [pool-1-thread-7] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2024-06-01 01:31:32,859] [pool-1-thread-2] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-06-01 01:31:33,369] [pool-1-thread-8] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-06-01 01:31:33,579] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2024-06-01 01:31:34,010] [pool-1-thread-10] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-06-01 01:31:34,098] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2024-06-01 01:31:34,243] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-06-01 01:31:34,551] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-06-01 01:31:37,093] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-06-01 01:31:37,552] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-06-01 01:31:37,752] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-06-01 01:31:38,902] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2024-06-01 01:31:39,014] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-06-01 01:31:39,223] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-06-01 01:31:39,593] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-06-01 01:31:39,996] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-06-01 01:31:40,300] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-06-01 01:31:40,721] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-06-01 01:31:40,902] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-06-01 01:31:41,136] [pool-1-thread-8] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-06-01 01:31:41,550] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-06-01 01:31:42,192] [pool-1-thread-3] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-06-01 01:31:42,932] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-06-01 01:31:43,597] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-06-01 01:31:44,966] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-06-01 01:31:45,565] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-06-01 01:31:46,057] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-06-01 01:31:46,738] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-06-01 01:31:50,541] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-06-01 01:31:50,696] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-06-01 01:31:50,781] [pool-1-thread-8] Initializing 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[2024-06-01 01:31:54,936] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2024-06-01 01:31:55,491] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-06-01 01:31:55,647] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-06-01 01:31:55,932] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-06-01 01:31:58,168] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2024-06-01 01:31:58,375] [pool-1-thread-7] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-06-01 01:32:42,426] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-06-01 01:32:43,495] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2024-06-01 01:32:43,557] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2024-06-01 01:32:44,043] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2024-06-01 01:32:44,261] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-06-01 01:32:44,317] [pool-1-thread-6] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-06-01 01:33:02,771] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-06-01 01:33:03,016] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2024-06-01 01:33:03,578] [pool-1-thread-10] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2024-06-01 01:33:03,806] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-06-01 01:33:03,892] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-06-01 01:33:04,339] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] [2024-06-01 01:33:04,476] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-06-01 01:33:04,982] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-06-01 01:33:05,771] [pool-1-thread-8] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-06-01 01:33:06,232] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-06-01 01:33:06,301] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-06-01 01:33:06,649] [pool-1-thread-11] Initializing /data/qa-17917/f10010.oir: [testng] [2024-06-01 01:33:31,087] [pool-1-thread-2] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-06-01 01:33:31,805] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-06-01 01:33:32,173] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-06-01 01:33:32,232] [pool-1-thread-10] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-06-01 01:33:32,979] [pool-1-thread-4] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-06-01 01:33:33,547] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-06-01 01:33:33,609] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-06-01 01:33:34,602] [pool-1-thread-3] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-06-01 01:33:34,783] [pool-1-thread-10] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-06-01 01:33:35,468] [pool-1-thread-4] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-06-01 01:33:36,931] [pool-1-thread-10] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-06-01 01:33:37,279] [pool-1-thread-3] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-06-01 01:33:37,442] [pool-1-thread-8] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-06-01 01:33:38,597] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-06-01 01:33:38,842] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-06-01 01:33:38,931] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-06-01 01:33:39,914] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-06-01 01:33:40,686] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-06-01 01:33:41,074] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-06-01 01:33:42,088] [pool-1-thread-1] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-06-01 01:33:42,178] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-06-01 01:33:42,246] [pool-1-thread-10] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-06-01 01:33:42,293] [pool-1-thread-8] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-06-01 01:33:43,290] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-06-01 01:33:43,846] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-06-01 01:33:44,173] [pool-1-thread-9] Initializing /data/qa-17335/1.oir: [testng] [2024-06-01 01:33:44,250] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-06-01 01:33:44,479] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-06-01 01:33:44,899] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-06-01 01:33:45,463] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-06-01 01:33:46,015] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-06-01 01:33:46,083] [pool-1-thread-4] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-06-01 01:33:46,361] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-06-01 01:33:46,672] [pool-1-thread-10] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-06-01 01:33:47,247] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-06-01 01:33:47,402] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-06-01 01:33:47,676] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-06-01 01:33:47,980] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-06-01 01:33:48,445] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-06-01 01:33:48,577] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-06-01 01:33:49,013] [pool-1-thread-9] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-06-01 01:33:49,286] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-06-01 01:33:49,787] [pool-1-thread-3] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-06-01 01:33:50,212] [pool-1-thread-4] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-06-01 01:33:50,493] [pool-1-thread-9] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-06-01 01:33:50,794] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-06-01 01:33:50,894] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-06-01 01:33:51,816] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-06-01 01:33:51,917] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-06-01 01:33:52,408] [pool-1-thread-10] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-06-01 01:33:52,898] [pool-1-thread-4] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-06-01 01:33:53,046] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-06-01 01:33:53,296] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-06-01 01:33:57,691] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-06-01 01:33:58,441] [pool-1-thread-10] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-06-01 01:33:58,490] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-06-01 01:33:58,724] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 66 minutes 27 seconds Finished: SUCCESS