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Started by upstream project "BIOFORMATS-test-repo" build number 104
originally caused by:
 Started by upstream project "Trigger" build number 116
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins5744440201641415477.sh
+ '[' nikon-jp2 = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_16191_merge_ci -v /uod/idr/repos/curated/nikon-jp2:/data -v /uod/idr-scratch/merge-ci/curated/nikon-jp2:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] 4 warnings

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 02:37:06,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:37:06,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:37:06,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:37:06,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:37:06,916 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:37:06,916 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:37:06,916 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:37:06,917 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:37:06,917 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@428640fa - End of configuration.
   [testng] 02:37:06,918 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6bd61f98 - Registering current configuration as safe fallback point
   [testng] 02:37:06,918 |-INFO in ch.qos.logback.classic.util.ContextInitializer@48aca48b - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 530 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-27 02:37:06,927] [main] java.version = 21
   [testng] 02:37:06,931 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:37:06,931 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:07,200 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-27_02-37-07.log]
   [testng] 02:37:07,201 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
   [testng] [2024-06-27 02:37:07,203] [main] testng.directory = /data
   [testng] [2024-06-27 02:37:07,203] [main] testng.configDirectory = /config
   [testng] [2024-06-27 02:37:07,292] [main] testng.multiplier = 1.0
   [testng] [2024-06-27 02:37:07,292] [main] testng.in-memory = false
   [testng] [2024-06-27 02:37:07,292] [main] testng.allow-missing = false
   [testng] [2024-06-27 02:37:07,293] [main] user.language = en
   [testng] [2024-06-27 02:37:07,293] [main] user.country = ${user.country}
   [testng] [2024-06-27 02:37:07,293] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-27 02:37:08,443] [main] ----------------------------------------
   [testng] [2024-06-27 02:37:08,443] [main] Total files: 11
   [testng] [2024-06-27 02:37:08,443] [main] Scan time: 1.15 s (104 ms/file)
   [testng] [2024-06-27 02:37:08,444] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 11 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-27 02:37:10,461] [pool-1-thread-1] Initializing /data/kira/DapiFitcTexRed005.bmp: 
   [testng] 02:37:10,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:37:10,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:10,463 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-27_02-37-10.log]
   [testng] 02:37:10,463 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e3a1901 - End of configuration.
   [testng] [2024-06-27 02:37:10,480] [pool-1-thread-11] Initializing /data/kira/DapiFitcTexRed008B.tif: 
   [testng] 02:37:10,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:37:10,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:10,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-27_02-37-10.log]
   [testng] 02:37:10,483 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ff6aef3 - End of configuration.
   [testng] [2024-06-27 02:37:10,555] [pool-1-thread-10] Initializing /data/kira/DapiFitcTexRed008BGR.tif: 
   [testng] 02:37:10,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:37:10,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:10,557 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-27_02-37-10.log]
   [testng] 02:37:10,558 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5507d9cc - End of configuration.
   [testng] [2024-06-27 02:37:10,681] [pool-1-thread-9] Initializing /data/kira/DapiFitcTexRed007.gif: 
   [testng] 02:37:10,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:37:10,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:10,683 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-27_02-37-10.log]
   [testng] 02:37:10,684 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7643e1a2 - End of configuration.
   [testng] [2024-06-27 02:37:10,713] [pool-1-thread-8] Initializing /data/kira/DapiFitcTexRed008.jp2: 
   [testng] 02:37:10,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:37:10,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:10,715 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-27_02-37-10.log]
   [testng] 02:37:10,715 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c1ff958 - End of configuration.
   [testng] [2024-06-27 02:37:10,865] [pool-1-thread-7] Initializing /data/kira/DapiFitcTexRed003.jpg: 
   [testng] 02:37:10,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:37:10,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:10,867 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-27_02-37-10.log]
   [testng] 02:37:10,867 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a0a49fa - End of configuration.
   [testng] [2024-06-27 02:37:10,955] [pool-1-thread-6] Initializing /data/kira/DapiFitcTexRed008R.tif: 
   [testng] 02:37:10,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:37:10,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:10,957 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-27_02-37-10.log]
   [testng] 02:37:10,957 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18f8579 - End of configuration.
   [testng] [2024-06-27 02:37:11,074] [pool-1-thread-5] Initializing /data/kira/DapiFitcTexRed008G.tif: 
   [testng] 02:37:11,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:37:11,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:11,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-27_02-37-11.log]
   [testng] 02:37:11,075 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a0512b4 - End of configuration.
   [testng] [2024-06-27 02:37:11,173] [pool-1-thread-4] Initializing /data/kira/DapiFitcTexRed006.png: 
   [testng] 02:37:11,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:37:11,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:11,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-27_02-37-11.log]
   [testng] 02:37:11,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e0fbd05 - End of configuration.
   [testng] [2024-06-27 02:37:11,187] [pool-1-thread-3] Initializing /data/kira/DapiFitcTexRed004.tif: 
   [testng] 02:37:11,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:37:11,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:11,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-27_02-37-11.log]
   [testng] 02:37:11,189 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e6f929b - End of configuration.
   [testng] [2024-06-27 02:37:11,287] [pool-1-thread-2] Initializing /data/kira/DapiFitcTexRed001.jp2: 
   [testng] 02:37:11,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:37:11,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:11,288 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-27_02-37-11.log]
   [testng] 02:37:11,288 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55e8dae0 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 583, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 24 seconds
Finished: SUCCESS