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Started by upstream project "BIOFORMATS-test-repo" build number 2 originally caused by: Started by upstream project "Trigger" build number 3 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins6633662583129769839.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_146_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:19:42,400 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:19:42,402 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 00:19:42,402 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:19:42,404 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:19:42,404 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:19:42,404 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:19:42,405 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:19:42,405 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:19:42,405 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:19:42,406 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:19:42,406 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:19:42,406 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:19:42,659 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:19:42,659 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:19:42,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:19:42,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:19:42,707 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:19:42,707 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:19:42,707 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:19:42,708 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:19:42,708 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 00:19:42,710 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 00:19:42,710 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 305 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-15 00:19:42,721] [main] java.version = 1.8.0_342 [testng] 00:19:42,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:19:42,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:19:42,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-15_00-19-42.log] [testng] 00:19:42,776 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-03-15 00:19:42,779] [main] testng.directory = /data [testng] [2024-03-15 00:19:42,779] [main] testng.configDirectory = /config [testng] [2024-03-15 00:19:42,792] [main] testng.multiplier = 1.0 [testng] [2024-03-15 00:19:42,792] [main] testng.in-memory = false [testng] [2024-03-15 00:19:42,792] [main] testng.allow-missing = false [testng] [2024-03-15 00:19:42,792] [main] user.language = en [testng] [2024-03-15 00:19:42,792] [main] user.country = ${user.country} [testng] [2024-03-15 00:19:42,792] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-03-15 00:20:03,347] [main] ---------------------------------------- [testng] [2024-03-15 00:20:03,348] [main] Total files: 4424 [testng] [2024-03-15 00:20:03,348] [main] Scan time: 20.554 s (4 ms/file) [testng] [2024-03-15 00:20:03,348] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-15 00:25:00,521] [pool-1-thread-1] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] 00:25:00,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:25:00,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:00,525 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-15_00-25-00.log] [testng] 00:25:00,525 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71e42f72 - End of configuration. [testng] [2024-03-15 00:25:00,774] [pool-1-thread-12] Initializing /data/wayne/apple.tif: [testng] 00:25:00,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:25:00,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:00,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-15_00-25-00.log] [testng] 00:25:00,775 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cb6235c - End of configuration. [testng] [2024-03-15 00:25:01,037] [pool-1-thread-11] Initializing /data/josiah/cell-Z31.C0.tiff: [testng] 00:25:01,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:25:01,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:01,038 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-15_00-25-01.log] [testng] 00:25:01,039 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b805b4b - End of configuration. [testng] [2024-03-15 00:25:01,242] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z010.tif: [testng] 00:25:01,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:25:01,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:01,243 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-15_00-25-01.log] [testng] 00:25:01,244 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fea0df9 - End of configuration. [testng] [2024-03-15 00:25:01,501] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z000.tif: [testng] 00:25:01,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:25:01,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:01,502 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-15_00-25-01.log] [testng] 00:25:01,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@604d05e5 - End of configuration. [testng] [2024-03-15 00:25:01,749] [pool-1-thread-8] Initializing /data/josiah/cell-Z32.C0.tiff: [testng] 