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Started by upstream project "BIOFORMATS-test-repo" build number 103 originally caused by: Started by upstream project "Trigger" build number 114 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins2064672012023969971.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_15893_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:21:04,379 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:04,382 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:21:04,382 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:04,383 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:04,384 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:04,385 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:04,385 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:04,385 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:04,386 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:04,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:04,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:04,388 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:04,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:04,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:04,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:04,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:04,678 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:04,679 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:04,679 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:04,679 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:04,680 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:21:04,681 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:21:04,681 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 295 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-25 01:21:04,698] [main] java.version = 11.0.16 [testng] 01:21:04,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:04,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:04,759 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-25_01-21-04.log] [testng] 01:21:04,761 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-06-25 01:21:04,763] [main] testng.directory = /data [testng] [2024-06-25 01:21:04,764] [main] testng.configDirectory = /config [testng] [2024-06-25 01:21:04,779] [main] testng.multiplier = 1.0 [testng] [2024-06-25 01:21:04,781] [main] testng.in-memory = false [testng] [2024-06-25 01:21:04,782] [main] testng.allow-missing = false [testng] [2024-06-25 01:21:04,782] [main] user.language = en [testng] [2024-06-25 01:21:04,782] [main] user.country = ${user.country} [testng] [2024-06-25 01:21:04,782] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-25 01:21:18,221] [main] ---------------------------------------- [testng] [2024-06-25 01:21:18,222] [main] Total files: 4424 [testng] [2024-06-25 01:21:18,222] [main] Scan time: 13.438 s (3 ms/file) [testng] [2024-06-25 01:21:18,223] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-25 01:23:26,965] [pool-1-thread-1] Initializing /data/bene/3d-example-stack.tif: [testng] 01:23:26,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:26,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:26,969 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-25_01-23-26.log] [testng] 01:23:26,970 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64704ed2 - End of configuration. [testng] [2024-06-25 01:23:27,029] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] 01:23:27,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:27,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-25_01-23-27.log] [testng] 01:23:27,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fb4b8f3 - End of configuration. [testng] [2024-06-25 01:23:27,063] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] 01:23:27,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:27,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,064 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-25_01-23-27.log] [testng] 01:23:27,065 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61a710d6 - End of configuration. [testng] [2024-06-25 01:23:27,091] [pool-1-thread-10] Initializing /data/josiah/cell-Z10.C1.tiff: [testng] 01:23:27,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:27,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-25_01-23-27.log] [testng] 01:23:27,093 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22b4a19f - End of configuration. [testng] [2024-06-25 01:23:27,124] [pool-1-thread-9] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] 01:23:27,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:27,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,125 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-25_01-23-27.log] [testng] 01:23:27,126 |-INFO in ch.qos.logback.core.sift.SiftProcessor@465fcead - End of configuration. [testng] [2024-06-25 01:23:27,158] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] 01:23:27,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:27,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,159 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-25_01-23-27.log] [testng] 01:23:27,159 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d880a0e - End of configuration. [testng] [2024-06-25 01:23:27,207] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] 01:23:27,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:27,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,208 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-25_01-23-27.log] [testng] 01:23:27,209 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5297dad9 - End of configuration. [testng] [2024-06-25 01:23:27,238] [pool-1-thread-6] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] 01:23:27,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:27,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,239 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-25_01-23-27.log] [testng] 01:23:27,239 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58d850cb - End of configuration. [testng] [2024-06-25 01:23:27,304] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] 01:23:27,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:27,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-25_01-23-27.log] [testng] 01:23:27,306 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fb86235 - End of configuration. [testng] [2024-06-25 01:23:27,385] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 01:23:27,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:27,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,386 