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Started by upstream project "BIOFORMATS-test-repo" build number 94
originally caused by:
 Started by upstream project "Trigger" build number 105
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9795043343688639767.sh
+ '[' fluoview = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_14504_merge_ci -v /uod/idr/repos/curated/fluoview:/data -v /uod/idr-scratch/merge-ci/curated/fluoview:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 02:09:00,734 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:09:00,735 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 02:09:00,735 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:09:00,736 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:09:00,736 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:09:00,737 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:09:00,737 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:09:00,737 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:09:00,737 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:09:00,738 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:09:00,738 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:09:00,738 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:09:00,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:09:00,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:09:00,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:09:00,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:09:00,927 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:09:00,927 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:09:00,927 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:09:00,928 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:09:00,928 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 02:09:00,929 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 02:09:00,929 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 192 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-16 02:09:00,938] [main] java.version = 17.0.2
   [testng] 02:09:00,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:09:00,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:00,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-16_02-09-00.log]
   [testng] 02:09:00,983 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-06-16 02:09:00,985] [main] testng.directory = /data
   [testng] [2024-06-16 02:09:00,986] [main] testng.configDirectory = /config
   [testng] [2024-06-16 02:09:00,994] [main] testng.multiplier = 1.0
   [testng] [2024-06-16 02:09:00,995] [main] testng.in-memory = false
   [testng] [2024-06-16 02:09:00,995] [main] testng.allow-missing = false
   [testng] [2024-06-16 02:09:00,995] [main] user.language = en
   [testng] [2024-06-16 02:09:00,995] [main] user.country = ${user.country}
   [testng] [2024-06-16 02:09:00,995] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-16 02:09:01,578] [main] ----------------------------------------
   [testng] [2024-06-16 02:09:01,578] [main] Total files: 14
   [testng] [2024-06-16 02:09:01,578] [main] Scan time: 0.583 s (41 ms/file)
   [testng] [2024-06-16 02:09:01,579] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-16 02:09:06,302] [pool-1-thread-1] Initializing /data/timg/E1-v2(11 som).tif: 
   [testng] 02:09:06,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:09:06,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,304 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-16_02-09-06.log]
   [testng] 02:09:06,304 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5fbd7c0 - End of configuration.
   [testng] [2024-06-16 02:09:06,426] [pool-1-thread-12] Initializing /data/timg/LiveThree-xyzt.tif: 
   [testng] 02:09:06,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:09:06,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,427 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-16_02-09-06.log]
   [testng] 02:09:06,428 |-INFO in ch.qos.logback.core.sift.SiftProcessor@735b60d1 - End of configuration.
   [testng] [2024-06-16 02:09:06,519] [pool-1-thread-11] Initializing /data/timg/LiveOne.tif: 
   [testng] 02:09:06,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:09:06,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,521 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-16_02-09-06.log]
   [testng] 02:09:06,521 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59198ba9 - End of configuration.
   [testng] [2024-06-16 02:09:06,560] [pool-1-thread-10] Initializing /data/timg/eric-three-projection.tif: 
   [testng] 02:09:06,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:09:06,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-16_02-09-06.log]
   [testng] 02:09:06,561 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3965c4cc - End of configuration.
   [testng] [2024-06-16 02:09:06,593] [pool-1-thread-9] Initializing /data/timg/LiveTwo.tif: 
   [testng] 02:09:06,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:09:06,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,594 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-16_02-09-06.log]
   [testng] 02:09:06,594 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e24503f - End of configuration.
   [testng] [2024-06-16 02:09:06,661] [pool-1-thread-8] Initializing /data/brian/DBTRG 2X 1a-1_DSP.TIF: 
   [testng] 02:09:06,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:09:06,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-16_02-09-06.log]
   [testng] 02:09:06,663 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25e0d02c - End of configuration.
   [testng] [2024-06-16 02:09:06,701] [pool-1-thread-7] Initializing /data/brian/DBTRG 2X 1a-1.tif: 
   [testng] 02:09:06,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:09:06,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-16_02-09-06.log]
   [testng] 02:09:06,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a4f9280 - End of configuration.
   [testng] [2024-06-16 02:09:06,817] [pool-1-thread-6] Initializing /data/timg/eric-one-3d.tif: 
   [testng] 02:09:06,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:09:06,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-16_02-09-06.log]
   [testng] 02:09:06,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f2a0562 - End of configuration.
   [testng] [2024-06-16 02:09:06,897] [pool-1-thread-5] Initializing /data/jae/BrdU.1c-1.z.Live1-25-2005_11-58-40_AM.tif: 
   [testng] 02:09:06,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:09:06,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,898 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-16_02-09-06.log]
   [testng] 02:09:06,898 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c8e7878 - End of configuration.
   [testng] [2024-06-16 02:09:06,936] [pool-1-thread-4] Initializing /data/aaron/olympus_fv500.tif: 
   [testng] 02:09:06,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:09:06,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:06,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-16_02-09-06.log]
   [testng] 02:09:06,938 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e805b8e - End of configuration.
   [testng] [2024-06-16 02:09:07,066] [pool-1-thread-3] Initializing /data/timg/eric-one.tif: 
   [testng] 02:09:07,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:09:07,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:07,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-16_02-09-07.log]
   [testng] 02:09:07,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ad50b16 - End of configuration.
   [testng] [2024-06-16 02:09:07,162] [pool-1-thread-2] Initializing /data/shalin/40xNA0.6-512x512.tif: 
   [testng] 02:09:07,163 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:09:07,163 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:09:07,163 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-16_02-09-07.log]
   [testng] 02:09:07,164 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47ae9336 - End of configuration.
   [testng] [2024-06-16 02:09:08,836] [pool-1-thread-11] Initializing /data/timg/eric-three.tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 14 seconds
Finished: SUCCESS