![[Jenkins]](/jenkins/static/a67f30f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 102 originally caused by: Started by upstream project "Trigger" build number 113 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins13635616808433174586.sh + '[' imagepro = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_15875_merge_ci -v /uod/idr/repos/curated/imagepro:/data -v /uod/idr-scratch/merge-ci/curated/imagepro:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:50:54,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:50:54,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:50:54,591 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:50:54,591 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:50:54,604 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:50:54,605 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:50:54,605 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:50:54,606 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:50:54,606 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:50:54,607 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:50:54,607 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 471 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-24 02:50:54,623] [main] java.version = 1.8.0_342 [testng] 02:50:54,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:50:54,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:50:54,702 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-24_02-50-54.log] [testng] 02:50:54,704 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-06-24 02:50:54,706] [main] testng.directory = /data [testng] [2024-06-24 02:50:54,706] [main] testng.configDirectory = /config [testng] [2024-06-24 02:50:54,719] [main] testng.multiplier = 1.0 [testng] [2024-06-24 02:50:54,719] [main] testng.in-memory = false [testng] [2024-06-24 02:50:54,719] [main] testng.allow-missing = false [testng] [2024-06-24 02:50:54,719] [main] user.language = fr [testng] [2024-06-24 02:50:54,719] [main] user.country = FR [testng] [2024-06-24 02:50:54,720] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-06-24 02:50:55,972] [main] ---------------------------------------- [testng] [2024-06-24 02:50:55,972] [main] Total files: 22 [testng] [2024-06-24 02:50:55,972] [main] Scan time: 1.252 s (56 ms/file) [testng] [2024-06-24 02:50:55,972] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-24 02:51:03,546] [pool-1-thread-1] Initializing /data/converted/clown8c.seq: [testng] 02:51:03,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:51:03,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,548 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-24_02-51-03.log] [testng] 02:51:03,548 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24d8fb26 - End of configuration. [testng] [2024-06-24 02:51:03,597] [pool-1-thread-12] Initializing /data/converted/NESb_C2_TP7.seq: [testng] 02:51:03,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:51:03,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-24_02-51-03.log] [testng] 02:51:03,598 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f181f7 - End of configuration. [testng] [2024-06-24 02:51:03,621] [pool-1-thread-11] Initializing /data/converted/mitosis-test.tif: [testng] 02:51:03,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:51:03,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,622 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-24_02-51-03.log] [testng] 02:51:03,622 |-INFO in ch.qos.logback.core.sift.SiftProcessor@163312f6 - End of configuration. [testng] [2024-06-24 02:51:03,742] [pool-1-thread-10] Initializing /data/converted/clown.seq: [testng] 02:51:03,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:51:03,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,743 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-24_02-51-03.log] [testng] 02:51:03,743 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71ba798f - End of configuration. [testng] [2024-06-24 02:51:03,756] [pool-1-thread-9] Initializing /data/alex/AFAset0003.ips: [testng] 02:51:03,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:51:03,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,757 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-24_02-51-03.log] [testng] 02:51:03,757 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d98d1f2 - End of configuration. [testng] [2024-06-24 02:51:03,771] [pool-1-thread-8] Initializing /data/converted/NESb_C2_TP7.tiff: [testng] 02:51:03,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:51:03,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,772 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-24_02-51-03.log] [testng] 02:51:03,772 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67e78a81 - End of configuration. [testng] [2024-06-24 02:51:03,825] [pool-1-thread-7] Initializing /data/samples/PROBE.TIF: [testng] 02:51:03,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:51:03,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,826 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-24_02-51-03.log] [testng] 02:51:03,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@509b8eff - End of configuration. [testng] [2024-06-24 02:51:03,841] [pool-1-thread-6] Initializing /data/converted/dub01.ipw: [testng] 02:51:03,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:51:03,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,842 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-24_02-51-03.log] [testng] 02:51:03,843 |-INFO in ch.qos.logback.core.sift.SiftProcessor@214593ca - End of configuration. [testng] [2024-06-24 02:51:03,875] [pool-1-thread-5] Initializing /data/converted/NESb_C2_TP7.ipw: [testng] 02:51:03,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:51:03,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-24_02-51-03.log] [testng] 02:51:03,878 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79b07596 - End of configuration. [testng] [2024-06-24 02:51:03,901] [pool-1-thread-4] Initializing /data/xiuwen/head2.seq: [testng] 02:51:03,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:51:03,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:03,902 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-24_02-51-03.log] [testng] 02:51:03,902 |-INFO in ch.qos.logback.core.sift.SiftProcessor@612365d - End of configuration. [testng] [2024-06-24 02:51:04,014] [pool-1-thread-3] Initializing /data/converted/clown8c.ipw: [testng] 02:51:04,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:51:04,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:04,023 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-24_02-51-04.log] [testng] 02:51:04,024 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6cf7e892 - End of configuration. [testng] [2024-06-24 02:51:04,040] [pool-1-thread-2] Initializing /data/converted/dub01.seq: [testng] 02:51:04,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:51:04,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:51:04,041 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-24_02-51-04.log] [testng] 02:51:04,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e2225c2 - End of configuration. [testng] [2024-06-24 02:51:07,044] [pool-1-thread-10] Initializing /data/converted/dub01.pic: [testng] [2024-06-24 02:51:07,078] [pool-1-thread-3] Initializing /data/samples/FLDUAL.TIF: [testng] [2024-06-24 02:51:07,122] [pool-1-thread-1] Initializing /data/converted/clown.tif: [testng] [2024-06-24 02:51:07,138] [pool-1-thread-7] Initializing /data/converted/clown.ipw: [testng] [2024-06-24 02:51:07,154] [pool-1-thread-6] Initializing /data/samples/HEART.SEQ: [testng] [2024-06-24 02:51:07,189] [pool-1-thread-2] Initializing /data/converted/mitosis-test.ipw: [testng] [2024-06-24 02:51:07,233] [pool-1-thread-5] Initializing /data/converted/clown8c.tif: [testng] [2024-06-24 02:51:07,263] [pool-1-thread-12] Initializing /data/samples/TISSUE.TIF: [testng] [2024-06-24 02:51:07,354] [pool-1-thread-11] Initializing /data/converted/mitosis-test.seq: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 28 seconds Finished: SUCCESS