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Started by upstream project "BIOFORMATS-test-repo" build number 11 originally caused by: Started by upstream project "Trigger" build number 14 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins6703592245575774151.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_1613_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:19:59,657 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:19:59,659 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 00:19:59,659 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:19:59,660 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:19:59,661 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:19:59,661 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:19:59,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:19:59,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:19:59,662 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:19:59,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:19:59,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:19:59,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:19:59,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:19:59,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:19:59,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:19:59,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:19:59,937 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:19:59,937 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:19:59,937 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:19:59,938 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:19:59,938 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 00:19:59,939 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 00:19:59,939 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 277 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-25 00:19:59,949] [main] java.version = 1.8.0_342 [testng] 00:19:59,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:19:59,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:19:59,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-25_00-19-59.log] [testng] 00:20:00,000 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-03-25 00:20:00,002] [main] testng.directory = /data [testng] [2024-03-25 00:20:00,003] [main] testng.configDirectory = /config [testng] [2024-03-25 00:20:00,015] [main] testng.multiplier = 1.0 [testng] [2024-03-25 00:20:00,015] [main] testng.in-memory = false [testng] [2024-03-25 00:20:00,015] [main] testng.allow-missing = false [testng] [2024-03-25 00:20:00,015] [main] user.language = fr [testng] [2024-03-25 00:20:00,015] [main] user.country = FR [testng] [2024-03-25 00:20:00,015] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-03-25 00:20:01,166] [main] ---------------------------------------- [testng] [2024-03-25 00:20:01,167] [main] Total files: 103 [testng] [2024-03-25 00:20:01,167] [main] Scan time: 1.151 s (11 ms/file) [testng] [2024-03-25 00:20:01,167] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-25 00:20:14,254] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 00:20:14,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:20:14,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,256 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-25_00-20-14.log] [testng] 00:20:14,257 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e30768 - End of configuration. [testng] [2024-03-25 00:20:14,289] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] 00:20:14,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:20:14,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,290 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-25_00-20-14.log] [testng] 00:20:14,290 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a55d6f8 - End of configuration. [testng] [2024-03-25 00:20:14,305] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] 00:20:14,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:20:14,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-25_00-20-14.log] [testng] 00:20:14,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73049b44 - End of configuration. [testng] [2024-03-25 00:20:14,322] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] 00:20:14,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:20:14,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,323 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-25_00-20-14.log] [testng] 00:20:14,324 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68e7bc38 - End of configuration. [testng] [2024-03-25 00:20:14,410] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 00:20:14,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:20:14,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,411 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-25_00-20-14.log] [testng] 00:20:14,412 |-INFO in ch.qos.logback.core.sift.SiftProcessor@746995b9 - End of configuration. [testng] [2024-03-25 00:20:14,431] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] 00:20:14,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:20:14,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,431 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-25_00-20-14.log] [testng] 00:20:14,432 |-INFO in ch.qos.logback.core.sift.SiftProcessor@288ff06f - End of configuration. [testng] [2024-03-25 00:20:14,518] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] 00:20:14,519 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:20:14,519 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,519 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-25_00-20-14.log] [testng] 00:20:14,520 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22263f84 - End of configuration. [testng] [2024-03-25 00:20:14,537] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] 00:20:14,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:20:14,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,538 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-25_00-20-14.log] [testng] 00:20:14,538 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45d7a69f - End of configuration. [testng] [2024-03-25 00:20:14,626] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3: [testng] 00:20:14,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:20:14,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,627 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-25_00-20-14.log] [testng] 00:20:14,628 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e089c2a - End of configuration. [testng] [2024-03-25 00:20:14,647] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3: [testng] 00:20:14,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:20:14,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-25_00-20-14.log] [testng] 00:20:14,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77ee426c - End of configuration. [testng] [2024-03-25 00:20:14,675] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] 00:20:14,675 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:20:14,675 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,676 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-25_00-20-14.log] [testng] 00:20:14,676 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c9002dd - End of configuration. [testng] [2024-03-25 00:20:14,701] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3: [testng] 00:20:14,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:20:14,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:14,702 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-25_00-20-14.log] [testng] 00:20:14,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3931b4ed - End of configuration. [testng] [2024-03-25 00:20:17,065] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-03-25 00:20:17,081] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-03-25 00:20:17,247] [pool-1-thread-6] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-03-25 00:20:17,881] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-03-25 00:20:18,111] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-03-25 00:20:18,723] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-03-25 00:20:18,741] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-03-25 00:20:20,048] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-03-25 00:20:20,339] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-03-25 00:20:21,459] [pool-1-thread-4] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-03-25 00:20:21,503] [pool-1-thread-8] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-03-25 00:20:21,667] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-03-25 00:20:21,715] [pool-1-thread-2] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-03-25 00:20:21,760] [pool-1-thread-3] Initializing /data/ofra/lowloss.dm3: [testng] [2024-03-25 00:20:22,372] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-03-25 00:20:22,578] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-03-25 00:20:22,627] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-03-25 00:20:22,825] [pool-1-thread-9] Initializing /data/jay/DMtest2.dm3: [testng] [2024-03-25 00:20:23,231] [pool-1-thread-6] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-03-25 00:20:24,089] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-03-25 00:20:24,197] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-03-25 00:20:24,433] [pool-1-thread-3] Initializing /data/qa-7642/8.dm4: [testng] [2024-03-25 00:20:24,876] [pool-1-thread-12] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-03-25 00:20:25,041] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-03-25 00:20:26,490] [pool-1-thread-3] Initializing /data/melissa/annotation-test.tif: [testng] [2024-03-25 00:20:26,900] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-03-25 00:20:27,086] [pool-1-thread-8] Initializing /data/qa-21761/example.dm4: [testng] [2024-03-25 00:20:27,604] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-03-25 00:20:27,774] [pool-1-thread-2] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-03-25 00:20:27,937] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-03-25 00:20:28,641] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-03-25 00:20:28,802] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-03-25 00:20:29,071] [pool-1-thread-8] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-03-25 00:20:29,587] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-03-25 00:20:29,676] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-03-25 00:20:31,516] [pool-1-thread-7] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-03-25 00:20:33,118] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-03-25 00:20:33,263] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-03-25 00:20:33,312] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-03-25 00:20:33,427] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-03-25 00:20:34,158] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-03-25 00:20:34,227] [pool-1-thread-12] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-03-25 00:20:35,268] [pool-1-thread-3] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-03-25 00:20:35,327] [pool-1-thread-7] Initializing /data/jay/smallerfile.dm3: [testng] [2024-03-25 00:20:36,075] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-03-25 00:20:36,736] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-03-25 00:20:36,896] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-03-25 00:20:37,716] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-03-25 00:20:38,728] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-03-25 00:20:39,503] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-03-25 00:20:40,343] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-03-25 00:20:40,670] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-03-25 00:20:41,451] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-03-25 00:20:41,513] [pool-1-thread-6] Initializing /data/samples/test-tiles.dm3: [testng] [2024-03-25 00:20:41,626] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-03-25 00:20:42,368] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-03-25 00:20:42,453] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-03-25 00:20:43,053] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-03-25 00:20:43,495] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-03-25 00:20:43,583] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-03-25 00:20:44,610] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-03-25 00:20:45,466] [pool-1-thread-12] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-03-25 00:20:46,315] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-03-25 00:20:47,577] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-03-25 00:20:47,759] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-03-25 00:20:48,177] [pool-1-thread-11] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-03-25 00:20:48,763] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-03-25 00:20:49,108] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-03-25 00:20:49,190] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-03-25 00:20:50,089] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-03-25 00:20:51,048] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-03-25 00:20:51,584] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-03-25 00:20:52,046] [pool-1-thread-9] Initializing /data/jay/DMtest.dm3: [testng] [2024-03-25 00:20:52,461] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-03-25 00:20:52,535] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-03-25 00:20:53,423] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-03-25 00:20:53,521] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-03-25 00:20:53,733] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-03-25 00:20:53,977] [pool-1-thread-7] Initializing /data/jay/dnasample.tif: [testng] [2024-03-25 00:20:54,667] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-03-25 00:20:55,729] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-03-25 00:20:55,804] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-03-25 00:20:56,967] [pool-1-thread-12] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-03-25 00:20:57,443] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-03-25 00:20:57,989] [pool-1-thread-11] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-03-25 00:20:58,062] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 17 seconds Finished: SUCCESS