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Started by upstream project "BIOFORMATS-test-repo" build number 85 originally caused by: Started by upstream project "Trigger" build number 96 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins12489291655952785558.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_12940_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:44,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:44,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:44,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:44,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:44,212 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:44,213 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:44,213 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:44,214 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:44,214 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:21:44,215 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:21:44,215 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 476 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-07 01:21:44,230] [main] java.version = 1.8.0_342 [testng] 01:21:44,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:44,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:44,295 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-07_01-21-44.log] [testng] 01:21:44,298 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-06-07 01:21:44,302] [main] testng.directory = /data [testng] [2024-06-07 01:21:44,302] [main] testng.configDirectory = /config [testng] [2024-06-07 01:21:44,322] [main] testng.multiplier = 1.0 [testng] [2024-06-07 01:21:44,323] [main] testng.in-memory = false [testng] [2024-06-07 01:21:44,323] [main] testng.allow-missing = false [testng] [2024-06-07 01:21:44,323] [main] user.language = en [testng] [2024-06-07 01:21:44,323] [main] user.country = ${user.country} [testng] [2024-06-07 01:21:44,323] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-06-07 01:22:05,174] [main] ---------------------------------------- [testng] [2024-06-07 01:22:05,175] [main] Total files: 283 [testng] [2024-06-07 01:22:05,176] [main] Scan time: 20.851 s (73 ms/file) [testng] [2024-06-07 01:22:05,177] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-07 01:31:25,940] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] 01:31:25,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:31:25,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:25,941 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-07_01-31-25.log] [testng] 01:31:25,942 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73d05202 - End of configuration. [testng] [2024-06-07 01:31:26,029] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 01:31:26,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:31:26,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:26,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-07_01-31-26.log] [testng] 01:31:26,031 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5867232b - End of configuration. [testng] [2024-06-07 01:31:26,100] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-1.tif: [testng] 01:31:26,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:31:26,101 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:26,101 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-07_01-31-26.log] [testng] 01:31:26,102 |-INFO in ch.qos.logback.core.sift.SiftProcessor@673ec677 - End of configuration. [testng] [2024-06-07 01:31:26,168] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] 01:31:26,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:31:26,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:26,169 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-07_01-31-26.log] [testng] 01:31:26,169 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19f16f55 - End of configuration. [testng] [2024-06-07 01:31:26,958] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] 01:31:26,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:31:26,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:26,959 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-07_01-31-26.log] [testng] 01:31:26,960 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12a66399 - End of configuration. [testng] [2024-06-07 01:31:27,037] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] 01:31:27,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:31:27,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,038 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-07_01-31-27.log] [testng] 01:31:27,038 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32ad6d0f - End of configuration. [testng] [2024-06-07 01:31:27,108] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] 01:31:27,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:31:27,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,109 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-07_01-31-27.log] [testng] 01:31:27,109 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c1c31d - End of configuration. [testng] [2024-06-07 01:31:27,227] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] 01:31:27,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:31:27,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,228 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-07_01-31-27.log] [testng] 01:31:27,229 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b902039 - End of configuration. [testng] [2024-06-07 01:31:27,346] [pool-1-thread-5] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] 01:31:27,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:31:27,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,348 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-07_01-31-27.log] [testng] 01:31:27,348 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3815e9c4 - End of configuration. [testng] [2024-06-07 01:31:27,742] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] 01:31:27,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:31:27,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-07_01-31-27.log] [testng] 01:31:27,744 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5817f9f9 - End of configuration. [testng] [2024-06-07 01:31:27,859] [pool-1-thread-3] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:31:27,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:31:27,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,860 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-07_01-31-27.log] [testng] 01:31:27,860 |-INFO in ch.qos.logback.core.sift.SiftProcessor@686e9e4 - End of configuration. [testng] [2024-06-07 01:31:27,893] [pool-1-thread-2] Initializing /data/qa-17331/60x zstack RS.oir: [testng] 01:31:27,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:31:27,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,895 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-07_01-31-27.log] [testng] 01:31:27,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@438336ac - End of configuration. [testng] [2024-06-07 01:31:32,425] [pool-1-thread-12] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-06-07 01:31:32,834] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-06-07 01:31:33,201] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-06-07 01:31:33,307] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-06-07 01:31:34,261] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2024-06-07 01:31:34,350] [pool-1-thread-11] Initializing /data/olympus/XYZt.vsi: [testng] [2024-06-07 01:31:34,469] [pool-1-thread-9] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-06-07 01:31:34,783] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-06-07 01:31:34,987] [pool-1-thread-2] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-06-07 01:31:35,190] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-06-07 01:31:36,012] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-06-07 01:31:36,884] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2024-06-07 01:31:41,393] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-06-07 01:31:41,551] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-06-07 01:31:41,608] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-06-07 01:31:41,725] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-06-07 01:31:41,845] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-06-07 01:31:42,808] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-06-07 01:31:43,439] [pool-1-thread-2] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-06-07 01:31:43,646] [pool-1-thread-5] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-06-07 