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Started by upstream project "BIOFORMATS-test-repo" build number 105 originally caused by: Started by upstream project "Trigger" build number 117 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins4574944397674444625.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_16212_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:27:32,810 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:27:32,811 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:27:32,811 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:27:32,812 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:27:32,812 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:27:32,813 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:27:32,813 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:27:32,813 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:27:32,813 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:27:32,814 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:27:32,814 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:27:32,814 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:27:33,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:27:33,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:27:33,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:27:33,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:27:33,061 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:27:33,061 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:27:33,061 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:27:33,062 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:27:33,062 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:27:33,063 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:27:33,063 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 250 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-28 01:27:33,072] [main] java.version = 1.8.0_342 [testng] 01:27:33,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:27:33,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:33,118 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-28_01-27-33.log] [testng] 01:27:33,120 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-06-28 01:27:33,122] [main] testng.directory = /data [testng] [2024-06-28 01:27:33,122] [main] testng.configDirectory = /config [testng] [2024-06-28 01:27:33,134] [main] testng.multiplier = 1.0 [testng] [2024-06-28 01:27:33,134] [main] testng.in-memory = false [testng] [2024-06-28 01:27:33,134] [main] testng.allow-missing = false [testng] [2024-06-28 01:27:33,134] [main] user.language = en [testng] [2024-06-28 01:27:33,134] [main] user.country = ${user.country} [testng] [2024-06-28 01:27:33,134] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-06-28 01:27:34,036] [main] ---------------------------------------- [testng] [2024-06-28 01:27:34,036] [main] Total files: 103 [testng] [2024-06-28 01:27:34,036] [main] Scan time: 0.902 s (8 ms/file) [testng] [2024-06-28 01:27:34,036] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-28 01:27:42,614] [pool-1-thread-1] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] 01:27:42,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:27:42,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:42,616 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-28_01-27-42.log] [testng] 01:27:42,617 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e025d2 - End of configuration. [testng] [2024-06-28 01:27:42,646] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] 01:27:42,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:27:42,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:42,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-28_01-27-42.log] [testng] 01:27:42,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c2850aa - End of configuration. [testng] [2024-06-28 01:27:42,674] [pool-1-thread-11] Initializing /data/jay/ViewDMtest.dm3: [testng] 01:27:42,675 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:27:42,675 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:42,675 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-28_01-27-42.log] [testng] 01:27:42,676 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50b207d2 - End of configuration. [testng] [2024-06-28 01:27:42,687] [pool-1-thread-10] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 01:27:42,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:27:42,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:42,688 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-28_01-27-42.log] [testng] 01:27:42,689 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35671604 - End of configuration. [testng] [2024-06-28 01:27:42,716] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 01:27:42,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:27:42,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:42,717 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-28_01-27-42.log] [testng] 01:27:42,736 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57ff6112 - End of configuration. [testng] [2024-06-28 01:27:42,778] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] 01:27:42,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:27:42,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:42,779 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-28_01-27-42.log] [testng] 01:27:42,779 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25c1f016 - End of configuration. [testng] [2024-06-28 01:27:42,790] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] 01:27:42,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:27:42,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:42,791 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-28_01-27-42.log] [testng] 01:27:42,791 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fcafbc6 - End of configuration. [testng] [2024-06-28 01:27:42,950] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] 01:27:42,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:27:42,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:42,951 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-28_01-27-42.log] [testng] 01:27:42,952 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d6559d9 - End of configuration. [testng] [2024-06-28 01:27:42,965] [pool-1-thread-5] Initializing /data/jay/recAmaghi.dm3: [testng] 01:27:42,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:27:42,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:42,967 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-28_01-27-42.log] [testng] 01:27:42,967 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c376175 - End of configuration. [testng] [2024-06-28 01:27:43,008] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] 01:27:43,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:27:43,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:43,009 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-28_01-27-43.log] [testng] 01:27:43,009 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a1ab9a5 - End of configuration. [testng] [2024-06-28 01:27:43,062] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e5.tif: [testng] 01:27:43,062 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:27:43,062 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:43,063 