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Started by upstream project "BIOFORMATS-test-repo" build number 87 originally caused by: Started by upstream project "Trigger" build number 98 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins2985000066381241043.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_13268_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:38,440 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:38,443 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:21:38,443 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:38,444 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:38,445 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:38,446 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:38,446 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:38,446 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:38,448 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:38,449 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:38,449 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:38,450 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:38,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:38,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:38,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:38,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:38,701 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:38,701 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:38,701 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:38,701 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:38,702 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:21:38,703 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:21:38,703 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 255 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-09 01:21:38,714] [main] java.version = 17.0.2 [testng] 01:21:38,719 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:38,719 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:38,781 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-09_01-21-38.log] [testng] 01:21:38,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-06-09 01:21:38,786] [main] testng.directory = /data [testng] [2024-06-09 01:21:38,786] [main] testng.configDirectory = /config [testng] [2024-06-09 01:21:38,798] [main] testng.multiplier = 1.0 [testng] [2024-06-09 01:21:38,800] [main] testng.in-memory = false [testng] [2024-06-09 01:21:38,800] [main] testng.allow-missing = false [testng] [2024-06-09 01:21:38,800] [main] user.language = en [testng] [2024-06-09 01:21:38,800] [main] user.country = ${user.country} [testng] [2024-06-09 01:21:38,800] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-09 01:21:56,053] [main] ---------------------------------------- [testng] [2024-06-09 01:21:56,054] [main] Total files: 283 [testng] [2024-06-09 01:21:56,054] [main] Scan time: 17.253 s (60 ms/file) [testng] [2024-06-09 01:21:56,054] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-09 01:29:58,627] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:29:58,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:29:58,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:58,629 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-09_01-29-58.log] [testng] 01:29:58,629 |-INFO in ch.qos.logback.core.sift.SiftProcessor@477bfdaf - End of configuration. [testng] [2024-06-09 01:29:58,683] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] 01:29:58,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:29:58,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:58,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-09_01-29-58.log] [testng] 01:29:58,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f65e4f6 - End of configuration. [testng] [2024-06-09 01:29:58,781] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] 01:29:58,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:29:58,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:58,783 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-09_01-29-58.log] [testng] 01:29:58,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60086230 - End of configuration. [testng] [2024-06-09 01:29:58,880] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] 01:29:58,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:29:58,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:58,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-09_01-29-58.log] [testng] 01:29:58,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37af0d6a - End of configuration. [testng] [2024-06-09 01:29:58,981] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] 01:29:58,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:29:58,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:58,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-09_01-29-58.log] [testng] 01:29:58,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@665176a - End of configuration. [testng] [2024-06-09 01:29:59,058] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir: [testng] 01:29:59,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:29:59,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:59,059 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-09_01-29-59.log] [testng] 01:29:59,059 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1344a6a4 - End of configuration. [testng] [2024-06-09 01:29:59,120] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: [testng] 01:29:59,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:29:59,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:59,121 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-09_01-29-59.log] [testng] 01:29:59,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74a2435f - End of configuration. [testng] [2024-06-09 01:30:16,034] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] 01:30:16,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:30:16,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:16,036 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-09_01-30-16.log] [testng] 01:30:16,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@204c8869 - End of configuration. [testng] [2024-06-09 01:30:16,086] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:30:16,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:30:16,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:16,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-09_01-30-16.log] [testng] 01:30:16,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25d7fb3d - End of configuration. [testng] [2024-06-09 01:30:16,111] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] 01:30:16,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:30:16,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:16,112 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-09_01-30-16.log] [testng] 01:30:16,112 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e7ff374 - End of configuration. [testng] [2024-06-09 01:30:16,218] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] 01:30:16,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:30:16,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:16,219 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-09_01-30-16.log] [testng] 01:30:16,220 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c5f3146 - End of configuration. [testng] [2024-06-09 01:30:16,296] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] 01:30:16,297 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:30:16,297 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:16,297 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-09_01-30-16.log] [testng] 01:30:16,298 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68411d1e - End of configuration. [testng] [2024-06-09 01:30:19,995] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-06-09 01:30:20,164] [pool-1-thread-4] Initializing /data/qa-17270/stack1.oir: [testng] [2024-06-09 01:30:21,468] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-06-09 01:30:21,640] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-06-09 01:30:22,052] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-06-09 01:30:22,117] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-06-09 01:30:22,160] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-06-09 01:30:22,192] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-06-09 01:30:22,275] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-06-09 