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Started by upstream project "BIOFORMATS-test-repo" build number 96 originally caused by: Started by upstream project "Trigger" build number 107 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins17405288626292939225.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_14745_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:21:27,436 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:27,439 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:21:27,439 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:27,441 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:27,443 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:27,443 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:27,444 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 4 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:27,444 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:27,444 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:27,445 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:27,445 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:27,446 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:27,657 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:27,657 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:27,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:27,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:27,692 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:27,692 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:27,692 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:27,693 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:27,693 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:21:27,694 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:21:27,695 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 250 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-18 01:21:27,707] [main] java.version = 11.0.16 [testng] 01:21:27,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:27,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:27,766 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-18_01-21-27.log] [testng] 01:21:27,769 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-06-18 01:21:27,774] [main] testng.directory = /data [testng] [2024-06-18 01:21:27,775] [main] testng.configDirectory = /config [testng] [2024-06-18 01:21:27,793] [main] testng.multiplier = 1.0 [testng] [2024-06-18 01:21:27,796] [main] testng.in-memory = false [testng] [2024-06-18 01:21:27,796] [main] testng.allow-missing = false [testng] [2024-06-18 01:21:27,796] [main] user.language = en [testng] [2024-06-18 01:21:27,796] [main] user.country = ${user.country} [testng] [2024-06-18 01:21:27,796] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-18 01:21:35,214] [main] ---------------------------------------- [testng] [2024-06-18 01:21:35,215] [main] Total files: 4424 [testng] [2024-06-18 01:21:35,215] [main] Scan time: 7.418 s (1 ms/file) [testng] [2024-06-18 01:21:35,216] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-18 01:23:39,487] [pool-1-thread-1] Initializing /data/bene/3d-example-stack.tif: [testng] 01:23:39,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:39,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-18_01-23-39.log] [testng] 01:23:39,491 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70439151 - End of configuration. [testng] [2024-06-18 01:23:39,557] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] 01:23:39,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:39,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,558 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-18_01-23-39.log] [testng] 01:23:39,558 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f87b3dc - End of configuration. [testng] [2024-06-18 01:23:39,584] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] 01:23:39,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:39,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,585 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-18_01-23-39.log] [testng] 01:23:39,585 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35fb59f2 - End of configuration. [testng] [2024-06-18 01:23:39,608] [pool-1-thread-10] Initializing /data/josiah/cell-Z10.C1.tiff: [testng] 01:23:39,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:39,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,609 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-18_01-23-39.log] [testng] 01:23:39,610 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2caa05b9 - End of configuration. [testng] [2024-06-18 01:23:39,641] [pool-1-thread-9] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] 01:23:39,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:39,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,642 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-18_01-23-39.log] [testng] 01:23:39,642 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26f03d32 - End of configuration. [testng] [2024-06-18 01:23:39,679] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] 01:23:39,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:39,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,680 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-18_01-23-39.log] [testng] 01:23:39,680 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70f2d7b3 - End of configuration. [testng] [2024-06-18 01:23:39,746] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] 01:23:39,747 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:39,747 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,748 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-18_01-23-39.log] [testng] 01:23:39,748 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66640e31 - End of configuration. [testng] [2024-06-18 01:23:39,781] [pool-1-thread-6] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] 01:23:39,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:39,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,782 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-18_01-23-39.log] [testng] 01:23:39,782 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ac48033 - End of configuration. [testng] [2024-06-18 01:23:39,849] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] 01:23:39,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:39,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,850 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-18_01-23-39.log] [testng] 01:23:39,850 |-INFO in ch.qos.logback.core.sift.SiftProcessor@118d58b2 - End of configuration. [testng] [2024-06-18 01:23:39,908] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 01:23:39,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:39,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,909 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-18_01-23-39.log] [testng] 01:23:39,910 |-INFO in ch.qos.logback.core.sift.SiftProcessor@174e9db7 - End of configuration. [testng] [2024-06-18 01:23:39,948] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] 