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Started by upstream project "BIOFORMATS-test-repo" build number 105 originally caused by: Started by upstream project "Trigger" build number 117 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins1131751667034197088.sh + '[' fei = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_16237_merge_ci -v /uod/idr/repos/curated/fei:/data -v /uod/idr-scratch/merge-ci/curated/fei:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:31:50,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:31:50,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:31:50,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:31:50,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:31:50,428 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:31:50,428 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:31:50,429 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:31:50,429 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:31:50,429 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:31:50,441 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:31:50,442 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 446 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-28 01:31:50,455] [main] java.version = 1.8.0_342 [testng] 01:31:50,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:31:50,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:50,517 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-28_01-31-50.log] [testng] 01:31:50,519 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-06-28 01:31:50,522] [main] testng.directory = /data [testng] [2024-06-28 01:31:50,522] [main] testng.configDirectory = /config [testng] [2024-06-28 01:31:50,536] [main] testng.multiplier = 1.0 [testng] [2024-06-28 01:31:50,536] [main] testng.in-memory = false [testng] [2024-06-28 01:31:50,536] [main] testng.allow-missing = false [testng] [2024-06-28 01:31:50,536] [main] user.language = en [testng] [2024-06-28 01:31:50,536] [main] user.country = ${user.country} [testng] [2024-06-28 01:31:50,537] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-06-28 01:31:52,081] [main] ---------------------------------------- [testng] [2024-06-28 01:31:52,081] [main] Total files: 21 [testng] [2024-06-28 01:31:52,081] [main] Scan time: 1.544 s (73 ms/file) [testng] [2024-06-28 01:31:52,081] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-28 01:31:54,308] [pool-1-thread-1] Initializing /data/peter/ZC_PTCS_ED_1000x_002.tif: [testng] 01:31:54,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:31:54,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,310 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-28_01-31-54.log] [testng] 01:31:54,310 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29809ccb - End of configuration. [testng] [2024-06-28 01:31:54,352] [pool-1-thread-12] Initializing /data/venu/VENU_Six.TIF: [testng] 01:31:54,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:31:54,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,353 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-28_01-31-54.log] [testng] 01:31:54,353 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11730a9e - End of configuration. [testng] [2024-06-28 01:31:54,409] [pool-1-thread-11] Initializing /data/antoine/Tile_001-002-000_0-000.tif: [testng] 01:31:54,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:31:54,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,411 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-28_01-31-54.log] [testng] 01:31:54,411 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cca1731 - End of configuration. [testng] [2024-06-28 01:31:54,477] [pool-1-thread-10] Initializing /data/venu/VENU_Seven.TIF: [testng] 01:31:54,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:31:54,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,479 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-28_01-31-54.log] [testng] 01:31:54,479 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5863004 - End of configuration. [testng] [2024-06-28 01:31:54,516] [pool-1-thread-9] Initializing /data/qa-11061/Tile_020-009-000_0.tif: [testng] 01:31:54,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:31:54,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,517 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-28_01-31-54.log] [testng] 01:31:54,518 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f884f71 - End of configuration. [testng] [2024-06-28 01:31:54,609] [pool-1-thread-8] Initializing /data/venu/VENU03.TIF: [testng] 01:31:54,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:31:54,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,611 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-28_01-31-54.log] [testng] 01:31:54,611 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c93b1ff - End of configuration. [testng] [2024-06-28 01:31:54,708] [pool-1-thread-7] Initializing /data/qa-4264/08.51.17 CCD Acquire-Acquire CCD Image Display-Acquire CCD -0.tif: [testng] 01:31:54,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:31:54,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,710 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-28_01-31-54.log] [testng] 01:31:54,710 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47bc9fe5 - End of configuration. [testng] [2024-06-28 01:31:54,804] [pool-1-thread-6] Initializing /data/venu/VENU01.TIF: [testng] 01:31:54,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:31:54,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,805 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-28_01-31-54.log] [testng] 01:31:54,806 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c238061 - End of configuration. [testng] [2024-06-28 01:31:54,842] [pool-1-thread-5] Initializing /data/venu/VENU03.IMG: [testng] 01:31:54,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:31:54,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-28_01-31-54.log] [testng] 01:31:54,843 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d2c5ea - End of configuration. [testng] [2024-06-28 01:31:54,876] [pool-1-thread-4] Initializing /data/venu/VENU.TIF: [testng] 01:31:54,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:31:54,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-28_01-31-54.log] [testng] 01:31:54,878 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b19dbfc - End of configuration. [testng] [2024-06-28 01:31:54,916] [pool-1-thread-3] Initializing /data/qa-10514/TITAN_FEI_TIFF_Test_Image.tif: [testng] 01:31:54,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:31:54,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-28_01-31-54.log] [testng] 01:31:54,918 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10410cf6 - End of configuration. [testng] [2024-06-28 01:31:54,948] [pool-1-thread-2] Initializing /data/venu/VENU_Four.TIF: [testng] 01:31:54,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:31:54,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:54,949 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-28_01-31-54.log] [testng] 01:31:54,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3337ffcd - End of configuration. [testng] [2024-06-28 01:31:57,238] [pool-1-thread-3] Initializing /data/steffen/Batman_008.tif: [testng] [2024-06-28 01:31:57,267] [pool-1-thread-12] Initializing /data/venu/VENU02.IMG: [testng] [2024-06-28 01:31:57,282] [pool-1-thread-5] Initializing /data/venu/VENU_Eight.TIF: [testng] [2024-06-28 01:31:57,306] [pool-1-thread-1] Initializing /data/venu/VENU02.TIF: [testng] [2024-06-28 01:31:57,343] [pool-1-thread-6] Initializing /data/venu/VENU_Five.TIF: [testng] [2024-06-28 01:31:57,367] [pool-1-thread-8] Initializing /data/venu/VENU01.IMG: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 14 seconds Finished: SUCCESS