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Started by upstream project "BIOFORMATS-test-repo" build number 100 originally caused by: Started by upstream project "Trigger" build number 111 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins11819239788160384059.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_15400_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 02:26:24,723 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:26:24,725 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 02:26:24,725 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:26:24,727 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:26:24,728 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:26:24,729 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:26:24,729 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:26:24,729 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:26:24,730 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:26:24,730 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:26:24,731 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:26:24,731 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:26:24,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:26:24,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:26:24,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:26:24,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:26:24,988 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:26:24,988 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:26:24,988 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:26:24,989 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:26:24,989 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 02:26:24,990 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 02:26:24,990 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 260 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-22 02:26:25,001] [main] java.version = 11.0.16 [testng] 02:26:25,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:26:25,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:25,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-22_02-26-25.log] [testng] 02:26:25,062 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-06-22 02:26:25,064] [main] testng.directory = /data [testng] [2024-06-22 02:26:25,065] [main] testng.configDirectory = /config [testng] [2024-06-22 02:26:25,080] [main] testng.multiplier = 1.0 [testng] [2024-06-22 02:26:25,081] [main] testng.in-memory = false [testng] [2024-06-22 02:26:25,082] [main] testng.allow-missing = false [testng] [2024-06-22 02:26:25,082] [main] user.language = en [testng] [2024-06-22 02:26:25,082] [main] user.country = ${user.country} [testng] [2024-06-22 02:26:25,082] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-22 02:26:37,916] [main] ---------------------------------------- [testng] [2024-06-22 02:26:37,916] [main] Total files: 283 [testng] [2024-06-22 02:26:37,916] [main] Scan time: 12.834 s (45 ms/file) [testng] [2024-06-22 02:26:37,916] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-22 02:34:31,533] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] 02:34:31,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:34:31,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:31,537 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-22_02-34-31.log] [testng] 02:34:31,538 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d19005f - End of configuration. [testng] [2024-06-22 02:34:32,005] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] 02:34:32,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:34:32,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:32,006 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-22_02-34-32.log] [testng] 02:34:32,007 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30f5051f - End of configuration. [testng] [2024-06-22 02:34:32,111] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] 02:34:32,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:34:32,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:32,112 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-22_02-34-32.log] [testng] 02:34:32,112 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a8d19ac - End of configuration. [testng] [2024-06-22 02:34:32,259] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] 02:34:32,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:34:32,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:32,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-22_02-34-32.log] [testng] 02:34:32,260 |-INFO in ch.qos.logback.core.sift.SiftProcessor@313acaef - End of configuration. [testng] [2024-06-22 02:34:32,330] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 02:34:32,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:34:32,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:32,332 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-22_02-34-32.log] [testng] 02:34:32,332 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a77352c - End of configuration. [testng] [2024-06-22 02:34:32,374] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 02:34:32,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:34:32,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:32,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-22_02-34-32.log] [testng] 02:34:32,376 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4909b300 - End of configuration. [testng] [2024-06-22 02:34:32,445] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] 02:34:32,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:34:32,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:32,447 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-22_02-34-32.log] [testng] 02:34:32,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b61a9c9 - End of configuration. [testng] [2024-06-22 02:34:32,629] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: [testng] 02:34:32,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:34:32,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:32,630 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-22_02-34-32.log] [testng] 02:34:32,630 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46830e1c - End of configuration. [testng] [2024-06-22 02:34:32,688] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 02:34:32,688 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:34:32,688 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:32,689 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-22_02-34-32.log] [testng] 02:34:32,690 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c931b4c - End of configuration. [testng] [2024-06-22 02:34:32,760] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] 02:34:32,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:34:32,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:32,761 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-22_02-34-32.log] [testng] 02:34:32,761 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1418c39b - End of configuration. [testng] [2024-06-22 02:34:35,192] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] 02:34:35,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:34:35,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:35,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-22_02-34-35.log] [testng] 02:34:35,193 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26f141f5 - End of configuration. [testng] [2024-06-22 02:34:35,266] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] 02:34:35,267 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:34:35,267 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:35,267 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-22_02-34-35.log] [testng] 02:34:35,267 |-INFO in ch.qos.logback.core.sift.SiftProcessor@370b8d43 - End of configuration. [testng] [2024-06-22 02:34:38,656] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-06-22 02:34:38,717] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-06-22 02:34:38,819] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-06-22 02:34:39,004] [pool-1-thread-10] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-06-22 02:34:39,149] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-06-22 02:34:39,256] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-06-22 02:34:39,325] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-06-22 02:34:40,100] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-06-22 02:34:40,235] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-06-22 02:34:40,424] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-06-22 02:34:40,847] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-06-22 02:34:41,808] [pool-1-thread-2] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-06-22 02:34:42,122] [pool-1-thread-10] Initializing /data/qa-17919/f10187.oir: [testng] [2024-06-22 02:34:58,987] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-06-22 02:34:59,378] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-06-22 02:34:59,461] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-06-22 02:34:59,507] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-06-22 02:34:59,712] [pool-1-thread-11] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-06-22 02:34:59,929] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-06-22 02:35:00,006] [pool-1-thread-9] Initializing /data/olympus/XYZt.vsi: [testng] [2024-06-22 02:35:01,027] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-06-22 02:35:01,255] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-06-22 02:35:01,293] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-06-22 02:35:01,620] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2024-06-22 02:35:01,677] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-06-22 02:35:01,729] [pool-1-thread-2] Initializing /data/qa-17270/stack1.oir: [testng] [2024-06-22 