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Started by upstream project "BIOFORMATS-test-repo" build number 10
originally caused by:
 Started by upstream project "Trigger" build number 13
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins18129701548971719702.sh
+ '[' afi = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_1527_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:06:06,051 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:06:06,053 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:06:06,053 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:06:06,055 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:06:06,056 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:06:06,056 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:06:06,057 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:06:06,057 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:06:06,058 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:06:06,059 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:06:06,059 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:06:06,060 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:06:06,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:06:06,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:06:06,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:06:06,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:06:06,401 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:06:06,402 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:06:06,402 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:06:06,403 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:06:06,404 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:06:06,406 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:06:06,407 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 349 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-03-24 01:06:06,430] [main] java.version = 17.0.2
   [testng] 01:06:06,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:06:06,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:06,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-24_01-06-06.log]
   [testng] 01:06:06,544 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-03-24 01:06:06,547] [main] testng.directory = /data
   [testng] [2024-03-24 01:06:06,547] [main] testng.configDirectory = /config
   [testng] [2024-03-24 01:06:06,557] [main] testng.multiplier = 1.0
   [testng] [2024-03-24 01:06:06,558] [main] testng.in-memory = false
   [testng] [2024-03-24 01:06:06,558] [main] testng.allow-missing = false
   [testng] [2024-03-24 01:06:06,558] [main] user.language = en
   [testng] [2024-03-24 01:06:06,558] [main] user.country = ${user.country}
   [testng] [2024-03-24 01:06:06,558] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-03-24 01:06:07,385] [main] ----------------------------------------
   [testng] [2024-03-24 01:06:07,385] [main] Total files: 16
   [testng] [2024-03-24 01:06:07,385] [main] Scan time: 0.826 s (51 ms/file)
   [testng] [2024-03-24 01:06:07,386] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 15 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-03-24 01:06:23,633] [pool-1-thread-1] Initializing /data/samples/5347.afi: 
   [testng] 01:06:23,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:06:23,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:23,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-24_01-06-23.log]
   [testng] 01:06:23,636 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d0888fb - End of configuration.
   [testng] [2024-03-24 01:06:23,973] [pool-1-thread-12] Initializing /data/samples/5414.afi: 
   [testng] 01:06:23,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:06:23,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:23,975 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-24_01-06-23.log]
   [testng] 01:06:23,975 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c462358 - End of configuration.
   [testng] [2024-03-24 01:06:24,281] [pool-1-thread-11] Initializing /data/samples/5407.afi: 
   [testng] 01:06:24,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:06:24,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:24,283 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-24_01-06-24.log]
   [testng] 01:06:24,283 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5695539f - End of configuration.
   [testng] [2024-03-24 01:06:24,600] [pool-1-thread-10] Initializing /data/samples/5351.afi: 
   [testng] 01:06:24,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:06:24,602 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:24,603 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-24_01-06-24.log]
   [testng] 01:06:24,604 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62dce629 - End of configuration.
   [testng] [2024-03-24 01:06:24,897] [pool-1-thread-9] Initializing /data/samples/5343.afi: 
   [testng] 01:06:24,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:06:24,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:24,899 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-24_01-06-24.log]
   [testng] 01:06:24,899 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c3bfebd - End of configuration.
   [testng] [2024-03-24 01:06:25,088] [pool-1-thread-8] Initializing /data/samples/5383.afi: 
   [testng] 01:06:25,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:06:25,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:25,090 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-24_01-06-25.log]
   [testng] 01:06:25,090 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ffc12ef - End of configuration.
   [testng] [2024-03-24 01:06:25,245] [pool-1-thread-7] Initializing /data/samples/5440.afi: 
   [testng] 01:06:25,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:06:25,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:25,249 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-24_01-06-25.log]
   [testng] 01:06:25,250 |-INFO in ch.qos.logback.core.sift.SiftProcessor@357339e6 - End of configuration.
   [testng] [2024-03-24 01:06:25,446] [pool-1-thread-6] Initializing /data/samples/5358.afi: 
   [testng] 01:06:25,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:06:25,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:25,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-24_01-06-25.log]
   [testng] 01:06:25,449 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e6f0245 - End of configuration.
   [testng] [2024-03-24 01:06:25,652] [pool-1-thread-5] Initializing /data/samples/5365.afi: 
   [testng] 01:06:25,653 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:06:25,653 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:25,654 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-24_01-06-25.log]
   [testng] 01:06:25,654 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ba2cebc - End of configuration.
   [testng] [2024-03-24 01:06:25,889] [pool-1-thread-4] Initializing /data/samples/5446.afi: 
   [testng] 01:06:25,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:06:25,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:25,891 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-24_01-06-25.log]
   [testng] 01:06:25,892 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74b1f578 - End of configuration.
   [testng] [2024-03-24 01:06:26,105] [pool-1-thread-3] Initializing /data/samples/5371.afi: 
   [testng] 01:06:26,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:06:26,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:26,107 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-24_01-06-26.log]
   [testng] 01:06:26,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15647d95 - End of configuration.
   [testng] [2024-03-24 01:06:26,424] [pool-1-thread-2] Initializing /data/samples/5387.afi: 
   [testng] 01:06:26,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:06:26,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:06:26,426 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-24_01-06-26.log]
   [testng] 01:06:26,427 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a927300 - End of configuration.
   [testng] [2024-03-24 01:07:23,029] [pool-1-thread-6] Initializing /data/samples/5306.afi: 
   [testng] [2024-03-24 01:07:25,975] [pool-1-thread-4] Initializing /data/samples/5400.afi: 
   [testng] [2024-03-24 01:07:29,087] [pool-1-thread-5] Initializing /data/samples/5339.afi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 795, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 2 minutes 28 seconds
Finished: SUCCESS