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Started by upstream project "BIOFORMATS-test-repo" build number 91 originally caused by: Started by upstream project "Trigger" build number 102 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins17543724088309245070.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_13916_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:22:12,016 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:12,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 01:22:12,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:12,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:12,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:12,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:12,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:12,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:12,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:12,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:12,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:12,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:12,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:12,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:12,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:12,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:12,200 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:12,201 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:12,201 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:12,201 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:12,201 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 01:22:12,202 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 01:22:12,202 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 183 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-13 01:22:12,211] [main] java.version = 21 [testng] 01:22:12,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:12,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:12,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-13_01-22-12.log] [testng] 01:22:12,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-06-13 01:22:12,256] [main] testng.directory = /data [testng] [2024-06-13 01:22:12,257] [main] testng.configDirectory = /config [testng] [2024-06-13 01:22:12,265] [main] testng.multiplier = 1.0 [testng] [2024-06-13 01:22:12,266] [main] testng.in-memory = false [testng] [2024-06-13 01:22:12,266] [main] testng.allow-missing = false [testng] [2024-06-13 01:22:12,266] [main] user.language = en [testng] [2024-06-13 01:22:12,266] [main] user.country = ${user.country} [testng] [2024-06-13 01:22:12,266] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-13 01:22:13,163] [main] ---------------------------------------- [testng] [2024-06-13 01:22:13,163] [main] Total files: 103 [testng] [2024-06-13 01:22:13,163] [main] Scan time: 0.897 s (8 ms/file) [testng] [2024-06-13 01:22:13,163] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-13 01:22:20,965] [pool-1-thread-1] Initializing /data/jay/dnasample.tif: [testng] 01:22:20,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:22:20,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:20,968 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-13_01-22-20.log] [testng] 01:22:20,968 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7786af89 - End of configuration. [testng] [2024-06-13 01:22:21,047] [pool-1-thread-12] Initializing /data/jay/DMtest2.dm3: [testng] 01:22:21,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:22:21,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,049 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-13_01-22-21.log] [testng] 01:22:21,049 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8686a2f - End of configuration. [testng] [2024-06-13 01:22:21,104] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 01:22:21,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:22:21,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-13_01-22-21.log] [testng] 01:22:21,106 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e5b4dca - End of configuration. [testng] [2024-06-13 01:22:21,119] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] 01:22:21,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:22:21,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,120 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-13_01-22-21.log] [testng] 01:22:21,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ee5ff5d - End of configuration. [testng] [2024-06-13 01:22:21,136] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] 01:22:21,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:22:21,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,137 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-13_01-22-21.log] [testng] 01:22:21,138 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64482366 - End of configuration. [testng] [2024-06-13 01:22:21,157] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] 01:22:21,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:22:21,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,158 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-13_01-22-21.log] [testng] 01:22:21,158 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c425b87 - End of configuration. [testng] [2024-06-13 01:22:21,404] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] 01:22:21,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:22:21,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,407 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-13_01-22-21.log] [testng] 01:22:21,409 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36adcaa0 - End of configuration. [testng] [2024-06-13 01:22:21,552] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] 01:22:21,553 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:22:21,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-13_01-22-21.log] [testng] 01:22:21,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@656fbb2c - End of configuration. [testng] [2024-06-13 01:22:21,698] [pool-1-thread-5] Initializing /data/qa-7642/8.dm4: [testng] 01:22:21,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:22:21,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,700 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-13_01-22-21.log] [testng] 01:22:21,701 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b06cfca - End of configuration. [testng] [2024-06-13 01:22:21,730] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] 01:22:21,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:22:21,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-13_01-22-21.log] [testng] 01:22:21,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37c5d91d - End of configuration. [testng] [2024-06-13 01:22:21,745] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] 01:22:21,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:22:21,750 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,751 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-13_01-22-21.log] [testng] 01:22:21,752 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ee98be0 - End of configuration. [testng] [2024-06-13 