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Started by upstream project "BIOFORMATS-test-repo" build number 95 originally caused by: Started by upstream project "Trigger" build number 106 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins11805063777785707983.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_14581_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:22:41,962 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:41,964 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:22:41,965 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:41,966 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:41,966 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:41,966 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:41,967 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:41,967 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:41,967 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:41,968 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:41,968 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:41,968 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:42,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:42,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:42,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:42,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:42,345 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:42,345 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:42,345 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:42,346 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:42,346 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:22:42,347 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:22:42,348 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 381 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-17 01:22:42,363] [main] java.version = 1.8.0_342 [testng] 01:22:42,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:42,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:42,428 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-17_01-22-42.log] [testng] 01:22:42,431 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-06-17 01:22:42,434] [main] testng.directory = /data [testng] [2024-06-17 01:22:42,434] [main] testng.configDirectory = /config [testng] [2024-06-17 01:22:42,449] [main] testng.multiplier = 1.0 [testng] [2024-06-17 01:22:42,449] [main] testng.in-memory = false [testng] [2024-06-17 01:22:42,449] [main] testng.allow-missing = false [testng] [2024-06-17 01:22:42,449] [main] user.language = fr [testng] [2024-06-17 01:22:42,449] [main] user.country = FR [testng] [2024-06-17 01:22:42,450] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-06-17 01:22:52,836] [main] ---------------------------------------- [testng] [2024-06-17 01:22:52,837] [main] Total files: 4424 [testng] [2024-06-17 01:22:52,838] [main] Scan time: 10.386 s (2 ms/file) [testng] [2024-06-17 01:22:52,838] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-17 01:24:59,972] [pool-1-thread-1] Initializing /data/jae/Second image.tif: [testng] 01:24:59,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:24:59,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:59,974 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-17_01-24-59.log] [testng] 01:24:59,975 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51f25e6 - End of configuration. [testng] [2024-06-17 01:25:00,017] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-1/Leica-1-subifds.tiff: [testng] 01:25:00,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:25:00,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-17_01-25-00.log] [testng] 01:25:00,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7337cabb - End of configuration. [testng] [2024-06-17 01:25:00,084] [pool-1-thread-11] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] 01:25:00,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:25:00,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,086 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-17_01-25-00.log] [testng] 01:25:00,086 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38493910 - End of configuration. [testng] [2024-06-17 01:25:00,120] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] 01:25:00,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:25:00,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,121 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-17_01-25-00.log] [testng] 01:25:00,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a47d1ed - End of configuration. [testng] [2024-06-17 01:25:00,152] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] 01:25:00,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:25:00,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,153 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-17_01-25-00.log] [testng] 01:25:00,153 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9a65a05 - End of configuration. [testng] [2024-06-17 01:25:00,186] [pool-1-thread-8] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] 01:25:00,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:25:00,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,187 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-17_01-25-00.log] [testng] 01:25:00,187 |-INFO in ch.qos.logback.core.sift.SiftProcessor@374d6768 - End of configuration. [testng] [2024-06-17 01:25:00,224] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] 01:25:00,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:25:00,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,226 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-17_01-25-00.log] [testng] 01:25:00,226 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ee7a9e9 - End of configuration. [testng] [2024-06-17 01:25:00,258] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern2.tif: [testng] 01:25:00,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:25:00,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-17_01-25-00.log] [testng] 01:25:00,259 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ce2ae3e - End of configuration. [testng] [2024-06-17 01:25:00,322] [pool-1-thread-5] Initializing /data/kevino/_BF_00005.tif: [testng] 01:25:00,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:25:00,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,323 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-17_01-25-00.log] [testng] 01:25:00,323 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e05c1f8 - End of configuration. [testng] [2024-06-17 01:25:00,395] [pool-1-thread-4] Initializing /data/misc/9 h test.tif: [testng] 