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-28_01-27-43.log] [testng] 01:27:43,064 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77ebe100 - End of configuration. [testng] [2024-06-28 01:27:43,219] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] 01:27:43,219 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:27:43,219 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:43,220 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-28_01-27-43.log] [testng] 01:27:43,220 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2699485a - End of configuration. [testng] [2024-06-28 01:27:46,667] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-06-28 01:27:46,740] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-06-28 01:27:47,235] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-06-28 01:27:47,498] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-06-28 01:27:48,174] [pool-1-thread-8] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-06-28 01:27:48,320] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-06-28 01:27:49,177] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-06-28 01:27:49,618] [pool-1-thread-5] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-06-28 01:27:49,907] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-06-28 01:27:49,974] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-06-28 01:27:50,065] [pool-1-thread-6] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-06-28 01:27:50,396] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-06-28 01:27:51,095] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-06-28 01:27:51,102] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-06-28 01:27:53,862] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-06-28 01:27:55,227] [pool-1-thread-8] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-06-28 01:27:55,402] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-06-28 01:27:56,208] [pool-1-thread-5] Initializing /data/qa-7642/8.dm4: [testng] [2024-06-28 01:27:57,517] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-06-28 01:27:57,546] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-06-28 01:27:57,839] [pool-1-thread-11] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-06-28 01:27:57,879] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-06-28 01:27:58,206] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-06-28 01:27:58,592] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-06-28 01:28:00,035] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-06-28 01:28:01,659] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-06-28 01:28:01,997] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-06-28 01:28:02,728] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-06-28 01:28:03,637] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-06-28 01:28:04,692] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-06-28 01:28:04,957] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-06-28 01:28:05,165] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-06-28 01:28:06,272] [pool-1-thread-6] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-06-28 01:28:06,344] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-06-28 01:28:06,413] [pool-1-thread-3] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-06-28 01:28:07,311] [pool-1-thread-10] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-06-28 01:28:07,380] [pool-1-thread-8] Initializing /data/samples/test-tiles.dm3: [testng] [2024-06-28 01:28:08,549] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-06-28 01:28:09,800] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-06-28 01:28:11,829] [pool-1-thread-2] Initializing /data/jay/dnasample1.dm3: [testng] [2024-06-28 01:28:12,286] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-06-28 01:28:12,297] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-06-28 01:28:14,461] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-06-28 01:28:14,760] [pool-1-thread-3] Initializing /data/jay/dnasample.tif: [testng] [2024-06-28 01:28:15,858] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-06-28 01:28:16,617] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-06-28 01:28:16,974] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-06-28 01:28:18,011] [pool-1-thread-7] Initializing /data/qa-21761/example.dm4: [testng] [2024-06-28 01:28:18,462] [pool-1-thread-9] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-06-28 01:28:18,549] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-06-28 01:28:19,555] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-06-28 01:28:19,971] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-06-28 01:28:20,102] [pool-1-thread-12] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-06-28 01:28:20,113] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-06-28 01:28:20,260] [pool-1-thread-9] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-06-28 01:28:21,585] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-06-28 01:28:21,947] [pool-1-thread-12] Initializing /data/jay/DMtest.dm3: [testng] [2024-06-28 01:28:22,530] [pool-1-thread-7] Initializing /data/jay/DMtest2.dm3: [testng] [2024-06-28 01:28:22,559] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-06-28 01:28:22,679] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-06-28 01:28:23,042] [pool-1-thread-6] Initializing /data/jay/camtest1.dm3: [testng] [2024-06-28 01:28:23,123] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-06-28 01:28:24,482] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-06-28 01:28:25,138] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-06-28 01:28:25,234] [pool-1-thread-9] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-06-28 01:28:25,288] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-06-28 01:28:25,479] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-06-28 01:28:25,606] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-06-28 01:28:25,699] [pool-1-thread-9] Initializing /data/ofra/lowloss.dm3: [testng] [2024-06-28 01:28:25,846] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-06-28 01:28:25,998] [pool-1-thread-2] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-06-28 01:28:26,253] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-06-28 01:28:26,334] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-06-28 01:28:26,434] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-06-28 01:28:27,385] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-06-28 01:28:27,661] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-06-28 01:28:28,235] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-06-28 01:28:28,277] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-06-28 01:28:28,721] [pool-1-thread-11] Initializing /data/melissa/annotation-test.tif: [testng] [2024-06-28 01:28:28,788] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-06-28 01:28:29,006] [pool-1-thread-11] Initializing /data/jay/smallerfile.dm3: [testng] [2024-06-28 01:28:29,029] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-06-28 01:28:29,082] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-06-28 01:28:29,711] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-06-28 01:28:29,922] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-06-28 01:28:29,979] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 18 seconds Finished: SUCCESS