01:22:21,780] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 01:22:21,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:22:21,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:21,782 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-13_01-22-21.log] [testng] 01:22:21,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a9e248e - End of configuration. [testng] [2024-06-13 01:22:24,004] [pool-1-thread-10] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-06-13 01:22:24,019] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-06-13 01:22:24,429] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-06-13 01:22:24,474] [pool-1-thread-4] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-06-13 01:22:24,493] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-06-13 01:22:25,109] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-06-13 01:22:25,188] [pool-1-thread-5] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-06-13 01:22:25,364] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-06-13 01:22:25,450] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-06-13 01:22:25,594] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-06-13 01:22:25,752] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-06-13 01:22:25,854] [pool-1-thread-9] Initializing /data/samples/test-tiles.dm3: [testng] [2024-06-13 01:22:26,052] [pool-1-thread-3] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-06-13 01:22:26,098] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-06-13 01:22:26,173] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-06-13 01:22:27,413] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-06-13 01:22:28,376] [pool-1-thread-9] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-06-13 01:22:28,761] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-06-13 01:22:29,161] [pool-1-thread-9] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-06-13 01:22:29,523] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-06-13 01:22:29,623] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-06-13 01:22:29,809] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif: [testng] [2024-06-13 01:22:30,210] [pool-1-thread-6] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-06-13 01:22:30,222] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-06-13 01:22:30,280] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-06-13 01:22:30,995] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-06-13 01:22:31,291] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-06-13 01:22:31,969] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] [2024-06-13 01:22:33,069] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-06-13 01:22:33,181] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-06-13 01:22:33,285] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-06-13 01:22:33,871] [pool-1-thread-7] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-06-13 01:22:34,002] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-06-13 01:22:35,424] [pool-1-thread-4] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-06-13 01:22:35,502] [pool-1-thread-5] Initializing /data/jay/dnasample1.dm3: [testng] [2024-06-13 01:22:35,771] [pool-1-thread-9] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-06-13 01:22:35,878] [pool-1-thread-4] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-06-13 01:22:35,979] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-06-13 01:22:36,029] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-06-13 01:22:39,262] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-06-13 01:22:39,690] [pool-1-thread-9] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-06-13 01:22:39,855] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-06-13 01:22:40,280] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-06-13 01:22:40,340] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-06-13 01:22:40,990] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-06-13 01:22:42,098] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-06-13 01:22:42,225] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-06-13 01:22:44,281] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-06-13 01:22:45,077] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-06-13 01:22:45,132] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-06-13 01:22:46,593] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-06-13 01:22:47,145] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-06-13 01:22:47,284] [pool-1-thread-4] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-06-13 01:22:47,360] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-06-13 01:22:47,703] [pool-1-thread-2] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-06-13 01:22:47,990] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-06-13 01:22:49,074] [pool-1-thread-8] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-06-13 01:22:49,090] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-06-13 01:22:49,598] [pool-1-thread-6] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-06-13 01:22:49,878] [pool-1-thread-8] Initializing /data/jay/smallerfile.dm3: [testng] [2024-06-13 01:22:50,347] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-06-13 01:22:50,567] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-06-13 01:22:50,625] [pool-1-thread-8] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-06-13 01:22:51,169] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-06-13 01:22:51,491] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-06-13 01:22:52,064] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-06-13 01:22:52,149] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-06-13 01:22:52,253] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-06-13 01:22:52,551] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-06-13 01:22:52,573] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-06-13 01:22:52,665] [pool-1-thread-2] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-06-13 01:22:52,916] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-06-13 01:22:53,020] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-06-13 01:22:53,481] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-06-13 01:22:54,173] [pool-1-thread-6] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-06-13 01:22:54,867] [pool-1-thread-8] Initializing /data/ofra/lowloss.dm3: [testng] [2024-06-13 01:22:55,013] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-06-13 01:22:55,247] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-06-13 01:22:55,298] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-06-13 01:22:55,451] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-06-13 01:22:55,593] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-06-13 01:22:55,711] [pool-1-thread-11] Initializing /data/jay/DMtest.dm3: [testng] [2024-06-13 01:22:56,009] [pool-1-thread-1] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-06-13 01:22:56,119] [pool-1-thread-8] Initializing /data/qa-21761/example.dm4: [testng] [2024-06-13 01:22:56,628] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-06-13 01:22:56,850] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 58 seconds Finished: SUCCESS