Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 98
originally caused by:
 Started by upstream project "Trigger" build number 109
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins10485394865976323562.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_15072_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] 4 warnings

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:20:56,210 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:20:56,213 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
   [testng] 01:20:56,213 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:20:56,214 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:20:56,215 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:20:56,216 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:20:56,217 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:20:56,217 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:20:56,218 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:20:56,219 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:20:56,220 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:20:56,220 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:20:56,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:20:56,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:20:56,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:20:56,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:20:56,523 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:20:56,523 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:20:56,523 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:20:56,524 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:20:56,524 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
   [testng] 01:20:56,525 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
   [testng] 01:20:56,525 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 307 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-20 01:20:56,541] [main] java.version = 21
   [testng] 01:20:56,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:20:56,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:20:56,619 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-20_01-20-56.log]
   [testng] 01:20:56,622 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
   [testng] [2024-06-20 01:20:56,625] [main] testng.directory = /data
   [testng] [2024-06-20 01:20:56,626] [main] testng.configDirectory = /config
   [testng] [2024-06-20 01:20:56,645] [main] testng.multiplier = 1.0
   [testng] [2024-06-20 01:20:56,646] [main] testng.in-memory = false
   [testng] [2024-06-20 01:20:56,647] [main] testng.allow-missing = false
   [testng] [2024-06-20 01:20:56,647] [main] user.language = en
   [testng] [2024-06-20 01:20:56,647] [main] user.country = ${user.country}
   [testng] [2024-06-20 01:20:56,647] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-20 01:21:14,285] [main] ----------------------------------------
   [testng] [2024-06-20 01:21:14,285] [main] Total files: 283
   [testng] [2024-06-20 01:21:14,285] [main] Scan time: 17.638 s (62 ms/file)
   [testng] [2024-06-20 01:21:14,286] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 186 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-20 01:29:29,139] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir: 
   [testng] 01:29:29,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:29:29,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:29,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-20_01-29-29.log]
   [testng] 01:29:29,141 |-INFO in ch.qos.logback.core.sift.SiftProcessor@526de868 - End of configuration.
   [testng] [2024-06-20 01:29:30,388] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: 
   [testng] 01:29:30,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:29:30,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:30,389 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-20_01-29-30.log]
   [testng] 01:29:30,389 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e0bf920 - End of configuration.
   [testng] [2024-06-20 01:29:30,486] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] 01:29:30,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:29:30,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:30,487 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-20_01-29-30.log]
   [testng] 01:29:30,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@444daf68 - End of configuration.
   [testng] [2024-06-20 01:29:30,960] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] 01:29:30,960 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:29:30,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:30,961 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-20_01-29-30.log]
   [testng] 01:29:30,962 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43f659cc - End of configuration.
   [testng] [2024-06-20 01:29:31,005] [pool-1-thread-9] Initializing /data/qa-17919/f10187.oir: 
   [testng] 01:29:31,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:29:31,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:31,006 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-20_01-29-31.log]
   [testng] 01:29:31,006 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54dfff91 - End of configuration.
   [testng] [2024-06-20 01:29:50,603] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir: 
   [testng] 01:29:50,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:29:50,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:50,605 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-20_01-29-50.log]
   [testng] 01:29:50,606 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f468f66 - End of configuration.
   [testng] [2024-06-20 01:29:50,989] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] 01:29:50,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:29:50,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:50,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-20_01-29-50.log]
   [testng] 01:29:50,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27e42a28 - End of configuration.
   [testng] [2024-06-20 01:29:51,055] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] 01:29:51,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:29:51,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:51,056 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-20_01-29-51.log]
   [testng] 01:29:51,057 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bbebd20 - End of configuration.
   [testng] [2024-06-20 01:29:51,149] [pool-1-thread-5] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] 01:29:51,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:29:51,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:51,150 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-20_01-29-51.log]
   [testng] 01:29:51,150 |-INFO in ch.qos.logback.core.sift.SiftProcessor@282b19bc - End of configuration.
   [testng] [2024-06-20 01:30:14,537] [pool-1-thread-4] Initializing /data/qa-17335/1.ome.tif: 
   [testng] 01:30:14,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:30:14,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:14,539 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-20_01-30-14.log]
   [testng] 01:30:14,540 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37249209 - End of configuration.
   [testng] [2024-06-20 01:30:14,605] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] 01:30:14,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:30:14,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:14,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-20_01-30-14.log]
   [testng] 01:30:14,606 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41b3b117 - End of configuration.