01:25:00,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:25:00,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,396 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-17_01-25-00.log] [testng] 01:25:00,396 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39bda712 - End of configuration. [testng] [2024-06-17 01:25:00,428] [pool-1-thread-3] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] 01:25:00,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:25:00,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,429 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-17_01-25-00.log] [testng] 01:25:00,429 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63d25fa5 - End of configuration. [testng] [2024-06-17 01:25:00,523] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern9.tif: [testng] 01:25:00,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:25:00,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:00,524 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-17_01-25-00.log] [testng] 01:25:00,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d5c4ed3 - End of configuration. [testng] [2024-06-17 01:25:03,242] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z014.tif: [testng] [2024-06-17 01:25:03,266] [pool-1-thread-10] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-06-17 01:25:03,290] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-06-17 01:25:03,326] [pool-1-thread-1] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-06-17 01:25:03,349] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-06-17 01:25:03,395] [pool-1-thread-11] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-06-17 01:25:05,419] [pool-1-thread-2] Initializing /data/jay/10-crop-Stack.tif: [testng] [2024-06-17 01:25:05,460] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z052.tif: [testng] [2024-06-17 01:25:05,487] [pool-1-thread-9] Initializing /data/stephane/d01&007.tif: [testng] [2024-06-17 01:25:05,507] [pool-1-thread-7] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-06-17 01:25:05,980] [pool-1-thread-6] Initializing /data/josiah/cell-Z21.C1.tiff: [testng] [2024-06-17 01:25:06,301] [pool-1-thread-9] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-06-17 01:25:06,398] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-06-17 01:25:06,481] [pool-1-thread-10] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-06-17 01:25:06,502] [pool-1-thread-1] Initializing /data/jeff/test36b.tif: [testng] [2024-06-17 01:25:06,631] [pool-1-thread-2] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-06-17 01:25:06,926] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-06-17 01:25:06,956] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z063.tif: [testng] [2024-06-17 01:25:07,792] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0226.TIF: [testng] [2024-06-17 01:25:08,014] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-06-17 01:25:08,224] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-06-17 01:25:08,367] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z024.tif: [testng] [2024-06-17 01:25:08,398] [pool-1-thread-8] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-06-17 01:25:08,452] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-06-17 01:25:08,531] [pool-1-thread-10] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-06-17 01:25:08,587] [pool-1-thread-4] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-06-17 01:25:08,644] [pool-1-thread-9] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-06-17 01:25:09,026] [pool-1-thread-7] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-06-17 01:25:09,143] [pool-1-thread-6] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-06-17 01:25:09,208] [pool-1-thread-5] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-06-17 01:25:09,319] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-06-17 01:25:09,409] [pool-1-thread-8] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-06-17 01:25:09,487] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-06-17 01:25:09,865] [pool-1-thread-12] Initializing /data/public/libtiff/jim___cg.tif: [testng] [2024-06-17 01:25:09,938] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-06-17 01:25:09,988] [pool-1-thread-7] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-06-17 01:25:10,040] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-06-17 01:25:10,164] [pool-1-thread-4] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-06-17 01:25:10,192] [pool-1-thread-8] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-06-17 01:25:10,362] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-06-17 01:25:10,466] [pool-1-thread-6] Initializing /data/qa-5004/ID4118_21_uncuff_10x_HE.tif: [testng] [2024-06-17 01:25:11,045] [pool-1-thread-8] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-06-17 01:25:11,138] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0209.TIF: [testng] [2024-06-17 01:25:11,451] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-06-17 01:25:11,695] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] [2024-06-17 01:25:11,736] [pool-1-thread-4] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-06-17 01:25:11,779] [pool-1-thread-12] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-06-17 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/data/kelsey/Live-Dead Assay 4000 nm pitch PU.TIF: [testng] [2024-06-17 01:27:29,905] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z035.tif: [testng] [2024-06-17 01:27:29,958] [pool-1-thread-4] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-06-17 01:27:30,017] [pool-1-thread-10] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-06-17 01:27:30,136] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-06-17 01:27:30,267] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-06-17 01:27:30,380] [pool-1-thread-6] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-06-17 01:27:30,486] [pool-1-thread-12] Initializing /data/public/condensation/C4.pattern2.tif: [testng] [2024-06-17 01:27:30,935] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-06-17 01:27:31,022] [pool-1-thread-8] Initializing 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/data/brian/retina/retina_C0_Z035.tif: [testng] [2024-06-17 01:27:33,313] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] [2024-06-17 01:27:33,428] [pool-1-thread-12] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-06-17 01:27:33,780] [pool-1-thread-6] Initializing /data/misc/mri-stack.tif: [testng] [2024-06-17 01:27:33,913] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-06-17 01:27:34,011] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-06-17 01:27:34,066] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-06-17 