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Started by upstream project "BIOFORMATS-test-repo" build number 83 originally caused by: Started by upstream project "Trigger" build number 93 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins13035120456940564505.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_12613_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:49,499 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:49,501 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:21:49,501 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:49,502 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:49,502 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:49,503 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:49,503 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:49,503 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:49,504 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:49,504 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:49,505 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:49,505 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:49,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:49,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:49,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:49,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:49,791 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:49,791 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:49,792 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:49,792 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:49,792 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:21:49,794 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:21:49,794 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 290 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-05 01:21:49,810] [main] java.version = 17.0.2 [testng] 01:21:49,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:49,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:49,883 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-05_01-21-49.log] [testng] 01:21:49,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-06-05 01:21:49,886] [main] testng.directory = /data [testng] [2024-06-05 01:21:49,886] [main] testng.configDirectory = /config [testng] [2024-06-05 01:21:49,895] [main] testng.multiplier = 1.0 [testng] [2024-06-05 01:21:49,896] [main] testng.in-memory = false [testng] [2024-06-05 01:21:49,896] [main] testng.allow-missing = false [testng] [2024-06-05 01:21:49,896] [main] user.language = en [testng] [2024-06-05 01:21:49,896] [main] user.country = ${user.country} [testng] [2024-06-05 01:21:49,896] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-05 01:22:06,512] [main] ---------------------------------------- [testng] [2024-06-05 01:22:06,513] [main] Total files: 4424 [testng] [2024-06-05 01:22:06,513] [main] Scan time: 16.615 s (3 ms/file) [testng] [2024-06-05 01:22:06,513] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-05 01:24:00,796] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z023.tif: [testng] 01:24:00,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:24:00,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:00,797 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-05_01-24-00.log] [testng] 01:24:00,797 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25ca8aa9 - End of configuration. [testng] [2024-06-05 01:24:00,826] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-1/Leica-1-subifds.tiff: [testng] 01:24:00,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:24:00,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:00,827 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-05_01-24-00.log] [testng] 01:24:00,827 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fe126e6 - End of configuration. [testng] [2024-06-05 01:24:00,870] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] 01:24:00,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:24:00,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:00,871 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-05_01-24-00.log] [testng] 01:24:00,872 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39c3abd5 - End of configuration. [testng] [2024-06-05 01:24:00,921] [pool-1-thread-10] Initializing /data/josiah/cell-Z28.C1.tiff: [testng] 01:24:00,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:24:00,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:00,922 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-05_01-24-00.log] [testng] 01:24:00,923 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e543e03 - End of configuration. [testng] [2024-06-05 01:24:00,955] [pool-1-thread-9] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 01:24:00,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:24:00,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:00,956 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-05_01-24-00.log] [testng] 01:24:00,956 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53ea55e7 - End of configuration. [testng] [2024-06-05 01:24:00,988] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0248.TIF: [testng] 01:24:00,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:24:00,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:00,989 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-05_01-24-00.log] [testng] 01:24:00,989 |-INFO in ch.qos.logback.core.sift.SiftProcessor@424a807d - End of configuration. [testng] [2024-06-05 01:24:01,050] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z003.tif: [testng] 01:24:01,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:24:01,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:01,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-05_01-24-01.log] [testng] 01:24:01,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@200b0321 - End of configuration. [testng] [2024-06-05 01:24:01,083] [pool-1-thread-6] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] 01:24:01,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:24:01,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:01,083 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-05_01-24-01.log] [testng] 01:24:01,084 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a0a06f7 - End of configuration. [testng] [2024-06-05 01:24:01,126] [pool-1-thread-5] Initializing /data/ascb/FND-12_PorterFranziniSarcoplasmic_4800.tif: [testng] 01:24:01,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:24:01,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:01,127 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-05_01-24-01.log] [testng] 01:24:01,128 |-INFO in ch.qos.logback.core.sift.SiftProcessor@543d6ad1 - End of configuration. [testng] [2024-06-05 01:24:01,176] [pool-1-thread-4] Initializing /data/marc/ball48_original_10x.tif: [testng] 01:24:01,177 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:24:01,177 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:01,178 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-05_01-24-01.log] [testng] 01:24:01,178 |-INFO in ch.qos.logback.core.sift.SiftProcessor@743dfe83 - End of configuration. [testng] [2024-06-05 01:24:01,204] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z004.tif: [testng] 01:24:01,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:24:01,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:01,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-05_01-24-01.log] [testng] 01:24:01,206 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1587ad00 - End of configuration. [testng] [2024-06-05 01:24:01,236] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] 01:24:01,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:24:01,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:01,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-05_01-24-01.log] [testng] 01:24:01,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58bfd360 - End of configuration. [testng] [2024-06-05 01:24:03,486] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-06-05 01:24:03,509] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-06-05 01:24:03,527] [pool-1-thread-7] Initializing /data/josiah/cell-Z5.C1.tiff: [testng] [2024-06-05 01:24:03,558] [pool-1-thread-3] Initializing /data/curtis/test3.tiff: [testng] [2024-06-05 01:24:03,582] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z040.tif: [testng] [2024-06-05 01:24:03,604] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z063.tif: [testng] [2024-06-05 01:24:03,788] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-06-05 01:24:03,878] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-06-05 01:24:04,023] [pool-1-thread-8] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-06-05 01:24:04,121] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] [2024-06-05 01:24:04,305] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-06-05 01:24:04,378] [pool-1-thread-10] Initializing /data/big-images/2kx2k.tif: [testng] [2024-06-05 01:24:04,436] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-06-05 01:24:04,481] [pool-1-thread-1] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-06-05 01:24:04,519] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0225.TIF: [testng] [2024-06-05 01:24:04,630] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-06-05 01:24:04,652] [pool-1-thread-6] Initializing /data/damian/09m.tiff: [testng] [2024-06-05 01:24:04,947] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z024.tif: [testng] [2024-06-05 01:24:04,970] [pool-1-thread-2] Initializing /data/josiah/cell-Z37.C1.tiff: [testng] [2024-06-05 01:24:05,014] [pool-1-thread-1] Initializing /data/ascb/FND-26_PaladeGlycogen_4800.tif: [testng] [2024-06-05 01:24:05,130] [pool-1-thread-3] Initializing /data/josh/3Aa_C2_TP1.tiff: [testng] [2024-06-05 01:24:05,199] [pool-1-thread-7] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-06-05 01:24:05,333] [pool-1-thread-4] Initializing /data/misc/mri-old.mov: [testng] [2024-06-05 01:24:05,344] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z012.tif: [testng] [2024-06-05 01:24:05,426] [pool-1-thread-11] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-06-05 01:24:05,622] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-06-05 01:24:05,739] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z028.tif: [testng] [2024-06-05 01:24:05,854] [pool-1-thread-4] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-06-05 01:24:06,043] [pool-1-thread-6] Initializing /data/brian/061124MitogreenDIV3Cell2-1 copy.tif: [testng] [2024-06-05 01:24:06,298] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z027.tif: [testng] [2024-06-05 01:24:06,417] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-06-05 01:24:06,475] [pool-1-thread-11] Initializing /data/kelsey/Live-Dead Assay 4000 nm pitch PU.TIF: [testng] [2024-06-05 01:24:06,580] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-02.tiff: [testng] [2024-06-05 01:24:06,639] [pool-1-thread-12] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-06-05 01:24:06,846] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-06-05 01:24:06,924] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-06-05 01:24:07,054] [pool-1-thread-10] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-06-05 01:24:07,143] [pool-1-thread-9] Initializing /data/lzw/test.tif: [testng] [2024-06-05 01:24:07,187] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-06-05 01:24:07,598] [pool-1-thread-6] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-06-05 01:24:07,648] [pool-1-thread-4] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-06-05 01:24:10,480] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z037.tif: [testng] [2024-06-05 01:24:10,528] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0218.TIF: [testng] [2024-06-05 01:24:10,633] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-06-05 01:24:10,759] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-06-05 01:24:10,803] [pool-1-thread-9] Initializing /data/public/condensation/C4.pattern7.tif: [testng] [2024-06-05 01:24:10,863] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] 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01:26:02,291] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z020.tif: [testng] [2024-06-05 01:26:02,355] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-06-05 01:26:02,454] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0237.TIF: [testng] [2024-06-05 01:26:02,595] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z033.tif: [testng] [2024-06-05 01:26:02,635] [pool-1-thread-4] Initializing /data/brian/insight.tiff: [testng] [2024-06-05 01:26:02,754] [pool-1-thread-5] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-06-05 01:26:02,790] [pool-1-thread-12] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-06-05 01:26:02,835] [pool-1-thread-11] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-06-05 01:26:02,977] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-06-05 01:26:03,059] [pool-1-thread-10] Initializing /data/wayne/apple.tif: [testng] [2024-06-05 01:26:03,232] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-06-05 01:26:03,272] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-06-05 01:26:03,332] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z005.tif: [testng] [2024-06-05 01:26:03,354] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z025.tif: [testng] [2024-06-05 01:26:03,522] [pool-1-thread-10] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-06-05 01:26:03,611] [pool-1-thread-11] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-06-05 01:26:03,657] [pool-1-thread-8] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-06-05 01:26:03,788] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-06-05 01:26:03,830] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-06-05 01:26:03,877] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-06-05 01:26:03,989] [pool-1-thread-5] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-06-05 01:26:04,119] [pool-1-thread-10] Initializing /data/martin/tester.tif: [testng] [2024-06-05 01:26:04,268] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-06-05 01:26:04,341] [pool-1-thread-9] Initializing /data/josiah/cell-Z35.C0.tiff: [testng] [2024-06-05 01:26:04,448] [pool-1-thread-3] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-06-05 01:26:04,515] [pool-1-thread-8] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-06-05 01:26:05,437] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-06-05 01:26:05,478] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z034.tif: [testng] [2024-06-05 01:26:05,647] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-06-05 01:26:05,843] [pool-1-thread-12] Initializing /data/ascb/bad/FND-20_FawcettLongitudinalMidpieces_4800.tif: [testng] [2024-06-05 01:26:06,013] [pool-1-thread-11] Initializing /data/ascb/FND-22_FawcettLongitudinalMammalian_4800.tif: [testng] [2024-06-05 01:26:06,150] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-06-05 01:26:06,227] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z010.tif: [testng] [2024-06-05 01:26:06,248] [pool-1-thread-7] Initializing /data/public/libtiff/strike.tif: [testng] [2024-06-05 01:26:06,573] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-06-05 01:26:06,618] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z056.tif: [testng] [2024-06-05 01:26:06,698] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-06-05 01:26:06,901] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-06-05 01:26:06,981] [pool-1-thread-10] Initializing /data/public/condensation/C4.pattern9.tif: [testng] [2024-06-05 01:26:07,055] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-06-05 01:26:07,161] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z013.tif: [testng] [2024-06-05 01:26:07,319] [pool-1-thread-9] Initializing /data/public/condensation/A6.pattern1.tif: [testng] [2024-06-05 01:26:07,424] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-06-05 01:26:07,569] [pool-1-thread-4] Initializing /data/curtis/test1.tiff: [testng] [2024-06-05 01:26:07,634] [pool-1-thread-10] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-06-05 01:26:08,000] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-06-05 01:26:08,097] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-06-05 01:26:08,200] [pool-1-thread-9] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-06-05 01:26:08,560] [pool-1-thread-4] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-06-05 01:26:08,700] [pool-1-thread-9] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-06-05 01:26:08,997] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-06-05 01:26:09,364] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-06-05 01:26:09,665] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0235.TIF: [testng] [2024-06-05 01:26:09,838] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0220.TIF: [testng] [2024-06-05 01:26:10,013] [pool-1-thread-7] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-06-05 01:26:10,457] [pool-1-thread-4] Initializing /data/wayne/northern-8bit.tif: [testng] [2024-06-05 01:26:10,587] [pool-1-thread-7] Initializing /data/glen/6307wmmidb4237m_cmle.tif: [testng] [2024-06-05 01:26:10,755] [pool-1-thread-9] Initializing /data/jae/Second image.tif: [testng] [2024-06-05 01:26:10,952] [pool-1-thread-4] Initializing /data/jayne/Zst_13/WTERZ2_Series13_z000_ch00.tif: [testng] [2024-06-05 01:26:11,235] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z057.tif: [testng] [2024-06-05 