   [testng] [2024-06-20 01:30:14,666] [pool-1-thread-2] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: 
   [testng] 01:30:14,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:30:14,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:14,667 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-20_01-30-14.log]
   [testng] 01:30:14,668 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3734280f - End of configuration.
   [testng] [2024-06-20 01:30:17,609] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2024-06-20 01:30:17,729] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2024-06-20 01:30:18,120] [pool-1-thread-6] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] [2024-06-20 01:30:18,222] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2024-06-20 01:30:18,305] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] [2024-06-20 01:30:18,540] [pool-1-thread-10] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2024-06-20 01:30:25,384] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] [2024-06-20 01:30:25,733] [pool-1-thread-11] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2024-06-20 01:30:25,977] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] [2024-06-20 01:30:27,260] [pool-1-thread-3] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2024-06-20 01:30:27,392] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] [2024-06-20 01:30:27,948] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2024-06-20 01:30:28,297] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2024-06-20 01:30:28,662] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] [2024-06-20 01:30:29,101] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] [2024-06-20 01:30:29,391] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] [2024-06-20 01:30:29,480] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2024-06-20 01:30:29,550] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2024-06-20 01:30:30,041] [pool-1-thread-2] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2024-06-20 01:30:30,276] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2024-06-20 01:30:30,898] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2024-06-20 01:30:31,203] [pool-1-thread-12] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2024-06-20 01:31:04,336] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] [2024-06-20 01:31:04,718] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2024-06-20 01:31:04,802] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2024-06-20 01:31:04,910] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] [2024-06-20 01:31:06,210] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2024-06-20 01:31:06,787] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] [2024-06-20 01:31:07,646] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] [2024-06-20 01:31:08,049] [pool-1-thread-6] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] [2024-06-20 01:31:08,374] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2024-06-20 01:31:09,010] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2024-06-20 01:31:10,117] [pool-1-thread-8] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2024-06-20 01:31:10,700] [pool-1-thread-7] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2024-06-20 01:31:10,983] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2024-06-20 01:31:11,126] [pool-1-thread-2] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2024-06-20 01:31:12,363] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2024-06-20 01:31:12,759] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2024-06-20 01:31:13,060] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] [2024-06-20 01:31:13,203] [pool-1-thread-7] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2024-06-20 01:31:13,497] [pool-1-thread-3] Initializing /data/qa-17270/image1.oir: 
   [testng] [2024-06-20 01:31:13,784] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2024-06-20 01:31:14,067] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] [2024-06-20 01:31:14,359] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] [2024-06-20 01:31:14,791] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2024-06-20 01:31:15,053] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2024-06-20 01:31:15,251] [pool-1-thread-1] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2024-06-20 01:31:15,444] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2024-06-20 01:31:16,181] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2024-06-20 01:31:16,359] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] [2024-06-20 01:31:16,670] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] [2024-06-20 01:31:17,181] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] [2024-06-20 01:31:17,389] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2024-06-20 01:31:17,677] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2024-06-20 01:31:18,115] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2024-06-20 01:31:18,538] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2024-06-20 01:31:18,685] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2024-06-20 01:31:18,794] [pool-1-thread-2] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2024-06-20 01:31:19,429] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2024-06-20 01:31:20,320] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] [2024-06-20 01:31:20,794] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] [2024-06-20 01:31:21,600] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] [2024-06-20 01:31:22,236] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] [2024-06-20 01:31:22,877] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2024-06-20 01:31:23,068] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2024-06-20 01:31:23,436] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2024-06-20 01:31:24,040] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] [2024-06-20 01:31:24,462] [pool-1-thread-7] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2024-06-20 01:31:25,701] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2024-06-20 01:31:26,309] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2024-06-20 01:31:27,393] [pool-1-thread-6] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2024-06-20 01:31:27,483] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2024-06-20 01:31:27,555] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2024-06-20 01:31:27,662] [pool-1-thread-11] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2024-06-20 01:31:27,713] [pool-1-thread-4] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] [2024-06-20 01:31:28,782] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2024-06-20 01:31:29,066] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2024-06-20 01:31:29,210] [pool-1-thread-2] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] [2024-06-20 01:31:29,357] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2024-06-20 01:31:30,811] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2024-06-20 01:31:33,825] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2024-06-20 01:31:34,158] [pool-1-thread-2] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2024-06-20 01:31:35,420] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2024-06-20 01:31:35,896] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2024-06-20 01:31:36,297] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2024-06-20 