00:25:01,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:25:01,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:01,750 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-15_00-25-01.log] [testng] 00:25:01,750 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d06f3b2 - End of configuration. [testng] [2024-03-15 00:25:02,032] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] 00:25:02,033 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:25:02,033 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:02,033 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-15_00-25-02.log] [testng] 00:25:02,034 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5decf517 - End of configuration. [testng] [2024-03-15 00:25:02,198] [pool-1-thread-6] Initializing /data/public/libtiff/caspian.tif: [testng] 00:25:02,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:25:02,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:02,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-15_00-25-02.log] [testng] 00:25:02,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@574a24 - End of configuration. [testng] [2024-03-15 00:25:02,379] [pool-1-thread-5] Initializing /data/misc/9 h test.tif: [testng] 00:25:02,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:25:02,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:02,381 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-15_00-25-02.log] [testng] 00:25:02,381 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33c9fe3b - End of configuration. [testng] [2024-03-15 00:25:02,484] [pool-1-thread-4] Initializing /data/public/condensation/A1.pattern1.tif: [testng] 00:25:02,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:25:02,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:02,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-15_00-25-02.log] [testng] 00:25:02,486 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52dccea1 - End of configuration. [testng] [2024-03-15 00:25:02,711] [pool-1-thread-3] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] 00:25:02,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:25:02,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:02,712 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-15_00-25-02.log] [testng] 00:25:02,713 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62f23010 - End of configuration. [testng] [2024-03-15 00:25:02,988] [pool-1-thread-2] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] 00:25:02,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:25:02,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:02,990 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-15_00-25-02.log] [testng] 00:25:02,990 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78d15687 - End of configuration. [testng] [2024-03-15 00:25:05,993] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z033.tif: [testng] [2024-03-15 00:25:07,364] [pool-1-thread-11] Initializing /data/paul-van-schayck/myfile.tif: [testng] [2024-03-15 00:25:07,605] [pool-1-thread-9] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-03-15 00:25:08,037] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x32.tiff: [testng] [2024-03-15 00:25:08,377] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0222.TIF: [testng] [2024-03-15 00:25:08,743] [pool-1-thread-8] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-03-15 00:25:09,222] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] [2024-03-15 00:25:09,533] [pool-1-thread-4] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-03-15 00:25:10,138] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-03-15 00:25:10,426] [pool-1-thread-2] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-03-15 00:25:10,811] [pool-1-thread-1] Initializing /data/josiah/cell-Z28.C0.tiff: [testng] [2024-03-15 00:25:14,042] [pool-1-thread-5] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-03-15 00:25:15,038] [pool-1-thread-12] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-03-15 00:25:15,613] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0243.TIF: [testng] [2024-03-15 00:25:16,665] [pool-1-thread-11] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-03-15 00:25:17,076] [pool-1-thread-1] Initializing /data/qa-7589/CalGrid.tif: [testng] [2024-03-15 00:25:17,433] [pool-1-thread-6] Initializing /data/damian/06m.tiff: [testng] [2024-03-15 00:25:17,752] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0245.TIF: [testng] [2024-03-15 00:25:18,039] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-03-15 00:25:18,298] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-03-15 00:25:18,568] [pool-1-thread-3] Initializing /data/andrew/wibble-tmp4.tiff: [testng] [2024-03-15 00:25:20,415] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z030.tif: [testng] [2024-03-15 00:25:21,409] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-03-15 00:25:21,751] [pool-1-thread-6] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-03-15 00:25:22,146] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-03-15 00:25:22,436] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-03-15 00:25:22,730] [pool-1-thread-3] Initializing /data/misc/mri-stack.tif: [testng] [2024-03-15 00:25:23,108] [pool-1-thread-11] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-03-15 00:25:23,385] [pool-1-thread-4] Initializing /data/josiah/cell-Z37.C1.tiff: [testng] [2024-03-15 00:25:23,668] [pool-1-thread-10] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-03-15 00:25:24,010] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-03-15 00:25:25,612] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-03-15 00:25:26,663] [pool-1-thread-7] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-03-15 00:25:27,257] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-03-15 00:25:27,498] [pool-1-thread-2] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-03-15 00:25:27,739] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] [2024-03-15 00:25:27,965] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0238.TIF: [testng] [2024-03-15 00:25:28,165] [pool-1-thread-1] Initializing /data/samples/melissa/strike-uncompressed.tiff: [testng] [2024-03-15 00:25:28,325] [pool-1-thread-8] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-03-15 00:25:28,483] [pool-1-thread-11] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-03-15 00:25:28,630] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-03-15 00:25:30,069] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-32.tiff: [testng] [2024-03-15 00:25:30,909] [pool-1-thread-4] Initializing /data/curtis/tubhiswt-5D.tif: [testng] [2024-03-15 00:25:31,259] [pool-1-thread-1] Initializing /data/curtis/imagesEight.tiff: [testng] [2024-03-15 00:25:31,436] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-03-15 00:25:31,635] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-03-15 00:25:31,858] [pool-1-thread-11] Initializing 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[2024-03-15 00:29:39,811] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-03-15 00:29:39,932] [pool-1-thread-5] Initializing /data/ascb/CYT-43_HowellAcinarUnlabeled_4800.tif: [testng] [2024-03-15 00:29:40,094] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-03-15 00:29:40,196] [pool-1-thread-7] Initializing /data/josiah/cell-Z10.C1.tiff: [testng] [2024-03-15 00:29:40,312] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z036.tif: [testng] [2024-03-15 00:29:40,495] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x32.tiff: [testng] [2024-03-15 00:29:41,194] [pool-1-thread-8] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-03-15 00:29:41,349] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z035.tif: [testng] [2024-03-15 00:29:41,621] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-03-15 00:29:41,736] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z030.tif: [testng] [2024-03-15 00:29:41,835] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-03-15 00:29:41,903] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-03-15 00:29:41,946] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0213.TIF: [testng] [2024-03-15 00:29:42,863] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-03-15 00:29:42,964] [pool-1-thread-10] Initializing /data/josiah/cell-Z4.C0.tiff: [testng] [2024-03-15 00:29:43,037] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-03-15 00:29:43,086] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x48.tiff: [testng] [2024-03-15 00:29:43,122] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z022.tif: [testng] [2024-03-15 00:29:43,550] [pool-1-thread-4] Initializing /data/public/condensation/A10.pattern5.tif: [testng] [2024-03-15 00:29:44,705] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x48.tiff: [testng] [2024-03-15 00:29:44,798] [pool-1-thread-7] Initializing /data/josiah/cell-Z12.C1.tiff: [testng] [2024-03-15 00:29:44,926] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-03-15 00:29:45,006] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0241.TIF: [testng] [2024-03-15 00:29:45,118] [pool-1-thread-6] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-03-15 00:29:45,327] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs000.TIF: [testng] [2024-03-15 00:29:45,711] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-03-15 00:29:45,893] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-03-15 00:29:45,991] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z019.tif: [testng] [2024-03-15 00:29:46,105] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0217.TIF: [testng] [2024-03-15 00:29:46,433] [pool-1-thread-6] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-03-15 00:29:46,577] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z004.tif: [testng] [2024-03-15 00:29:46,778] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z050.tif: [testng] [2024-03-15 00:29:46,986] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-03-15 00:29:47,137] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-03-15 00:29:47,263] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-03-15 00:29:47,378] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-03-15 00:29:47,898] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0223.TIF: [testng] [2024-03-15 00:29:48,049] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z009.tif: [testng] [2024-03-15 00:29:48,168] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0231.TIF: [testng] [2024-03-15 00:29:48,360] [pool-1-thread-10] Initializing /data/josiah/cell-Z23.C0.tiff: [testng] [2024-03-15 00:29:48,464] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x32.tiff: [testng] [2024-03-15 