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Started by upstream project "BIOFORMATS-test-repo" build number 99 originally caused by: Started by upstream project "Trigger" build number 110 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins14746635894732810180.sh + '[' apng = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_15352_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:28:22,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:28:22,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:28:22,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:28:22,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:28:22,667 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:28:22,667 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:28:22,667 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:28:22,668 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:28:22,668 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:28:22,669 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:28:22,669 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 829 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-21 02:28:22,684] [main] java.version = 1.8.0_342 [testng] 02:28:22,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:28:22,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:22,962 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-21_02-28-22.log] [testng] 02:28:22,965 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-06-21 02:28:22,983] [main] testng.directory = /data [testng] [2024-06-21 02:28:22,983] [main] testng.configDirectory = /config [testng] [2024-06-21 02:28:23,061] [main] testng.multiplier = 1.0 [testng] [2024-06-21 02:28:23,062] [main] testng.in-memory = false [testng] [2024-06-21 02:28:23,062] [main] testng.allow-missing = false [testng] [2024-06-21 02:28:23,062] [main] user.language = en [testng] [2024-06-21 02:28:23,062] [main] user.country = ${user.country} [testng] [2024-06-21 02:28:23,062] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-06-21 02:28:23,901] [main] ---------------------------------------- [testng] [2024-06-21 02:28:23,901] [main] Total files: 21 [testng] [2024-06-21 02:28:23,901] [main] Scan time: 0.839 s (39 ms/file) [testng] [2024-06-21 02:28:23,901] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-21 02:28:25,499] [pool-1-thread-1] Initializing /data/samples/Sun.png: [testng] 02:28:25,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:28:25,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-21_02-28-25.log] [testng] 02:28:25,501 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70004006 - End of configuration. [testng] [2024-06-21 02:28:25,602] [pool-1-thread-12] Initializing /data/samples/atom.png: [testng] 02:28:25,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:28:25,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,605 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-21_02-28-25.log] [testng] 02:28:25,606 |-INFO in ch.qos.logback.core.sift.SiftProcessor@495c70b5 - End of configuration. [testng] [2024-06-21 02:28:25,613] [pool-1-thread-11] Initializing /data/samples/orbit.png: [testng] 02:28:25,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:28:25,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,614 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-21_02-28-25.log] [testng] 02:28:25,615 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e882c94 - End of configuration. [testng] [2024-06-21 02:28:25,623] [pool-1-thread-10] Initializing /data/samples/monkey_apng.png: [testng] 02:28:25,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:28:25,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,624 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-21_02-28-25.log] [testng] 02:28:25,625 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59838a9a - End of configuration. [testng] [2024-06-21 02:28:25,635] [pool-1-thread-9] Initializing /data/qa-7473/x.png: [testng] 02:28:25,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:28:25,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,636 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-21_02-28-25.log] [testng] 02:28:25,637 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63bd4ac2 - End of configuration. [testng] [2024-06-21 02:28:25,643] [pool-1-thread-8] Initializing /data/samples/william_wong04.png: [testng] 02:28:25,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:28:25,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,644 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-21_02-28-25.log] [testng] 02:28:25,645 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c1ca999 - End of configuration. [testng] [2024-06-21 02:28:25,655] [pool-1-thread-7] Initializing /data/samples/daniel_coltri_two.png: [testng] 02:28:25,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:28:25,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,656 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-21_02-28-25.log] [testng] 02:28:25,656 |-INFO in ch.qos.logback.core.sift.SiftProcessor@880d151 - End of configuration. [testng] [2024-06-21 02:28:25,662] [pool-1-thread-6] Initializing /data/qa-7473/n.tif: [testng] 02:28:25,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:28:25,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,663 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-21_02-28-25.log] [testng] 02:28:25,664 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e23d1d1 - End of configuration. [testng] [2024-06-21 02:28:25,693] [pool-1-thread-5] Initializing /data/samples/MoonPhases.png: [testng] 02:28:25,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:28:25,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,694 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-21_02-28-25.log] [testng] 02:28:25,694 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c1f86fe - End of configuration. [testng] [2024-06-21 02:28:25,699] [pool-1-thread-4] Initializing /data/samples/joanna_viera01.png: [testng] 02:28:25,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:28:25,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,700 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-21_02-28-25.log] [testng] 02:28:25,701 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79cf8f32 - End of configuration. [testng] [2024-06-21 02:28:25,707] [pool-1-thread-3] Initializing /data/samples/Matrix.png: [testng] 02:28:25,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:28:25,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-21_02-28-25.log] [testng] 02:28:25,711 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a1e136 - End of configuration. [testng] [2024-06-21 02:28:25,738] [pool-1-thread-2] Initializing /data/samples/phug_logo.png: [testng] 02:28:25,738 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:28:25,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:25,739 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-21_02-28-25.log] [testng] 02:28:25,740 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d07845f - End of configuration. [testng] [2024-06-21 02:28:27,749] [pool-1-thread-4] Initializing /data/samples/william_wong02.png: [testng] [2024-06-21 02:28:27,757] [pool-1-thread-8] Initializing /data/samples/spinfox.png: [testng] [2024-06-21 02:28:27,763] [pool-1-thread-2] Initializing /data/samples/william_wong01.png: [testng] [2024-06-21 02:28:27,772] [pool-1-thread-3] Initializing /data/samples/william_wong05.png: [testng] [2024-06-21 02:28:27,780] [pool-1-thread-11] Initializing /data/colin/test.sfstdge.png: [testng] [2024-06-21 02:28:27,784] [pool-1-thread-5] Initializing /data/samples/daniel_coltri_one.png: [testng] [2024-06-21 02:28:27,792] [pool-1-thread-12] Initializing /data/samples/PhugAnimation3.png: [testng] [2024-06-21 02:28:27,802] [pool-1-thread-1] Initializing /data/samples/chompy2.png: [testng] [2024-06-21 02:28:27,805] [pool-1-thread-10] Initializing /data/samples/StarV838.png: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 16 seconds Finished: SUCCESS