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Started by upstream project "BIOFORMATS-test-repo" build number 9 originally caused by: Started by upstream project "Trigger" build number 12 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins5097261517686275557.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_1294_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:20:11,129 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:20:11,131 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 00:20:11,131 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:20:11,132 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:20:11,132 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:20:11,132 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:20:11,133 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:20:11,133 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:20:11,133 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:20:11,134 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:20:11,134 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:20:11,134 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:20:11,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:20:11,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:20:11,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:20:11,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:20:11,336 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:20:11,336 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:20:11,336 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:20:11,336 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:20:11,336 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 00:20:11,337 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 00:20:11,337 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 204 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-23 00:20:11,349] [main] java.version = 11.0.16 [testng] 00:20:11,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:20:11,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:11,395 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-23_00-20-11.log] [testng] 00:20:11,396 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-03-23 00:20:11,398] [main] testng.directory = /data [testng] [2024-03-23 00:20:11,399] [main] testng.configDirectory = /config [testng] [2024-03-23 00:20:11,409] [main] testng.multiplier = 1.0 [testng] [2024-03-23 00:20:11,410] [main] testng.in-memory = false [testng] [2024-03-23 00:20:11,410] [main] testng.allow-missing = false [testng] [2024-03-23 00:20:11,410] [main] user.language = en [testng] [2024-03-23 00:20:11,411] [main] user.country = ${user.country} [testng] [2024-03-23 00:20:11,411] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-03-23 00:20:36,096] [main] ---------------------------------------- [testng] [2024-03-23 00:20:36,096] [main] Total files: 4424 [testng] [2024-03-23 00:20:36,096] [main] Scan time: 24.685 s (5 ms/file) [testng] [2024-03-23 00:20:36,096] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-23 00:27:13,211] [pool-1-thread-1] Initializing /data/bene/3d-example-stack.tif: [testng] 00:27:13,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:27:13,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:13,214 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-23_00-27-13.log] [testng] 00:27:13,215 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a5c86e4 - End of configuration. [testng] [2024-03-23 00:27:13,670] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] 00:27:13,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:27:13,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:13,672 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-23_00-27-13.log] [testng] 00:27:13,672 |-INFO in ch.qos.logback.core.sift.SiftProcessor@541e40e7 - End of configuration. [testng] [2024-03-23 00:27:13,984] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] 00:27:13,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:27:13,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:13,985 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-23_00-27-13.log] [testng] 00:27:13,986 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5edf75fa - End of configuration. [testng] [2024-03-23 00:27:14,257] [pool-1-thread-10] Initializing /data/josiah/cell-Z10.C1.tiff: [testng] 00:27:14,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:27:14,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:14,258 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-23_00-27-14.log] [testng] 00:27:14,259 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29925b29 - End of configuration. [testng] [2024-03-23 00:27:14,548] [pool-1-thread-9] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] 00:27:14,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:27:14,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:14,549 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-23_00-27-14.log] [testng] 00:27:14,549 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41a567a6 - End of configuration. [testng] [2024-03-23 00:27:14,844] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] 00:27:14,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:27:14,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:14,845 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-23_00-27-14.log] [testng] 00:27:14,845 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55f442e7 - End of configuration. [testng] [2024-03-23 00:27:15,357] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] 00:27:15,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:27:15,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:15,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-23_00-27-15.log] [testng] 00:27:15,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62c4f235 - End of configuration. [testng] [2024-03-23 00:27:15,945] [pool-1-thread-6] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] 00:27:15,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:27:15,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:15,946 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-23_00-27-15.log] [testng] 00:27:15,947 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fdb19cf - End of configuration. [testng] [2024-03-23 00:27:16,503] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] 00:27:16,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:27:16,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:16,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-23_00-27-16.log] [testng] 00:27:16,505 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e48e01a - End of configuration. [testng] [2024-03-23 00:27:16,885] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 00:27:16,886 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:27:16,886 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:16,886 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-23_00-27-16.log] [testng] 00:27:16,887 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61e66aa3 - End of configuration. [testng] [2024-03-23 00:27:17,380] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] 00:27:17,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:27:17,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:17,381 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-23_00-27-17.log] [testng] 00:27:17,381 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27cdc3bd - End of configuration. [testng] [2024-03-23 00:27:17,668] [pool-1-thread-2] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] 00:27:17,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:27:17,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:27:17,669 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-23_00-27-17.log] [testng] 00:27:17,669 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7544da69 - End of configuration. [testng] [2024-03-23 00:27:24,207] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z025.tif: [testng] [2024-03-23 00:27:24,971] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-03-23 00:27:25,221] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z011.tif: [testng] [2024-03-23 00:27:25,466] [pool-1-thread-4] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] [2024-03-23 00:27:28,338] [pool-1-thread-3] Initializing /data/alexa/test4.tif: [testng] [2024-03-23 00:27:28,667] [pool-1-thread-12] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-03-23 00:27:29,124] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-03-23 00:27:29,595] [pool-1-thread-5] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-03-23 00:27:29,885] [pool-1-thread-10] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-03-23 00:27:30,156] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-03-23 00:27:30,381] [pool-1-thread-8] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-03-23 00:27:32,761] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-03-23 00:27:33,632] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-03-23 00:27:33,871] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-03-23 00:27:34,074] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z054.tif: [testng] [2024-03-23 00:27:34,261] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-03-23 00:27:34,494] [pool-1-thread-7] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-03-23 00:27:34,648] [pool-1-thread-10] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-03-23 00:27:34,947] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-03-23 00:27:35,087] [pool-1-thread-5] Initializing /data/damian/21m.tiff: [testng] [2024-03-23 00:27:36,550] [pool-1-thread-11] Initializing /data/public/condensation/C4.pattern3.tif: [testng] [2024-03-23 00:27:37,282] [pool-1-thread-7] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-03-23 00:27:37,820] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z038.tif: [testng] [2024-03-23 00:27:38,022] [pool-1-thread-10] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-03-23 00:27:38,264] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-03-23 00:27:38,497] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-03-23 00:27:38,677] [pool-1-thread-9] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-03-23 00:27:38,858] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-03-23 00:27:39,294] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z027.tif: [testng] [2024-03-23 00:27:40,467] [pool-1-thread-11] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-03-23 00:27:41,030] [pool-1-thread-7] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-03-23 00:27:41,313] [pool-1-thread-8] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-03-23 00:27:41,611] [pool-1-thread-5] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-03-23 00:27:41,876] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0258.TIF: [testng] [2024-03-23 00:27:42,166] [pool-1-thread-6] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-03-23 00:27:42,397] [pool-1-thread-1] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-03-23 00:27:42,633] [pool-1-thread-12] Initializing /data/josiah/cell-Z4.C1.tiff: 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[pool-1-thread-2] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-03-23 00:31:45,640] [pool-1-thread-5] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [2024-03-23 00:31:45,811] [pool-1-thread-10] Initializing /data/imagesc-82872/SG11410002_253174651388_S001.tif: [testng] [2024-03-23 00:31:46,008] [pool-1-thread-8] Initializing /data/pavel/Dmel/spim.pattern: [testng] [2024-03-23 00:31:50,380] [pool-1-thread-7] Initializing /data/curtis/map/the-quick: [testng] [2024-03-23 00:31:50,543] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-03-23 00:31:50,827] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-03-23 00:31:51,546] [pool-1-thread-3] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] [2024-03-23 00:31:53,681] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z035.tif: [testng] [2024-03-23 00:31:54,327] [pool-1-thread-5] Initializing 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Initializing /data/lzw/test.tif: [testng] [2024-03-23 00:32:00,982] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-03-23 00:32:01,432] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-03-23 00:32:02,205] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-03-23 00:32:02,516] [pool-1-thread-6] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-03-23 00:32:02,794] [pool-1-thread-9] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-03-23 00:32:06,631] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-03-23 00:32:08,278] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-03-23 00:32:08,511] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-03-23 00:32:09,056] [pool-1-thread-5] Initializing 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Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-03-23 00:32:12,865] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-03-23 00:32:12,953] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-03-23 00:32:13,143] [pool-1-thread-11] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-03-23 00:32:13,479] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-03-23 00:32:14,801] [pool-1-thread-3] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-03-23 00:32:15,511] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-03-23 00:32:15,687] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-03-23 00:32:15,825] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-03-23 00:32:15,930] [pool-1-thread-7] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-03-23 00:32:16,069] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z017.tif: [testng] [2024-03-23 00:32:16,197] [pool-1-thread-12] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-03-23 00:32:16,285] [pool-1-thread-4] Initializing /data/misc/ms-paint.png: [testng] [2024-03-23 00:32:17,342] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-03-23 00:32:17,671] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z015.tif: [testng] [2024-03-23 