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Started by upstream project "BIOFORMATS-test-repo" build number 84 originally caused by: Started by upstream project "Trigger" build number 95 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins16692046730914985920.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_12768_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 08:55:40,017 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 08:55:40,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 08:55:40,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 08:55:40,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 08:55:40,019 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 08:55:40,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 08:55:40,020 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 08:55:40,020 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 08:55:40,020 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 08:55:40,021 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 08:55:40,021 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 08:55:40,022 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 08:55:40,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 08:55:40,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 08:55:40,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 08:55:40,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 08:55:40,213 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 08:55:40,213 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 08:55:40,214 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 08:55:40,214 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 08:55:40,214 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 08:55:40,215 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 08:55:40,215 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-06 08:55:40,224] [main] java.version = 21 [testng] 08:55:40,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 08:55:40,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:40,270 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-06_08-55-40.log] [testng] 08:55:40,271 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-06-06 08:55:40,273] [main] testng.directory = /data [testng] [2024-06-06 08:55:40,273] [main] testng.configDirectory = /config [testng] [2024-06-06 08:55:40,283] [main] testng.multiplier = 1.0 [testng] [2024-06-06 08:55:40,283] [main] testng.in-memory = false [testng] [2024-06-06 08:55:40,283] [main] testng.allow-missing = false [testng] [2024-06-06 08:55:40,283] [main] user.language = en [testng] [2024-06-06 08:55:40,283] [main] user.country = ${user.country} [testng] [2024-06-06 08:55:40,283] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-06 08:55:41,185] [main] ---------------------------------------- [testng] [2024-06-06 08:55:41,186] [main] Total files: 103 [testng] [2024-06-06 08:55:41,186] [main] Scan time: 0.901 s (8 ms/file) [testng] [2024-06-06 08:55:41,186] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-06 08:55:49,368] [pool-1-thread-1] Initializing /data/jay/dnasample.tif: [testng] 08:55:49,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 08:55:49,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:49,374 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-06_08-55-49.log] [testng] 08:55:49,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4897d1c3 - End of configuration. [testng] [2024-06-06 08:55:49,463] [pool-1-thread-12] Initializing /data/jay/DMtest2.dm3: [testng] 08:55:49,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 08:55:49,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:49,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-06_08-55-49.log] [testng] 08:55:49,465 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ef0c82a - End of configuration. [testng] [2024-06-06 08:55:49,508] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 08:55:49,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 08:55:49,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:49,509 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-06_08-55-49.log] [testng] 08:55:49,509 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7987611c - End of configuration. [testng] [2024-06-06 08:55:49,524] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] 08:55:49,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 08:55:49,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:49,525 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-06_08-55-49.log] [testng] 08:55:49,525 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d49053b - End of configuration. [testng] [2024-06-06 08:55:49,542] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] 08:55:49,542 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 08:55:49,542 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:49,543 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-06_08-55-49.log] [testng] 08:55:49,543 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51137eac - End of configuration. [testng] [2024-06-06 08:55:49,565] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] 08:55:49,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 08:55:49,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:49,566 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-06_08-55-49.log] [testng] 08:55:49,567 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bbf2160 - End of configuration. [testng] [2024-06-06 08:55:49,672] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] 08:55:49,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 08:55:49,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:49,808 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-06_08-55-49.log] [testng] 08:55:49,809 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79a7048d - End of configuration. [testng] [2024-06-06 08:55:50,110] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] 08:55:50,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 08:55:50,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:50,112 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-06_08-55-50.log] [testng] 08:55:50,113 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e7cab10 - End of configuration. [testng] [2024-06-06 08:55:50,144] [pool-1-thread-5] Initializing /data/qa-7642/8.dm4: [testng] 08:55:50,145 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 08:55:50,145 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:50,146 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-06_08-55-50.log] [testng] 08:55:50,146 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cc1590e - End of configuration. [testng] [2024-06-06 08:55:50,168] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] 08:55:50,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 08:55:50,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:50,171 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-06_08-55-50.log] [testng] 08:55:50,172 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1acb2049 - End of configuration. [testng] [2024-06-06 08:55:50,194] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] 08:55:50,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 08:55:50,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:50,195 