01:31:42,027] [pool-1-thread-6] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2024-06-20 01:31:43,037] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2024-06-20 01:31:43,535] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2024-06-20 01:31:43,611] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2024-06-20 01:31:43,738] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] [2024-06-20 01:31:45,089] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2024-06-20 01:31:45,446] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2024-06-20 01:31:45,969] [pool-1-thread-4] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2024-06-20 01:31:46,347] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2024-06-20 01:31:46,803] [pool-1-thread-7] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2024-06-20 01:31:48,039] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2024-06-20 01:31:48,242] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2024-06-20 01:31:48,947] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] [2024-06-20 01:31:49,583] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2024-06-20 01:31:49,727] [pool-1-thread-6] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2024-06-20 01:31:50,152] [pool-1-thread-10] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2024-06-20 01:31:50,680] [pool-1-thread-4] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] [2024-06-20 01:31:51,177] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] [2024-06-20 01:31:51,623] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2024-06-20 01:31:52,171] [pool-1-thread-4] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2024-06-20 01:31:53,983] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] [2024-06-20 01:31:54,100] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.oir: 
   [testng] [2024-06-20 01:31:54,334] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] [2024-06-20 01:31:54,600] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] [2024-06-20 01:31:55,618] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2024-06-20 01:31:55,939] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2024-06-20 01:31:56,092] [pool-1-thread-11] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2024-06-20 01:31:56,193] [pool-1-thread-7] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2024-06-20 01:31:56,632] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] [2024-06-20 01:31:58,036] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2024-06-20 01:31:58,121] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] [2024-06-20 01:31:58,227] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2024-06-20 01:31:59,318] [pool-1-thread-7] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] [2024-06-20 01:31:59,435] [pool-1-thread-11] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2024-06-20 01:31:59,581] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2024-06-20 01:31:59,915] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] [2024-06-20 01:32:00,547] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2024-06-20 01:32:01,068] [pool-1-thread-11] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] [2024-06-20 01:33:02,993] [pool-1-thread-7] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2024-06-20 01:33:03,381] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2024-06-20 01:33:03,543] [pool-1-thread-1] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2024-06-20 01:33:03,762] [pool-1-thread-3] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2024-06-20 01:33:06,462] [pool-1-thread-7] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2024-06-20 01:33:06,817] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2024-06-20 01:33:07,517] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2024-06-20 01:33:07,938] [pool-1-thread-4] Initializing /data/qa-17335/1.oir: 
   [testng] [2024-06-20 01:33:08,051] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2024-06-20 01:33:12,370] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] [2024-06-20 01:33:16,191] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] [2024-06-20 01:33:16,420] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] [2024-06-20 01:33:17,101] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2024-06-20 01:33:17,792] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2024-06-20 01:33:18,345] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2024-06-20 01:33:18,578] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] [2024-06-20 01:33:19,803] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] [2024-06-20 01:33:20,098] [pool-1-thread-6] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2024-06-20 01:33:20,220] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] [2024-06-20 01:33:20,839] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2024-06-20 01:33:21,613] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2024-06-20 01:33:22,263] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2024-06-20 01:33:22,362] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2024-06-20 01:33:23,303] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2024-06-20 01:33:23,797] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] [2024-06-20 01:33:24,655] [pool-1-thread-6] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2024-06-20 01:33:24,851] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2024-06-20 01:33:25,503] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] [2024-06-20 01:33:27,948] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] [2024-06-20 01:33:28,503] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2024-06-20 01:33:29,027] [pool-1-thread-4] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] [2024-06-20 01:33:29,087] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2024-06-20 01:33:29,815] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] [2024-06-20 01:33:30,284] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2024-06-20 01:33:30,563] [pool-1-thread-10] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2024-06-20 01:33:31,473] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] [2024-06-20 01:33:31,517] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2024-06-20 01:33:31,721] [pool-1-thread-2] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2024-06-20 01:33:31,917] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] [2024-06-20 01:33:32,772] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] [2024-06-20 01:33:33,135] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2024-06-20 01:33:33,632] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] [2024-06-20 01:33:34,808] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] [2024-06-20 01:33:34,917] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2024-06-20 01:33:35,433] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2024-06-20 01:33:35,718] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] [2024-06-20 01:33:36,188] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] [2024-06-20 01:33:36,864] [pool-1-thread-10] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] [2024-06-20 01:33:37,237] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2024-06-20 01:33:37,622] [pool-1-thread-2] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] [2024-06-20 01:33:38,373] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 9858, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 51 minutes 31 seconds
Finished: SUCCESS