01:23:39,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:39,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,949 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-18_01-23-39.log] [testng] 01:23:39,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63874c48 - End of configuration. [testng] [2024-06-18 01:23:39,984] [pool-1-thread-2] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] 01:23:39,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:39,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:39,985 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-18_01-23-39.log] [testng] 01:23:39,986 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17cbe5a2 - End of configuration. [testng] [2024-06-18 01:23:43,665] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z025.tif: [testng] [2024-06-18 01:23:43,938] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-06-18 01:23:43,957] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-06-18 01:23:44,166] [pool-1-thread-10] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-06-18 01:23:44,214] [pool-1-thread-1] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-06-18 01:23:44,251] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-06-18 01:23:44,274] [pool-1-thread-4] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-06-18 01:23:44,338] [pool-1-thread-9] Initializing /data/alexa/test4.tif: [testng] [2024-06-18 01:23:44,390] [pool-1-thread-6] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] [2024-06-18 01:23:46,572] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z011.tif: [testng] [2024-06-18 01:23:46,601] [pool-1-thread-5] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-06-18 01:23:46,809] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-06-18 01:23:46,914] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-06-18 01:23:46,977] [pool-1-thread-12] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-06-18 01:23:47,185] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-06-18 01:23:47,214] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z054.tif: [testng] [2024-06-18 01:23:47,348] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-06-18 01:23:47,442] [pool-1-thread-8] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-06-18 01:23:47,690] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-06-18 01:23:47,764] [pool-1-thread-11] Initializing /data/damian/21m.tiff: [testng] [2024-06-18 01:23:47,830] [pool-1-thread-12] Initializing /data/public/condensation/C4.pattern3.tif: [testng] [2024-06-18 01:23:48,008] [pool-1-thread-9] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-06-18 01:23:48,045] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-06-18 01:23:48,070] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z038.tif: [testng] [2024-06-18 01:23:48,220] [pool-1-thread-10] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-06-18 01:23:48,568] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-06-18 01:23:48,604] [pool-1-thread-8] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-06-18 01:23:48,703] [pool-1-thread-11] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-06-18 01:23:48,753] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z027.tif: [testng] [2024-06-18 01:23:48,799] [pool-1-thread-12] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-06-18 01:23:48,831] [pool-1-thread-7] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-06-18 01:23:49,089] [pool-1-thread-9] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-06-18 01:23:49,274] [pool-1-thread-3] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-06-18 01:23:49,441] [pool-1-thread-4] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-06-18 01:23:49,549] [pool-1-thread-1] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-06-18 01:23:49,719] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0258.TIF: [testng] [2024-06-18 01:23:49,818] [pool-1-thread-8] Initializing 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[pool-1-thread-4] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-06-18 01:25:36,528] [pool-1-thread-7] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [2024-06-18 01:25:36,655] [pool-1-thread-9] Initializing /data/curtis/map/the-quick: [testng] [2024-06-18 01:25:36,870] [pool-1-thread-5] Initializing /data/pavel/Dmel/spim.pattern: [testng] [2024-06-18 01:25:38,235] [pool-1-thread-10] Initializing /data/imagesc-82872/SG11410002_253174651388_S001.tif: [testng] [2024-06-18 01:25:38,445] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-06-18 01:25:38,474] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-06-18 01:25:38,675] [pool-1-thread-7] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] [2024-06-18 01:25:38,818] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z035.tif: [testng] [2024-06-18 01:25:38,919] [pool-1-thread-9] Initializing 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Initializing /data/lzw/test.tif: [testng] [2024-06-18 01:25:39,991] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-06-18 01:25:40,017] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-06-18 01:25:40,042] [pool-1-thread-11] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-06-18 01:25:40,095] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-06-18 01:25:40,150] [pool-1-thread-6] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-06-18 01:25:42,470] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-06-18 01:25:42,530] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-06-18 01:25:42,597] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-06-18 01:25:42,622] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-06-18 01:25:42,728] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-06-18 01:25:43,106] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-06-18 01:25:43,270] [pool-1-thread-7] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-06-18 01:25:43,355] [pool-1-thread-1] Initializing /data/josiah/cell-Z7.C0.tiff: [testng] [2024-06-18 01:25:43,419] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP1.tiff: [testng] [2024-06-18 01:25:43,709] [pool-1-thread-11] Initializing /data/josiah/cell-Z18.C0.tiff: [testng] [2024-06-18 01:25:43,748] [pool-1-thread-8] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-06-18 01:25:43,807] [pool-1-thread-4] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-06-18 01:25:44,046] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-06-18 01:25:44,119] [pool-1-thread-7] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-06-18 01:25:44,359] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] [2024-06-18 01:25:44,407] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-06-18 01:25:44,448] [pool-1-thread-1] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-06-18 01:25:44,536] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-06-18 01:25:44,617] [pool-1-thread-7] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-06-18 01:25:44,971] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-06-18 