01:31:43,793] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-06-07 01:31:43,874] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-06-07 01:31:44,012] [pool-1-thread-3] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-06-07 01:31:44,081] [pool-1-thread-9] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-06-07 01:31:45,320] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-06-07 01:31:45,438] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-06-07 01:32:14,024] [pool-1-thread-3] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-06-07 01:32:14,108] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-06-07 01:32:15,401] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-06-07 01:32:15,469] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-06-07 01:32:15,729] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-06-07 01:32:16,187] [pool-1-thread-10] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-06-07 01:32:16,778] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-06-07 01:32:17,285] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-06-07 01:32:17,592] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-06-07 01:32:17,702] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2024-06-07 01:32:18,132] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2024-06-07 01:32:18,621] [pool-1-thread-12] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-06-07 01:32:19,491] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-06-07 01:32:19,846] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-06-07 01:32:20,019] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-06-07 01:32:21,376] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-06-07 01:32:22,089] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2024-06-07 01:32:24,520] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-06-07 01:32:25,100] [pool-1-thread-6] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-06-07 01:32:25,365] [pool-1-thread-7] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-06-07 01:32:25,598] [pool-1-thread-4] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-06-07 01:32:25,730] [pool-1-thread-9] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2024-06-07 01:32:25,841] [pool-1-thread-10] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-06-07 01:32:27,040] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-06-07 01:32:27,376] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-06-07 01:32:27,516] [pool-1-thread-4] Initializing /data/qa-17919/f10187.oir: [testng] [2024-06-07 01:32:57,614] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2024-06-07 01:32:57,701] [pool-1-thread-1] Initializing /data/qa-17270/image1.oir: [testng] [2024-06-07 01:32:57,832] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-06-07 01:32:58,089] [pool-1-thread-2] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2024-06-07 01:32:58,150] [pool-1-thread-9] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-06-07 01:32:58,393] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2024-06-07 01:32:58,481] [pool-1-thread-5] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-06-07 01:32:58,999] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-06-07 01:33:00,692] [pool-1-thread-12] 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01:34:19,264] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] [2024-06-07 01:34:20,922] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-06-07 01:34:21,309] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-06-07 01:34:22,079] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-06-07 01:34:22,231] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2024-06-07 01:34:22,439] [pool-1-thread-9] Initializing /data/qa-17917/f10010.oir: [testng] [2024-06-07 01:35:12,825] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-06-07 01:35:12,990] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-06-07 01:35:16,552] [pool-1-thread-8] Initializing 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[2024-06-07 01:35:36,016] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2024-06-07 01:35:37,156] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-06-07 01:35:50,137] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-06-07 01:36:00,191] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-06-07 01:36:04,175] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-06-07 01:36:04,236] [pool-1-thread-2] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-06-07 01:36:05,358] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-06-07 01:36:05,614] [pool-1-thread-2] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-06-07 01:36:07,728] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-06-07 01:36:08,671] [pool-1-thread-1] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-06-07 01:36:09,252] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-06-07 01:36:10,558] [pool-1-thread-5] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-06-07 01:36:19,579] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-06-07 01:36:20,710] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-06-07 01:36:21,175] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-06-07 01:36:21,786] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-06-07 01:36:22,183] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-06-07 01:36:23,014] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-06-07 01:36:23,971] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-06-07 01:36:25,195] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-06-07 01:36:25,252] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-06-07 01:36:26,541] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-06-07 01:36:27,442] [pool-1-thread-2] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-06-07 01:36:27,900] [pool-1-thread-1] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-06-07 01:36:30,833] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-06-07 01:36:31,947] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-06-07 01:36:32,818] [pool-1-thread-12] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-06-07 01:36:33,193] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-06-07 01:36:33,983] [pool-1-thread-12] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-06-07 01:36:38,355] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-06-07 01:36:39,609] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-06-07 01:36:41,585] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-06-07 01:36:41,694] [pool-1-thread-1] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-06-07 01:38:41,714] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-06-07 01:39:10,606] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2024-06-07 01:39:11,186] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-06-07 01:39:12,558] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-06-07 01:39:14,000] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-06-07 01:39:15,098] [pool-1-thread-10] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-06-07 01:39:16,305] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-06-07 01:39:17,036] [pool-1-thread-10] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-06-07 01:39:18,248] [pool-1-thread-10] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-06-07 01:39:28,903] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-06-07 01:39:41,526] [pool-1-thread-3] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-06-07 01:39:42,760] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-06-07 01:39:44,124] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-06-07 01:39:45,442] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-06-07 01:39:46,683] [pool-1-thread-3] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-06-07 01:39:53,269] [pool-1-thread-10] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-06-07 01:39:54,531] [pool-1-thread-10] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-06-07 01:39:55,556] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-06-07 01:39:57,741] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-06-07 01:39:57,994] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2024-06-07 01:39:58,802] [pool-1-thread-3] Initializing /data/qa-16871/Clipboard.tif: [testng] 02:43:38,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:43:38,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:43:38,305 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-07_02-43-38.log] [testng] 02:43:38,305 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76b06e50 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 81 minutes 58 seconds Finished: SUCCESS