01:30:22,321] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-06-09 01:30:22,914] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: [testng] [2024-06-09 01:30:24,077] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-06-09 01:30:24,247] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-06-09 01:30:24,403] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-06-09 01:30:24,638] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-06-09 01:30:24,732] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-06-09 01:30:25,196] [pool-1-thread-6] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-06-09 01:31:14,945] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-06-09 01:31:15,237] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-06-09 01:31:15,581] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-06-09 01:31:15,948] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-06-09 01:31:16,261] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-06-09 01:31:16,618] [pool-1-thread-3] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-06-09 01:31:16,819] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2024-06-09 01:31:17,008] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2024-06-09 01:31:17,073] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-06-09 01:31:17,149] [pool-1-thread-11] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-06-09 01:31:21,774] [pool-1-thread-2] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-06-09 01:31:22,144] [pool-1-thread-1] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-06-09 01:31:22,807] [pool-1-thread-5] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-06-09 01:31:23,239] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-06-09 01:31:23,671] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-06-09 01:31:23,872] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2024-06-09 01:31:24,967] [pool-1-thread-10] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-06-09 01:31:25,567] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-06-09 01:31:26,002] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-06-09 01:31:26,144] [pool-1-thread-8] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-06-09 01:31:26,369] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-06-09 01:31:26,696] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-06-09 01:31:27,179] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-06-09 01:31:27,571] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-06-09 01:31:28,114] [pool-1-thread-8] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-06-09 01:31:28,592] 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[2024-06-09 01:31:58,838] [pool-1-thread-10] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-06-09 01:31:59,800] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-06-09 01:31:59,875] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2024-06-09 01:32:00,117] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-06-09 01:32:00,823] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-06-09 01:32:01,303] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-06-09 01:32:01,352] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-06-09 01:32:01,560] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2024-06-09 01:32:01,731] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-06-09 01:32:01,824] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2024-06-09 01:32:02,428] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-06-09 01:32:02,668] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-06-09 01:32:02,690] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-06-09 01:32:02,740] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-06-09 01:32:02,802] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-06-09 01:32:03,282] [pool-1-thread-8] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-06-09 01:32:04,331] [pool-1-thread-12] Initializing 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Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-06-09 01:32:32,957] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-06-09 01:32:33,179] [pool-1-thread-3] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-06-09 01:32:33,261] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-06-09 01:32:33,903] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-06-09 01:32:34,161] [pool-1-thread-10] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-06-09 01:32:34,358] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-06-09 01:32:34,730] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-06-09 01:32:35,015] [pool-1-thread-1] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2024-06-09 01:32:35,449] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-06-09 01:32:36,059] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-06-09 01:32:36,438] [pool-1-thread-12] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-06-09 01:32:36,478] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-06-09 01:32:36,764] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2024-06-09 01:32:37,290] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-06-09 01:32:38,083] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-06-09 01:32:38,635] [pool-1-thread-4] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-06-09 01:32:38,686] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-06-09 01:32:39,184] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2024-06-09 01:32:39,626] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-06-09 01:32:40,170] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-06-09 01:32:40,219] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-06-09 01:32:40,641] [pool-1-thread-2] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-06-09 01:32:40,813] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-06-09 01:32:41,464] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-06-09 01:32:41,703] 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01:32:43,648] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-06-09 01:32:43,803] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-06-09 01:32:43,921] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-06-09 01:32:44,103] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-06-09 01:32:44,642] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2024-06-09 01:32:47,748] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2024-06-09 01:32:47,857] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-06-09 01:32:48,117] [pool-1-thread-1] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-06-09 01:32:48,288] [pool-1-thread-10] Initializing 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01:32:56,465] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-06-09 01:32:56,712] [pool-1-thread-1] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-06-09 01:32:57,814] [pool-1-thread-10] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-06-09 01:32:58,137] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-06-09 01:32:58,209] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-06-09 01:32:58,449] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-06-09 01:32:59,513] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-06-09 01:32:59,625] [pool-1-thread-3] Initializing 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Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-06-09 01:33:06,806] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-06-09 01:33:09,710] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-06-09 01:33:12,095] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-06-09 01:33:12,213] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-06-09 01:33:13,103] [pool-1-thread-10] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-06-09 01:33:14,141] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-06-09 01:33:14,445] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2024-06-09 01:33:14,688] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-06-09 01:33:16,217] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-06-09 01:33:16,396] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-06-09 01:33:17,299] [pool-1-thread-1] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-06-09 01:33:17,582] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-06-09 01:33:18,604] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-06-09 01:33:19,160] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 43 minutes 35 seconds Finished: SUCCESS