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Started by upstream project "BIOFORMATS-test-repo" build number 83
originally caused by:
 Started by upstream project "Trigger" build number 93
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins8322728984618735293.sh
+ '[' targa = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_12639_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:27:31,166 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:27:31,167 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:27:31,167 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:27:31,168 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:27:31,169 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:27:31,169 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:27:31,169 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:27:31,169 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:27:31,169 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:27:31,170 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:27:31,170 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:27:31,170 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:27:31,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:27:31,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:27:31,350 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:27:31,351 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:27:31,356 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:27:31,356 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:27:31,357 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:27:31,357 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:27:31,357 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:27:31,358 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:27:31,358 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 189 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-05 01:27:31,368] [main] java.version = 17.0.2
   [testng] 01:27:31,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:27:31,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:31,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-05_01-27-31.log]
   [testng] 01:27:31,417 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-06-05 01:27:31,420] [main] testng.directory = /data
   [testng] [2024-06-05 01:27:31,420] [main] testng.configDirectory = /config
   [testng] [2024-06-05 01:27:31,429] [main] testng.multiplier = 1.0
   [testng] [2024-06-05 01:27:31,429] [main] testng.in-memory = false
   [testng] [2024-06-05 01:27:31,430] [main] testng.allow-missing = false
   [testng] [2024-06-05 01:27:31,430] [main] user.language = en
   [testng] [2024-06-05 01:27:31,430] [main] user.country = ${user.country}
   [testng] [2024-06-05 01:27:31,430] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-05 01:27:31,783] [main] ----------------------------------------
   [testng] [2024-06-05 01:27:31,783] [main] Total files: 21
   [testng] [2024-06-05 01:27:31,784] [main] Scan time: 0.353 s (16 ms/file)
   [testng] [2024-06-05 01:27:31,784] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 21 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-05 01:27:32,509] [pool-1-thread-1] Initializing /data/samples/UTC16.TGA: 
   [testng] 01:27:32,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:27:32,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,511 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-05_01-27-32.log]
   [testng] 01:27:32,512 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76548089 - End of configuration.
   [testng] [2024-06-05 01:27:32,529] [pool-1-thread-12] Initializing /data/samples/CTC24.TGA: 
   [testng] 01:27:32,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:27:32,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,530 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-05_01-27-32.log]
   [testng] 01:27:32,530 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e6b1c4 - End of configuration.
   [testng] [2024-06-05 01:27:32,590] [pool-1-thread-11] Initializing /data/samples/UCM8.TGA: 
   [testng] 01:27:32,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:27:32,591 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,592 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-05_01-27-32.log]
   [testng] 01:27:32,592 |-INFO in ch.qos.logback.core.sift.SiftProcessor@584a2980 - End of configuration.
   [testng] [2024-06-05 01:27:32,604] [pool-1-thread-10] Initializing /data/samples/FLAG_B16.TGA: 
   [testng] 01:27:32,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:27:32,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,605 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-05_01-27-32.log]
   [testng] 01:27:32,606 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c5e4fd5 - End of configuration.
   [testng] [2024-06-05 01:27:32,614] [pool-1-thread-9] Initializing /data/samples/XING_T16.TGA: 
   [testng] 01:27:32,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:27:32,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,616 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-05_01-27-32.log]
   [testng] 01:27:32,616 |-INFO in ch.qos.logback.core.sift.SiftProcessor@422dc32f - End of configuration.
   [testng] [2024-06-05 01:27:32,625] [pool-1-thread-8] Initializing /data/samples/UBW8.TGA: 
   [testng] 01:27:32,625 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:27:32,625 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,626 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-05_01-27-32.log]
   [testng] 01:27:32,626 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11dd0b6e - End of configuration.
   [testng] [2024-06-05 01:27:32,635] [pool-1-thread-7] Initializing /data/samples/MARBLES.TGA: 
   [testng] 01:27:32,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:27:32,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,636 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-05_01-27-32.log]
   [testng] 01:27:32,636 |-INFO in ch.qos.logback.core.sift.SiftProcessor@995fef4 - End of configuration.
   [testng] [2024-06-05 01:27:32,653] [pool-1-thread-6] Initializing /data/samples/UTC32.TGA: 
   [testng] 01:27:32,654 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:27:32,654 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,655 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-05_01-27-32.log]
   [testng] 01:27:32,655 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ce37081 - End of configuration.
   [testng] [2024-06-05 01:27:32,664] [pool-1-thread-5] Initializing /data/samples/CCM8.TGA: 
   [testng] 01:27:32,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:27:32,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,665 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-05_01-27-32.log]
   [testng] 01:27:32,665 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16a59c48 - End of configuration.
   [testng] [2024-06-05 01:27:32,673] [pool-1-thread-4] Initializing /data/samples/FLAG_B24.TGA: 
   [testng] 01:27:32,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:27:32,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,674 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-05_01-27-32.log]
   [testng] 01:27:32,675 |-INFO in ch.qos.logback.core.sift.SiftProcessor@132c2ea0 - End of configuration.
   [testng] [2024-06-05 01:27:32,683] [pool-1-thread-3] Initializing /data/samples/XING_B32.TGA: 
   [testng] 01:27:32,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:27:32,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,684 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-05_01-27-32.log]
   [testng] 01:27:32,684 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40398aef - End of configuration.
   [testng] [2024-06-05 01:27:32,694] [pool-1-thread-2] Initializing /data/samples/XING_T24.TGA: 
   [testng] 01:27:32,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:27:32,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:32,695 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-05_01-27-32.log]
   [testng] 01:27:32,696 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4505cc7 - End of configuration.
   [testng] [2024-06-05 01:27:34,208] [pool-1-thread-10] Initializing /data/samples/CBW8.TGA: 
   [testng] [2024-06-05 01:27:34,218] [pool-1-thread-1] Initializing /data/samples/UTC24.TGA: 
   [testng] [2024-06-05 01:27:34,224] [pool-1-thread-11] Initializing /data/samples/CTC16.TGA: 
   [testng] [2024-06-05 01:27:34,231] [pool-1-thread-8] Initializing /data/samples/FLAG_B32.TGA: 
   [testng] [2024-06-05 01:27:34,240] [pool-1-thread-5] Initializing /data/samples/XING_B24.TGA: 
   [testng] [2024-06-05 01:27:34,247] [pool-1-thread-4] Initializing /data/samples/XING_B16.TGA: 
   [testng] [2024-06-05 01:27:34,254] [pool-1-thread-6] Initializing /data/samples/FLAG_T32.TGA: 
   [testng] [2024-06-05 01:27:34,262] [pool-1-thread-12] Initializing /data/samples/FLAG_T16.TGA: 
   [testng] [2024-06-05 01:27:34,271] [pool-1-thread-9] Initializing /data/samples/XING_T32.TGA: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1113, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 8 seconds
Finished: SUCCESS