02:35:03,444] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-06-22 02:35:03,697] [pool-1-thread-1] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-06-22 02:35:07,865] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-06-22 02:35:08,106] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-06-22 02:35:08,328] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-06-22 02:35:08,787] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-06-22 02:35:09,710] [pool-1-thread-7] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-06-22 02:35:10,309] [pool-1-thread-11] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-06-22 02:35:10,434] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-06-22 02:35:10,538] [pool-1-thread-9] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-06-22 02:35:10,883] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-06-22 02:35:10,964] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-06-22 02:35:11,852] [pool-1-thread-5] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-06-22 02:35:12,953] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-06-22 02:35:13,138] [pool-1-thread-8] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-06-22 02:35:13,390] [pool-1-thread-6] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] 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Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-06-22 02:35:21,128] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-06-22 02:35:21,319] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-06-22 02:35:21,395] [pool-1-thread-9] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2024-06-22 02:35:22,437] [pool-1-thread-8] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-06-22 02:35:22,515] [pool-1-thread-6] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-06-22 02:35:22,931] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2024-06-22 02:35:23,176] [pool-1-thread-3] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-06-22 02:35:23,272] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2024-06-22 02:35:23,378] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-06-22 02:35:23,756] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-06-22 02:35:25,692] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-06-22 02:35:25,865] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-06-22 02:35:26,122] [pool-1-thread-2] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-06-22 02:35:26,486] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2024-06-22 02:35:26,840] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-06-22 02:35:27,058] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-06-22 02:35:27,223] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-06-22 02:35:27,295] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-06-22 02:35:28,133] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-06-22 02:35:28,581] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-06-22 02:35:28,677] [pool-1-thread-6] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-06-22 02:35:28,901] [pool-1-thread-3] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-06-22 02:35:29,080] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-06-22 02:35:29,722] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-06-22 02:35:30,051] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-06-22 02:35:30,787] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-06-22 02:35:32,269] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-06-22 02:35:32,576] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-06-22 02:35:33,109] [pool-1-thread-9] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-06-22 02:35:33,735] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-06-22 02:35:37,918] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-06-22 02:35:38,266] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-06-22 02:35:38,556] [pool-1-thread-3] Initializing 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02:35:42,965] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2024-06-22 02:35:43,181] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-06-22 02:35:43,266] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-06-22 02:35:44,035] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-06-22 02:35:46,629] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2024-06-22 02:35:46,876] [pool-1-thread-1] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-06-22 02:36:33,601] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-06-22 02:36:33,854] [pool-1-thread-7] Initializing 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/data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-06-22 02:36:53,755] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-06-22 02:36:54,583] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] [2024-06-22 02:36:54,675] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-06-22 02:36:55,003] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-06-22 02:36:55,491] [pool-1-thread-3] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-06-22 02:36:56,472] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-06-22 02:36:56,642] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-06-22 02:36:56,897] [pool-1-thread-7] Initializing /data/qa-17917/f10010.oir: [testng] [2024-06-22 02:37:20,551] [pool-1-thread-2] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-06-22 02:37:21,256] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-06-22 02:37:21,351] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-06-22 02:37:21,545] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-06-22 02:37:22,630] [pool-1-thread-4] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-06-22 02:37:22,724] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-06-22 02:37:22,786] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-06-22 02:37:24,089] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-06-22 02:37:24,311] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-06-22 02:37:25,144] [pool-1-thread-4] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-06-22 02:37:25,943] [pool-1-thread-3] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-06-22 02:37:26,203] [pool-1-thread-8] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-06-22 02:37:26,401] [pool-1-thread-5] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-06-22 02:37:27,952] [pool-1-thread-8] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-06-22 02:37:27,967] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-06-22 02:37:28,236] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-06-22 02:37:29,618] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-06-22 02:37:29,980] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-06-22 02:37:30,861] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-06-22 02:37:31,284] [pool-1-thread-3] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-06-22 02:37:31,795] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-06-22 02:37:32,179] [pool-1-thread-4] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-06-22 02:37:32,424] [pool-1-thread-6] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-06-22 02:37:33,752] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-06-22 02:37:33,831] [pool-1-thread-12] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-06-22 02:37:34,431] [pool-1-thread-5] Initializing /data/qa-17335/1.oir: [testng] [2024-06-22 02:37:34,690] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-06-22 02:37:35,079] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-06-22 02:37:35,460] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-06-22 02:37:35,607] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-06-22 02:37:36,022] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-06-22 02:37:36,566] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-06-22 02:37:37,008] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-06-22 02:37:37,267] [pool-1-thread-8] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-06-22 02:37:37,413] [pool-1-thread-12] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-06-22 02:37:38,049] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-06-22 02:37:38,265] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-06-22 02:37:38,531] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-06-22 02:37:38,600] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-06-22 02:37:39,470] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-06-22 02:37:39,842] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-06-22 02:37:40,008] [pool-1-thread-5] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-06-22 02:37:40,081] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-06-22 02:37:41,020] [pool-1-thread-12] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-06-22 02:37:41,118] [pool-1-thread-3] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-06-22 02:37:41,489] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-06-22 02:37:41,621] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-06-22 02:37:42,478] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-06-22 02:37:43,037] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-06-22 02:37:43,418] [pool-1-thread-6] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-06-22 02:37:43,514] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-06-22 02:37:43,739] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-06-22 02:37:43,905] [pool-1-thread-5] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-06-22 02:37:48,093] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-06-22 02:37:48,544] [pool-1-thread-8] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-06-22 02:37:48,828] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-06-22 02:37:48,957] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 43 minutes 18 seconds Finished: SUCCESS