00:32:17,832] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-03-23 00:32:17,921] [pool-1-thread-1] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-03-23 00:32:18,041] [pool-1-thread-7] Initializing /data/damian/18m.tiff: [testng] [2024-03-23 00:32:18,213] [pool-1-thread-2] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-03-23 00:32:18,517] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] [2024-03-23 00:32:20,373] [pool-1-thread-4] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-03-23 00:32:20,866] [pool-1-thread-12] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-03-23 00:32:21,133] [pool-1-thread-6] Initializing /data/big-images/2kx2k.tif: [testng] [2024-03-23 00:32:21,465] [pool-1-thread-5] Initializing /data/jeff/test36b.tif: [testng] [2024-03-23 00:32:21,696] [pool-1-thread-7] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-03-23 00:32:22,003] [pool-1-thread-1] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-03-23 00:32:23,743] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-03-23 00:32:24,069] [pool-1-thread-5] Initializing /data/stephane/P014.tif: [testng] [2024-03-23 00:32:24,427] [pool-1-thread-12] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-03-23 00:32:24,702] [pool-1-thread-1] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-03-23 00:32:24,990] [pool-1-thread-7] Initializing /data/curtis/test1.tiff: [testng] [2024-03-23 00:32:25,329] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-03-23 00:32:26,383] [pool-1-thread-6] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-03-23 00:32:26,832] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z005.tif: [testng] [2024-03-23 00:32:27,150] [pool-1-thread-5] Initializing /data/edward/TestDoc2.tif: [testng] [2024-03-23 00:32:27,489] [pool-1-thread-7] Initializing /data/public/condensation/C4.pattern8.tif: [testng] [2024-03-23 00:32:27,688] [pool-1-thread-3] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-03-23 00:32:27,856] [pool-1-thread-1] Initializing /data/martin/head.tif: [testng] [2024-03-23 00:32:28,053] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-03-23 00:32:28,810] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-03-23 00:32:29,172] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-03-23 00:32:29,383] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-03-23 00:32:29,782] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-03-23 00:32:29,996] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0233.TIF: [testng] [2024-03-23 00:32:30,154] [pool-1-thread-3] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-03-23 00:32:30,903] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-03-23 00:32:31,066] [pool-1-thread-7] Initializing /data/boguslaw/Arabidopsis_large.tif: [testng] [2024-03-23 00:32:31,262] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-03-23 00:32:31,360] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-03-23 00:32:31,426] [pool-1-thread-1] Initializing /data/ascb/FND-26_PaladeGlycogen_4800.tif: [testng] [2024-03-23 00:32:32,256] [pool-1-thread-3] Initializing /data/andrew/wibble-tmp4.tiff: [testng] [2024-03-23 00:32:32,352] [pool-1-thread-12] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-03-23 00:32:32,526] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-03-23 00:32:32,812] [pool-1-thread-4] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-03-23 00:32:32,949] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-03-23 00:32:33,191] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-03-23 00:32:33,628] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-03-23 00:32:34,081] [pool-1-thread-3] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-03-23 00:32:34,250] [pool-1-thread-5] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] [2024-03-23 00:32:34,856] [pool-1-thread-4] Initializing /data/josiah/cell-Z26.C1.tiff: [testng] [2024-03-23 00:32:35,016] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-03-23 00:32:35,180] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-03-23 00:32:35,357] [pool-1-thread-8] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] [2024-03-23 00:32:35,465] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-03-23 00:32:35,568] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-03-23 00:32:36,666] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-03-23 00:32:37,060] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-03-23 00:32:37,172] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-03-23 00:32:37,273] [pool-1-thread-11] Initializing /data/curtis/clown.tif: [testng] [2024-03-23 00:32:37,342] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-03-23 00:32:37,414] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-03-23 00:32:38,698] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-03-23 00:32:38,840] [pool-1-thread-2] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-03-23 00:32:38,969] [pool-1-thread-6] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-03-23 00:32:39,089] [pool-1-thread-11] Initializing /data/john/C100915-MA_AXIS_LEH_IMAGE_KIND_FLAT_ICE_3.tif: [testng] [2024-03-23 00:32:39,209] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] [2024-03-23 00:32:39,305] [pool-1-thread-4] Initializing /data/misc/mri-stack.tif: [testng] [2024-03-23 00:32:39,686] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z042.tif: [testng] [2024-03-23 00:32:39,884] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-03-23 00:32:40,746] [pool-1-thread-12] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] [2024-03-23 00:32:40,893] [pool-1-thread-3] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-03-23 00:32:41,097] [pool-1-thread-7] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-03-23 00:32:41,308] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] [2024-03-23 00:32:41,458] [pool-1-thread-4] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-03-23 00:32:41,546] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-03-23 00:32:41,716] [pool-1-thread-1] Initializing /data/josiah/cell-Z12.C0.tiff: [testng] [2024-03-23 00:32:41,822] [pool-1-thread-9] Initializing /data/curtis/images24.tiff: [testng] [2024-03-23 00:32:41,896] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs000.TIF: [testng] [2024-03-23 00:32:42,053] [pool-1-thread-11] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-03-23 00:32:43,301] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-03-23 00:32:43,581] [pool-1-thread-6] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-03-23 00:32:43,694] [pool-1-thread-1] Initializing /data/jay/Cleared%2fStack.tif: [testng] [2024-03-23 00:32:43,813] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-03-23 00:32:43,924] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-03-23 00:32:44,216] [pool-1-thread-4] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] [2024-03-23 00:32:44,488] [pool-1-thread-2] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-03-23 00:32:44,625] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 12 minutes 51 seconds Finished: SUCCESS