00:29:48,513] [pool-1-thread-7] Initializing /data/sub-resolution/Leica-2/Leica-2-subifds.tiff: [testng] [2024-03-15 00:29:48,731] [pool-1-thread-11] Initializing /data/damian/24m.tiff: [testng] [2024-03-15 00:29:48,871] [pool-1-thread-5] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-03-15 00:29:49,168] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-03-15 00:29:49,513] [pool-1-thread-4] Initializing /data/public/condensation/B12.pattern3.tif: [testng] [2024-03-15 00:29:49,643] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x16.tiff: [testng] [2024-03-15 00:29:49,785] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-03-15 00:29:50,015] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] [2024-03-15 00:29:50,175] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-03-15 00:29:50,469] [pool-1-thread-5] Initializing /data/ascb/CYT-55_HowellGolgiRibbonOutlined_4800.tif: [testng] [2024-03-15 00:29:50,621] [pool-1-thread-6] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-03-15 00:29:50,844] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-03-15 00:29:51,032] [pool-1-thread-12] Initializing /data/darwinjob/SESSION4_Image2.tif: [testng] [2024-03-15 00:29:51,244] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0240.TIF: [testng] [2024-03-15 00:29:51,422] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-03-15 00:29:51,873] [pool-1-thread-10] Initializing /data/jeff/test36b.tif: [testng] [2024-03-15 00:29:51,945] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-03-15 00:29:52,225] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z033.tif: [testng] [2024-03-15 00:29:52,773] [pool-1-thread-6] Initializing /data/brian/CurrentSystems.tiff: [testng] [2024-03-15 00:29:52,847] [pool-1-thread-3] Initializing /data/martin/head.tif: [testng] [2024-03-15 00:29:52,958] [pool-1-thread-10] Initializing /data/jayne/Zst_42/WTZER_Series42_z000_ch00.tif: [testng] [2024-03-15 00:29:53,297] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-03-15 00:29:53,460] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z013.tif: [testng] [2024-03-15 00:29:53,578] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z010.tif: [testng] [2024-03-15 00:29:53,718] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-03-15 00:29:54,395] [pool-1-thread-3] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-03-15 00:29:54,597] [pool-1-thread-1] Initializing /data/tobias/test002_1.tif: [testng] [2024-03-15 00:29:55,143] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0247.TIF: [testng] [2024-03-15 00:29:55,442] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z062.tif: [testng] [2024-03-15 00:29:55,496] [pool-1-thread-4] Initializing /data/josiah/cell-Z19.C0.tiff: [testng] [2024-03-15 00:29:55,591] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z011.tif: [testng] [2024-03-15 00:29:55,640] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-03-15 00:29:55,772] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-64.tiff: [testng] [2024-03-15 00:29:55,895] [pool-1-thread-12] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-03-15 00:29:57,642] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z020.tif: [testng] [2024-03-15 00:29:57,900] [pool-1-thread-6] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-03-15 00:29:58,304] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-03-15 00:29:58,524] [pool-1-thread-2] Initializing /data/josiah/cell-Z31.C1.tiff: [testng] [2024-03-15 00:29:58,583] [pool-1-thread-3] Initializing /data/public/condensation/A6.pattern2.tif: [testng] [2024-03-15 00:29:58,674] [pool-1-thread-4] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-03-15 00:29:58,719] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-03-15 00:29:58,845] [pool-1-thread-7] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-03-15 00:29:59,031] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z037.tif: [testng] [2024-03-15 00:30:00,369] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-03-15 00:30:01,722] [pool-1-thread-3] Initializing /data/curtis/map/the-quick: [testng] [2024-03-15 00:30:01,957] [pool-1-thread-2] Initializing /data/damian/09m.tiff: [testng] [2024-03-15 00:30:02,235] [pool-1-thread-4] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-03-15 00:30:02,365] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs001.TIF: [testng] [2024-03-15 00:30:02,639] [pool-1-thread-12] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-03-15 00:30:02,912] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z024.tif: [testng] [2024-03-15 00:30:03,267] [pool-1-thread-8] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-03-15 00:30:03,666] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0209.TIF: [testng] [2024-03-15 00:30:04,159] [pool-1-thread-3] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-03-15 00:30:05,135] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-03-15 00:30:05,291] [pool-1-thread-2] Initializing /data/brian/061124MitogreenDIV3Cell2-1 copy.tif: [testng] [2024-03-15 00:30:05,417] [pool-1-thread-4] Initializing /data/boguslaw/ret_crop_64x64x64.tif: [testng] [2024-03-15 00:30:05,505] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z011.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 11 minutes 5 seconds Finished: SUCCESS