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-25_01-23-27.log] [testng] 01:23:27,386 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6865b510 - End of configuration. [testng] [2024-06-25 01:23:27,425] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] 01:23:27,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:27,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,426 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-25_01-23-27.log] [testng] 01:23:27,426 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c50ba0 - End of configuration. [testng] [2024-06-25 01:23:27,472] [pool-1-thread-2] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] 01:23:27,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:27,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:27,474 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-25_01-23-27.log] [testng] 01:23:27,474 |-INFO in ch.qos.logback.core.sift.SiftProcessor@218016c0 - End of configuration. [testng] [2024-06-25 01:23:30,940] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z025.tif: [testng] [2024-06-25 01:23:30,961] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-06-25 01:23:30,983] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-06-25 01:23:31,064] [pool-1-thread-6] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-06-25 01:23:31,172] [pool-1-thread-7] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-06-25 01:23:31,239] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-06-25 01:23:31,405] [pool-1-thread-4] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-06-25 01:23:31,579] [pool-1-thread-9] Initializing /data/alexa/test4.tif: [testng] [2024-06-25 01:23:31,609] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z011.tif: [testng] [2024-06-25 01:23:31,634] [pool-1-thread-5] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] [2024-06-25 01:23:33,534] [pool-1-thread-8] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-06-25 01:23:34,006] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-06-25 01:23:34,039] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-06-25 01:23:34,065] [pool-1-thread-3] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-06-25 01:23:34,086] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-06-25 01:23:34,109] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z054.tif: [testng] [2024-06-25 01:23:34,474] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-06-25 01:23:34,534] [pool-1-thread-10] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-06-25 01:23:34,869] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-06-25 01:23:34,965] [pool-1-thread-12] Initializing /data/damian/21m.tiff: [testng] [2024-06-25 01:23:35,000] [pool-1-thread-6] Initializing /data/public/condensation/C4.pattern3.tif: [testng] [2024-06-25 01:23:35,094] [pool-1-thread-11] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-06-25 01:23:35,496] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z038.tif: [testng] [2024-06-25 01:23:35,533] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-06-25 01:23:35,592] [pool-1-thread-3] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-06-25 01:23:35,641] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-06-25 01:23:35,758] [pool-1-thread-10] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-06-25 01:23:36,090] [pool-1-thread-12] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-06-25 01:23:36,289] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z027.tif: [testng] [2024-06-25 01:23:36,386] [pool-1-thread-11] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-06-25 01:23:36,519] [pool-1-thread-4] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-06-25 01:23:36,608] [pool-1-thread-7] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-06-25 01:23:36,750] [pool-1-thread-9] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-06-25 01:23:36,802] [pool-1-thread-1] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-06-25 01:23:36,868] [pool-1-thread-10] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-06-25 01:23:37,412] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0258.TIF: [testng] [2024-06-25 01:23:37,513] [pool-1-thread-6] Initializing 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Initializing /data/lzw/test.tif: [testng] [2024-06-25 01:25:20,390] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-06-25 01:25:20,573] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-06-25 01:25:20,617] [pool-1-thread-11] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-06-25 01:25:20,729] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-06-25 01:25:20,755] [pool-1-thread-1] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-06-25 01:25:22,371] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-06-25 01:25:22,431] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-06-25 01:25:22,660] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-06-25 01:25:22,747] [pool-1-thread-3] Initializing 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Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-06-25 01:25:24,526] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] [2024-06-25 01:25:24,780] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-06-25 01:25:24,807] [pool-1-thread-11] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-06-25 01:25:24,955] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-06-25 01:25:25,028] [pool-1-thread-8] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-06-25 01:25:25,320] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-06-25 01:25:25,346] [pool-1-thread-5] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-06-25 01:25:25,572] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-06-25 01:25:25,745] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-06-25 01:25:25,857] [pool-1-thread-12] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-06-25 01:25:26,058] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z017.tif: [testng] [2024-06-25 01:25:26,121] [pool-1-thread-5] Initializing /data/misc/ms-paint.png: [testng] [2024-06-25 01:25:26,221] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-06-25 01:25:26,373] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z015.tif: [testng] [2024-06-25 01:25:26,438] [pool-1-thread-3] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-06-25 01:25:26,600] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-06-25 01:25:26,639] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] [2024-06-25 01:25:26,734] [pool-1-thread-7] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-06-25 01:25:26,825] [pool-1-thread-2] Initializing /data/damian/18m.tiff: [testng] [2024-06-25 01:25:26,974] [pool-1-thread-4] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-06-25 01:25:27,056] [pool-1-thread-12] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-06-25 01:25:27,113] [pool-1-thread-5] Initializing /data/big-images/2kx2k.tif: [testng] [2024-06-25 01:25:27,280] [pool-1-thread-2] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-06-25 01:25:27,540] [pool-1-thread-3] Initializing /data/jeff/test36b.tif: [testng] [2024-06-25 01:25:27,582] [pool-1-thread-12] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-06-25 01:25:27,732] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-06-25 01:25:27,840] [pool-1-thread-3] Initializing /data/stephane/P014.tif: [testng] [2024-06-25 01:25:28,048] [pool-1-thread-4] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-06-25 01:25:28,205] [pool-1-thread-2] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-06-25 01:25:28,244] [pool-1-thread-12] Initializing /data/curtis/test1.tiff: [testng] [2024-06-25 01:25:28,522] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-06-25 01:25:28,556] [pool-1-thread-3] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-06-25 01:25:28,749] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z005.tif: [testng] [2024-06-25 01:25:28,826] [pool-1-thread-2] Initializing /data/edward/TestDoc2.tif: [testng] [2024-06-25 01:25:29,013] [pool-1-thread-12] Initializing /data/public/condensation/C4.pattern8.tif: [testng] [2024-06-25 01:25:29,160] [pool-1-thread-4] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-06-25 01:25:29,529] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-06-25 01:25:29,555] [pool-1-thread-4] Initializing /data/martin/head.tif: [testng] [2024-06-25 01:25:29,615] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-06-25 01:25:29,662] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-06-25 01:25:29,738] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-06-25 01:25:30,187] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-06-25 01:25:30,213] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0233.TIF: [testng] [2024-06-25 01:25:30,271] [pool-1-thread-4] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-06-25 01:25:30,335] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-06-25 01:25:30,662] [pool-1-thread-3] Initializing /data/boguslaw/Arabidopsis_large.tif: [testng] [2024-06-25 01:25:30,790] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-06-25 01:25:30,876] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-06-25 01:25:30,988] [pool-1-thread-6] Initializing /data/ascb/FND-26_PaladeGlycogen_4800.tif: [testng] [2024-06-25 01:25:31,100] [pool-1-thread-5] Initializing /data/andrew/wibble-tmp4.tiff: [testng] [2024-06-25 01:25:31,137] [pool-1-thread-12] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-06-25 01:25:31,212] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-06-25 01:25:31,288] [pool-1-thread-8] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-06-25 01:25:31,414] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-06-25 01:25:31,552] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-06-25 01:25:31,695] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-06-25 01:25:31,765] [pool-1-thread-4] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-06-25 01:25:31,969] [pool-1-thread-8] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] [2024-06-25 01:25:32,156] [pool-1-thread-5] Initializing /data/josiah/cell-Z26.C1.tiff: [testng] [2024-06-25 01:25:32,379] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-06-25 01:25:32,602] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-06-25 01:25:32,622] [pool-1-thread-12] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] [2024-06-25 01:25:32,782] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-06-25 01:25:32,915] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-06-25 01:25:32,951] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-06-25 01:25:33,096] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-06-25 01:25:33,362] [pool-1-thread-5] Initializing /data/curtis/clown.tif: [testng] [2024-06-25 01:25:33,443] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-06-25 01:25:33,641] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-06-25 01:25:33,704] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-06-25 01:25:33,734] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-06-25 01:25:33,949] [pool-1-thread-5] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-06-25 01:25:34,114] [pool-1-thread-3] Initializing /data/misc/mri-stack.tif: [testng] [2024-06-25 01:25:34,169] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] [2024-06-25 01:25:34,415] [pool-1-thread-2] Initializing /data/john/C100915-MA_AXIS_LEH_IMAGE_KIND_FLAT_ICE_3.tif: [testng] [2024-06-25 01:25:34,594] [pool-1-thread-3] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-06-25 01:25:34,621] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z042.tif: [testng] [2024-06-25 01:25:34,902] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-06-25 01:25:35,017] [pool-1-thread-3] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] [2024-06-25 01:25:35,220] [pool-1-thread-5] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-06-25 01:25:35,595] [pool-1-thread-2] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-06-25 01:25:35,789] [pool-1-thread-5] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-06-25 01:25:36,667] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] [2024-06-25 01:25:36,818] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-06-25 01:25:37,004] [pool-1-thread-4] Initializing /data/josiah/cell-Z12.C0.tiff: [testng] [2024-06-25 01:25:37,037] [pool-1-thread-8] Initializing /data/curtis/images24.tiff: [testng] [2024-06-25 01:25:37,204] [pool-1-thread-6] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-06-25 01:25:37,382] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs000.TIF: [testng] [2024-06-25 01:25:37,486] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-06-25 01:25:37,544] [pool-1-thread-5] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-06-25 01:25:37,624] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-06-25 01:25:37,652] [pool-1-thread-6] Initializing /data/jay/Cleared%2fStack.tif: [testng] [2024-06-25 01:25:37,799] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-06-25 01:25:37,962] [pool-1-thread-2] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] [2024-06-25 01:25:38,004] [pool-1-thread-5] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-06-25 01:25:38,179] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 7 seconds Finished: SUCCESS