01:26:11,354] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-06-05 01:26:11,582] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z043.tif: [testng] [2024-06-05 01:26:11,630] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-06-05 01:26:11,761] [pool-1-thread-7] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-06-05 01:26:11,879] [pool-1-thread-5] Initializing /data/lzw/BoutonVsAxon.tif: [testng] [2024-06-05 01:26:12,147] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-06-05 01:26:12,419] [pool-1-thread-9] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-06-05 01:26:12,529] [pool-1-thread-6] Initializing /data/josiah/cell-Z11.C1.tiff: [testng] [2024-06-05 01:26:12,946] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-06-05 01:26:12,965] [pool-1-thread-9] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-06-05 01:26:12,984] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-06-05 01:26:13,248] [pool-1-thread-6] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-06-05 01:26:13,272] [pool-1-thread-11] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-06-05 01:26:13,329] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0252.TIF: [testng] [2024-06-05 01:26:13,680] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] [2024-06-05 01:26:13,717] [pool-1-thread-11] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-06-05 01:26:13,772] [pool-1-thread-8] Initializing /data/tom-kazimiers/test_exiftool2_resave.tiff: [testng] [2024-06-05 01:26:14,007] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z011.tif: [testng] [2024-06-05 01:26:14,079] [pool-1-thread-6] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-06-05 01:26:16,640] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-06-05 01:26:17,045] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-06-05 01:26:17,177] [pool-1-thread-11] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-06-05 01:26:17,346] [pool-1-thread-5] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-06-05 01:26:17,605] [pool-1-thread-9] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-06-05 01:26:17,631] [pool-1-thread-8] Initializing /data/curtis/test2.tiff: [testng] [2024-06-05 01:26:17,738] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] [2024-06-05 01:26:17,884] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z000.tif: [testng] [2024-06-05 01:26:17,907] [pool-1-thread-11] Initializing /data/josiah/cell-Z8.C1.tiff: [testng] [2024-06-05 01:26:17,931] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-06-05 01:26:18,159] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-06-05 01:26:18,193] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-06-05 01:26:18,304] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z016.tif: [testng] [2024-06-05 01:26:18,334] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z010.tif: [testng] [2024-06-05 01:26:18,460] [pool-1-thread-9] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-06-05 01:26:18,484] [pool-1-thread-5] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-06-05 01:26:18,525] [pool-1-thread-4] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-06-05 01:26:19,989] [pool-1-thread-8] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-06-05 01:26:20,114] [pool-1-thread-11] Initializing /data/curtis/clown.tif: [testng] [2024-06-05 01:26:20,262] [pool-1-thread-9] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-06-05 01:26:20,373] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-06-05 01:26:20,502] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z039.tif: [testng] [2024-06-05 01:26:20,526] [pool-1-thread-5] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-06-05 01:26:20,796] [pool-1-thread-8] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-06-05 01:26:20,847] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z034.tif: [testng] [2024-06-05 01:26:21,083] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0223.TIF: [testng] [2024-06-05 01:26:21,353] [pool-1-thread-8] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-06-05 01:26:21,439] [pool-1-thread-5] Initializing /data/curtis/map/brown-fox: [testng] [2024-06-05 01:26:21,672] [pool-1-thread-5] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-06-05 01:26:21,767] [pool-1-thread-11] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-06-05 01:26:21,812] [pool-1-thread-8] Initializing /data/public/libtiff/quad-tile.tif: [testng] [2024-06-05 01:26:22,170] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-06-05 01:26:22,324] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-06-05 01:26:22,618] [pool-1-thread-5] Initializing /data/ascb/CYT-23_BaintonGlycogenB_4800.tif: [testng] [2024-06-05 01:26:24,963] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0245.TIF: [testng] [2024-06-05 01:26:25,174] [pool-1-thread-8] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-06-05 01:26:25,320] [pool-1-thread-7] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-06-05 01:26:25,469] [pool-1-thread-12] Initializing /data/ascb/CYT-90_PasolliMousePanoramic_4800.tif: [testng] [2024-06-05 01:26:25,518] [pool-1-thread-3] Initializing /data/damian/33m.tiff: [testng] [2024-06-05 01:26:25,640] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-06-05 01:26:25,663] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-06-05 01:26:26,021] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0213.TIF: [testng] [2024-06-05 01:26:26,066] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-06-05 01:26:26,109] [pool-1-thread-1] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-06-05 01:26:26,609] [pool-1-thread-1] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-06-05 01:26:26,920] [pool-1-thread-3] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-06-05 01:26:26,994] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 9 seconds Finished: SUCCESS