01:25:45,117] [pool-1-thread-8] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-06-18 01:25:45,227] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-06-18 01:25:45,432] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-06-18 01:25:45,915] [pool-1-thread-11] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-06-18 01:25:46,051] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z017.tif: [testng] [2024-06-18 01:25:46,185] [pool-1-thread-4] Initializing /data/misc/ms-paint.png: [testng] [2024-06-18 01:25:46,229] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-06-18 01:25:46,502] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z015.tif: [testng] [2024-06-18 01:25:46,618] [pool-1-thread-8] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-06-18 01:25:46,773] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-06-18 01:25:46,967] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] [2024-06-18 01:25:47,220] [pool-1-thread-9] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-06-18 01:25:47,414] [pool-1-thread-4] Initializing /data/damian/18m.tiff: [testng] [2024-06-18 01:25:47,570] [pool-1-thread-11] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-06-18 01:25:47,966] [pool-1-thread-4] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-06-18 01:25:48,131] [pool-1-thread-8] Initializing /data/big-images/2kx2k.tif: [testng] [2024-06-18 01:25:48,410] [pool-1-thread-11] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-06-18 01:25:48,483] [pool-1-thread-4] Initializing /data/jeff/test36b.tif: [testng] [2024-06-18 01:25:48,793] [pool-1-thread-4] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-06-18 01:25:49,390] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-06-18 01:25:49,789] [pool-1-thread-11] Initializing /data/stephane/P014.tif: [testng] [2024-06-18 01:25:49,948] [pool-1-thread-4] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-06-18 01:25:50,255] [pool-1-thread-5] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-06-18 01:25:50,458] [pool-1-thread-2] Initializing /data/curtis/test1.tiff: [testng] [2024-06-18 01:25:50,804] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-06-18 01:25:50,836] [pool-1-thread-11] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-06-18 01:25:50,952] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z005.tif: [testng] [2024-06-18 01:25:51,342] [pool-1-thread-5] Initializing /data/edward/TestDoc2.tif: [testng] [2024-06-18 01:25:51,685] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern8.tif: [testng] [2024-06-18 01:25:51,865] [pool-1-thread-4] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-06-18 01:25:52,053] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-06-18 01:25:52,323] [pool-1-thread-11] Initializing /data/martin/head.tif: [testng] [2024-06-18 01:25:52,398] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-06-18 01:25:52,476] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-06-18 01:25:52,515] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-06-18 01:25:52,584] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-06-18 01:25:52,607] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0233.TIF: [testng] [2024-06-18 01:25:52,820] [pool-1-thread-2] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-06-18 01:25:52,891] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-06-18 01:25:52,991] [pool-1-thread-11] Initializing /data/boguslaw/Arabidopsis_large.tif: [testng] [2024-06-18 01:25:53,122] [pool-1-thread-12] Initializing 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01:25:54,263] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-06-18 01:25:54,358] [pool-1-thread-8] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-06-18 01:25:54,566] [pool-1-thread-7] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] [2024-06-18 01:25:54,644] [pool-1-thread-4] Initializing /data/josiah/cell-Z26.C1.tiff: [testng] [2024-06-18 01:25:55,046] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-06-18 01:25:55,203] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-06-18 01:25:55,287] [pool-1-thread-11] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] [2024-06-18 01:25:55,459] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-06-18 01:25:55,581] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-06-18 01:25:55,626] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-06-18 01:25:55,814] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-06-18 01:25:56,014] [pool-1-thread-4] Initializing /data/curtis/clown.tif: [testng] [2024-06-18 01:25:56,174] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-06-18 01:25:56,348] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-06-18 01:25:56,455] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-06-18 01:25:56,485] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-06-18 01:25:56,675] [pool-1-thread-4] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-06-18 01:25:56,906] [pool-1-thread-5] Initializing /data/misc/mri-stack.tif: [testng] [2024-06-18 01:25:57,018] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] [2024-06-18 01:25:57,296] [pool-1-thread-2] Initializing /data/john/C100915-MA_AXIS_LEH_IMAGE_KIND_FLAT_ICE_3.tif: [testng] [2024-06-18 01:25:57,392] [pool-1-thread-5] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-06-18 01:25:57,539] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z042.tif: [testng] [2024-06-18 01:25:57,789] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-06-18 01:25:57,850] [pool-1-thread-5] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] [2024-06-18 01:25:58,097] [pool-1-thread-4] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-06-18 01:25:58,464] [pool-1-thread-2] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-06-18 01:25:58,620] [pool-1-thread-4] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-06-18 01:25:59,503] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] [2024-06-18 01:25:59,908] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-06-18 01:26:00,094] [pool-1-thread-12] Initializing /data/josiah/cell-Z12.C0.tiff: [testng] [2024-06-18 01:26:00,271] [pool-1-thread-8] Initializing /data/curtis/images24.tiff: [testng] [2024-06-18 01:26:00,463] [pool-1-thread-2] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-06-18 01:26:00,511] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs000.TIF: [testng] [2024-06-18 01:26:00,648] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-06-18 01:26:00,706] [pool-1-thread-8] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-06-18 01:26:00,846] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-06-18 01:26:00,863] [pool-1-thread-2] Initializing /data/jay/Cleared%2fStack.tif: [testng] [2024-06-18 01:26:00,901] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-06-18 01:26:01,155] [pool-1-thread-7] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] [2024-06-18 01:26:01,220] [pool-1-thread-8] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-06-18 01:26:01,486] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 5 seconds Finished: SUCCESS