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-06_08-55-50.log] [testng] 08:55:50,195 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29f6bc17 - End of configuration. [testng] [2024-06-06 08:55:50,225] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 08:55:50,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 08:55:50,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:50,226 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-06_08-55-50.log] [testng] 08:55:50,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38282c2a - End of configuration. [testng] [2024-06-06 08:55:52,828] [pool-1-thread-2] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-06-06 08:55:52,842] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-06-06 08:55:53,257] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-06-06 08:55:53,314] [pool-1-thread-7] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-06-06 08:55:53,325] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-06-06 08:55:53,607] [pool-1-thread-5] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-06-06 08:55:54,090] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-06-06 08:55:54,623] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-06-06 08:55:54,645] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-06-06 08:55:54,971] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-06-06 08:55:55,016] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-06-06 08:55:55,286] [pool-1-thread-12] Initializing /data/samples/test-tiles.dm3: [testng] [2024-06-06 08:55:55,460] [pool-1-thread-1] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-06-06 08:55:55,557] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-06-06 08:55:55,669] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-06-06 08:55:57,570] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-06-06 08:55:58,396] [pool-1-thread-3] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-06-06 08:55:58,565] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-06-06 08:55:58,868] [pool-1-thread-6] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-06-06 08:55:59,048] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-06-06 08:55:59,298] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-06-06 08:55:59,337] [pool-1-thread-7] Initializing /data/melissa/annotation-test.tif: [testng] [2024-06-06 08:55:59,385] [pool-1-thread-3] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-06-06 08:55:59,862] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-06-06 08:56:00,259] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-06-06 08:56:00,588] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-06-06 08:56:01,236] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-06-06 08:56:02,342] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] [2024-06-06 08:56:02,801] [pool-1-thread-4] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-06-06 08:56:02,971] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-06-06 08:56:03,788] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-06-06 08:56:04,004] [pool-1-thread-4] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-06-06 08:56:04,292] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-06-06 08:56:04,412] [pool-1-thread-10] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-06-06 08:56:04,804] [pool-1-thread-10] Initializing /data/jay/dnasample1.dm3: [testng] [2024-06-06 08:56:05,132] [pool-1-thread-1] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-06-06 08:56:05,558] [pool-1-thread-6] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-06-06 08:56:05,896] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-06-06 08:56:06,816] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-06-06 08:56:09,486] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-06-06 08:56:09,995] [pool-1-thread-1] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-06-06 08:56:11,458] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-06-06 08:56:11,497] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-06-06 08:56:12,950] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-06-06 08:56:12,981] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-06-06 08:56:13,843] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-06-06 08:56:15,082] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-06-06 08:56:16,263] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-06-06 08:56:16,866] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-06-06 08:56:17,174] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-06-06 08:56:18,574] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-06-06 08:56:19,087] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-06-06 08:56:19,448] [pool-1-thread-3] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-06-06 08:56:19,660] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-06-06 08:56:19,884] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-06-06 08:56:19,918] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-06-06 08:56:20,555] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-06-06 08:56:20,968] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-06-06 08:56:21,211] [pool-1-thread-6] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-06-06 08:56:21,397] [pool-1-thread-2] Initializing /data/jay/smallerfile.dm3: [testng] [2024-06-06 08:56:21,715] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-06-06 08:56:21,995] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-06-06 08:56:22,186] [pool-1-thread-11] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-06-06 08:56:22,237] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-06-06 08:56:22,288] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-06-06 08:56:23,686] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-06-06 08:56:23,773] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-06-06 08:56:23,860] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-06-06 08:56:24,006] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-06-06 08:56:24,138] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-06-06 08:56:24,213] [pool-1-thread-2] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-06-06 08:56:24,465] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-06-06 08:56:24,601] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-06-06 08:56:25,806] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-06-06 08:56:26,374] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-06-06 08:56:26,518] [pool-1-thread-12] Initializing /data/ofra/lowloss.dm3: [testng] [2024-06-06 08:56:26,669] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-06-06 08:56:26,775] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-06-06 08:56:27,127] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-06-06 08:56:27,189] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-06-06 08:56:27,210] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-06-06 08:56:27,329] [pool-1-thread-8] Initializing /data/jay/DMtest.dm3: [testng] [2024-06-06 08:56:27,481] [pool-1-thread-12] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-06-06 08:56:27,614] [pool-1-thread-3] Initializing /data/qa-21761/example.dm4: [testng] [2024-06-06 08:56:27,889] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-06-06 08:56:28,209] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 7 seconds Finished: SUCCESS