01:27:34,973] [pool-1-thread-2] Initializing /data/stephane/d02&007.tif: [testng] [2024-06-17 01:27:35,084] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0222.TIF: [testng] [2024-06-17 01:27:35,156] [pool-1-thread-6] Initializing /data/josh/NESb_C2_TP9.tiff: [testng] [2024-06-17 01:27:35,318] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x64.tiff: [testng] [2024-06-17 01:27:35,406] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z000.tif: [testng] [2024-06-17 01:27:35,484] [pool-1-thread-2] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-06-17 01:27:35,649] [pool-1-thread-12] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-06-17 01:27:35,705] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z025.tif: [testng] [2024-06-17 01:27:35,729] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-06-17 01:27:35,962] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-06-17 01:27:36,236] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-06-17 01:27:36,279] [pool-1-thread-8] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-06-17 01:27:36,360] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0217.TIF: [testng] [2024-06-17 01:27:36,538] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-06-17 01:27:36,647] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-06-17 01:27:37,041] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-06-17 01:27:37,095] [pool-1-thread-2] Initializing /data/josiah/cell-Z14.C1.tiff: [testng] [2024-06-17 01:27:37,129] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-06-17 01:27:37,306] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-06-17 01:27:37,422] [pool-1-thread-1] Initializing /data/curtis/imagesEight.tiff: [testng] [2024-06-17 01:27:37,548] [pool-1-thread-9] Initializing /data/stephane/001_z01.tif: [testng] [2024-06-17 01:27:37,591] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-06-17 01:27:37,613] [pool-1-thread-2] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-06-17 01:27:38,404] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x16.tiff: [testng] [2024-06-17 01:27:38,557] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-06-17 01:27:38,651] [pool-1-thread-12] Initializing /data/qa-4833/cjw_tiffs/23273992_Figure 6_NA_NA_22159.TIF: [testng] [2024-06-17 01:27:38,787] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-06-17 01:27:38,835] [pool-1-thread-6] Initializing /data/tom-kazimiers/crop_two_chan.tiff: [testng] [2024-06-17 01:27:38,886] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-06-17 01:27:38,928] [pool-1-thread-3] Initializing /data/curtis/test1.tiff: [testng] [2024-06-17 01:27:39,055] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] [2024-06-17 01:27:39,134] [pool-1-thread-6] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina.tif: [testng] [2024-06-17 01:27:39,208] [pool-1-thread-3] Initializing /data/alexa/test4.tif: [testng] [2024-06-17 01:27:39,280] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z014.tif: [testng] [2024-06-17 01:27:39,627] [pool-1-thread-9] Initializing /data/ascb/bad/CYT-76_PasolliMouse1_4800.tif: [testng] [2024-06-17 01:27:39,740] [pool-1-thread-3] Initializing /data/julien/baldinsug1LMP2col.TIF: [testng] [2024-06-17 01:27:39,788] [pool-1-thread-7] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-06-17 01:27:40,113] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0231.TIF: [testng] [2024-06-17 01:27:40,390] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-06-17 01:27:40,561] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-06-17 01:27:40,792] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z004.tif: [testng] [2024-06-17 01:27:40,838] [pool-1-thread-3] Initializing /data/misc/mri.avi: [testng] [2024-06-17 01:27:40,916] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-06-17 01:27:40,961] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z043.tif: [testng] [2024-06-17 01:27:41,049] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-06-17 01:27:41,205] [pool-1-thread-3] Initializing /data/josiah/cell-Z1.C1.tiff: [testng] [2024-06-17 01:27:41,241] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-06-17 01:27:41,268] [pool-1-thread-5] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-06-17 01:27:41,337] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-06-17 01:27:41,378] [pool-1-thread-8] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-06-17 01:27:41,575] [pool-1-thread-4] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-06-17 01:27:41,627] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-06-17 01:27:41,746] [pool-1-thread-3] Initializing /data/public/libtiff/jim___dg.tif: [testng] [2024-06-17 01:27:41,780] [pool-1-thread-12] Initializing /data/josiah/cell-Z23.C0.tiff: [testng] [2024-06-17 01:27:41,923] [pool-1-thread-8] Initializing /data/johan/Test1_12.tif: [testng] [2024-06-17 01:27:42,086] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-06-17 01:27:42,227] [pool-1-thread-7] Initializing /data/tamjid/10_para-stage 1.tiff: [testng] [2024-06-17 01:27:42,278] [pool-1-thread-1] Initializing /data/paulh/quickpollen4_w1_t1.tif: [testng] [2024-06-17 01:27:42,344] [pool-1-thread-4] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-06-17 01:27:42,372] [pool-1-thread-5] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-06-17 01:27:42,420] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-06-17 01:27:42,580] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-06-17 01:27:42,863] [pool-1-thread-12] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-06-17 01:27:42,899] [pool-1-thread-3] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] [2024-06-17 01:27:42,961] [pool-1-thread-1] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-06-17 01:27:43,004] [pool-1-thread-7] Initializing /data/curtis/test2.tiff: [testng] [2024-06-17 01:27:43,037] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-06-17 01:27:43,184] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-06-17 01:27:43,306] [pool-1-thread-7] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-06-17 01:27:43,493] [pool-1-thread-4] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-06-17 01:27:45,634] [pool-1-thread-1] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-06-17 01:27:45,783] [pool-1-thread-3] Initializing /data/ascb/FND-27_PaladeGolgi_4800.tif: [testng] [2024-06-17 01:27:45,965] [pool-1-thread-12] Initializing /data/ascb/FND-26a_PaladeGlycogenLabeled_4800.tif: [testng] [2024-06-17 01:27:48,640] [pool-1-thread-11] Initializing /data/boguslaw/Rab582 3d det gfapBrdUmib1z24Live9-14-2007_11-55-58_AM copy.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 40 seconds Finished: SUCCESS