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Started by upstream project "BIOFORMATS-test-repo" build number 97
originally caused by:
 Started by upstream project "Trigger" build number 108
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins10050577157286549044.sh
+ '[' afi = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_14978_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:49:59,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:49:59,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:49:59,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:49:59,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:49:59,536 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:49:59,537 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:49:59,537 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:49:59,538 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:49:59,538 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5e600dd5 - End of configuration.
   [testng] 01:49:59,541 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@a38c7fe - Registering current configuration as safe fallback point
   [testng] 01:49:59,541 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6fdbe764 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 707 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-19 01:49:59,569] [main] java.version = 17.0.2
   [testng] 01:49:59,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:49:59,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:59,719 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-19_01-49-59.log]
   [testng] 01:49:59,723 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-06-19 01:49:59,743] [main] testng.directory = /data
   [testng] [2024-06-19 01:49:59,744] [main] testng.configDirectory = /config
   [testng] [2024-06-19 01:49:59,822] [main] testng.multiplier = 1.0
   [testng] [2024-06-19 01:49:59,824] [main] testng.in-memory = false
   [testng] [2024-06-19 01:49:59,824] [main] testng.allow-missing = false
   [testng] [2024-06-19 01:49:59,824] [main] user.language = en
   [testng] [2024-06-19 01:49:59,824] [main] user.country = ${user.country}
   [testng] [2024-06-19 01:49:59,825] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-19 01:50:02,429] [main] ----------------------------------------
   [testng] [2024-06-19 01:50:02,429] [main] Total files: 16
   [testng] [2024-06-19 01:50:02,430] [main] Scan time: 2.604 s (162 ms/file)
   [testng] [2024-06-19 01:50:02,430] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 15 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-19 01:50:13,062] [pool-1-thread-1] Initializing /data/samples/5347.afi: 
   [testng] 01:50:13,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:50:13,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:13,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-19_01-50-13.log]
   [testng] 01:50:13,072 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bb17596 - End of configuration.
   [testng] [2024-06-19 01:50:13,370] [pool-1-thread-12] Initializing /data/samples/5414.afi: 
   [testng] 01:50:13,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:50:13,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:13,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-19_01-50-13.log]
   [testng] 01:50:13,376 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d81beff - End of configuration.
   [testng] [2024-06-19 01:50:13,805] [pool-1-thread-11] Initializing /data/samples/5407.afi: 
   [testng] 01:50:13,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:50:13,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:13,813 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-19_01-50-13.log]
   [testng] 01:50:13,816 |-INFO in ch.qos.logback.core.sift.SiftProcessor@396a3d07 - End of configuration.
   [testng] [2024-06-19 01:50:14,064] [pool-1-thread-10] Initializing /data/samples/5351.afi: 
   [testng] 01:50:14,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:50:14,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:14,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-19_01-50-14.log]
   [testng] 01:50:14,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f50db82 - End of configuration.
   [testng] [2024-06-19 01:50:14,356] [pool-1-thread-9] Initializing /data/samples/5343.afi: 
   [testng] 01:50:14,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:50:14,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:14,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-19_01-50-14.log]
   [testng] 01:50:14,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@764c4dc4 - End of configuration.
   [testng] [2024-06-19 01:50:14,575] [pool-1-thread-8] Initializing /data/samples/5383.afi: 
   [testng] 01:50:14,578 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:50:14,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:14,587 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-19_01-50-14.log]
   [testng] 01:50:14,589 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c939155 - End of configuration.
   [testng] [2024-06-19 01:50:14,826] [pool-1-thread-7] Initializing /data/samples/5440.afi: 
   [testng] 01:50:14,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:50:14,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:14,831 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-19_01-50-14.log]
   [testng] 01:50:14,833 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42a1d008 - End of configuration.
   [testng] [2024-06-19 01:50:15,058] [pool-1-thread-6] Initializing /data/samples/5358.afi: 
   [testng] 01:50:15,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:50:15,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:15,206 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-19_01-50-15.log]
   [testng] 01:50:15,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79cd3161 - End of configuration.
   [testng] [2024-06-19 01:50:15,333] [pool-1-thread-5] Initializing /data/samples/5365.afi: 
   [testng] 01:50:15,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:50:15,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:15,335 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-19_01-50-15.log]
   [testng] 01:50:15,336 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ff5e48b - End of configuration.
   [testng] [2024-06-19 01:50:15,579] [pool-1-thread-4] Initializing /data/samples/5446.afi: 
   [testng] 01:50:15,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:50:15,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:15,588 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-19_01-50-15.log]
   [testng] 01:50:15,590 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e45050f - End of configuration.
   [testng] [2024-06-19 01:50:15,840] [pool-1-thread-3] Initializing /data/samples/5371.afi: 
   [testng] 01:50:15,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:50:15,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:15,842 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-19_01-50-15.log]
   [testng] 01:50:15,843 |-INFO in ch.qos.logback.core.sift.SiftProcessor@266e64f7 - End of configuration.
   [testng] [2024-06-19 01:50:15,997] [pool-1-thread-2] Initializing /data/samples/5387.afi: 
   [testng] 01:50:15,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:50:15,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:50:15,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-19_01-50-15.log]
   [testng] 01:50:16,000 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66961918 - End of configuration.
   [testng] [2024-06-19 01:51:17,057] [pool-1-thread-6] Initializing /data/samples/5306.afi: 
   [testng] [2024-06-19 01:51:18,294] [pool-1-thread-4] Initializing /data/samples/5400.afi: 
   [testng] [2024-06-19 01:51:20,707] [pool-1-thread-5] Initializing /data/samples/5339.afi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 795, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 2 minutes 41 seconds
Finished: SUCCESS