Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 106
originally caused by:
 Started by upstream project "Trigger" build number 118
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9837544808867466150.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_16415_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:29:06,753 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:29:06,755 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 01:29:06,755 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:29:06,756 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:29:06,757 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:29:06,757 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:29:06,758 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:29:06,758 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:29:06,758 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:29:06,760 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:29:06,760 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:29:06,761 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:29:06,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:29:06,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:29:07,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:29:07,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:29:07,009 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:29:07,009 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:29:07,009 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:29:07,010 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:29:07,010 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 01:29:07,011 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 01:29:07,011 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 253 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-29 01:29:07,021] [main] java.version = 11.0.16
   [testng] 01:29:07,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:29:07,026 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:07,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-29_01-29-07.log]
   [testng] 01:29:07,077 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-06-29 01:29:07,079] [main] testng.directory = /data
   [testng] [2024-06-29 01:29:07,079] [main] testng.configDirectory = /config
   [testng] [2024-06-29 01:29:07,090] [main] testng.multiplier = 1.0
   [testng] [2024-06-29 01:29:07,092] [main] testng.in-memory = false
   [testng] [2024-06-29 01:29:07,092] [main] testng.allow-missing = false
   [testng] [2024-06-29 01:29:07,092] [main] user.language = en
   [testng] [2024-06-29 01:29:07,092] [main] user.country = ${user.country}
   [testng] [2024-06-29 01:29:07,092] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-29 01:29:10,311] [main] ----------------------------------------
   [testng] [2024-06-29 01:29:10,311] [main] Total files: 259
   [testng] [2024-06-29 01:29:10,311] [main] Scan time: 3.219 s (12 ms/file)
   [testng] [2024-06-29 01:29:10,312] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 144 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-29 01:35:39,818] [pool-1-thread-1] Initializing /data/brian/PA-GFPv-2.oib: 
   [testng] 01:35:39,819 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:35:39,819 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:39,821 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-29_01-35-39.log]
   [testng] 01:35:39,822 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ebd254a - End of configuration.
   [testng] [2024-06-29 01:35:40,085] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: 
   [testng] 01:35:40,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:35:40,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:40,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-29_01-35-40.log]
   [testng] 01:35:40,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b3d1c4a - End of configuration.
   [testng] [2024-06-29 01:35:40,160] [pool-1-thread-11] Initializing /data/molly/11OCT8.OIF: 
   [testng] 01:35:40,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:35:40,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:40,161 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-29_01-35-40.log]
   [testng] 01:35:40,162 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3392e39d - End of configuration.
   [testng] [2024-06-29 01:35:40,478] [pool-1-thread-10] Initializing /data/michael/CELL3.oib: 
   [testng] 01:35:40,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:35:40,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:40,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-29_01-35-40.log]
   [testng] 01:35:40,481 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56b1cd69 - End of configuration.
   [testng] [2024-06-29 01:35:40,536] [pool-1-thread-9] Initializing /data/molly/11OCT2.OIF: 
   [testng] 01:35:40,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:35:40,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:40,537 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-29_01-35-40.log]
   [testng] 01:35:40,537 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ea5cf40 - End of configuration.
   [testng] [2024-06-29 01:35:41,059] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib: 
   [testng] 01:35:41,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:35:41,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:41,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-29_01-35-41.log]
   [testng] 01:35:41,060 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e70712f - End of configuration.
   [testng] [2024-06-29 01:35:41,155] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: 
   [testng] 01:35:41,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:35:41,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:41,156 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-29_01-35-41.log]
   [testng] 01:35:41,156 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79e7f209 - End of configuration.
   [testng] [2024-06-29 01:35:41,290] [pool-1-thread-6] Initializing /data/pedro/plv-test.oib: 
   [testng] 01:35:41,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:35:41,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:41,291 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-29_01-35-41.log]
   [testng] 01:35:41,292 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53d0d6b4 - End of configuration.
   [testng] [2024-06-29 01:35:41,353] [pool-1-thread-5] Initializing /data/sten/01.oib: 
   [testng] 01:35:41,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:35:41,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:41,354 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-29_01-35-41.log]
   [testng] 01:35:41,354 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a84b9f4 - End of configuration.
   [testng] [2024-06-29 01:35:41,425] [pool-1-thread-4] Initializing /data/glen/notsaturated.oib: 
   [testng] 01:35:41,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:35:41,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:41,427 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-29_01-35-41.log]
   [testng] 01:35:41,427 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7762e4d4 - End of configuration.
   [testng] [2024-06-29 01:35:41,661] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: 
   [testng] 01:35:41,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:35:41,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:41,663 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-29_01-35-41.log]
   [testng] 01:35:41,663 |-INFO in ch.qos.logback.core.sift.SiftProcessor@324bc5cb - End of configuration.
   [testng] [2024-06-29 01:35:41,968] [pool-1-thread-2] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: 
   [testng] 01:35:41,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:35:41,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:35:41,969 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-29_01-35-41.log]
   [testng] 01:35:41,970 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f42e05b - End of configuration.
   [testng] [2024-06-29 01:35:47,598] [pool-1-thread-12] Initializing /data/aryeh/1h.oib: 
   [testng] [2024-06-29 01:35:48,043] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: 
   [testng] [2024-06-29 01:35:48,311] [pool-1-thread-6] Initializing /data/qa-17748/Image0079.oib: 
   [testng] [2024-06-29 01:35:48,349] [pool-1-thread-8] Initializing /data/jean-claude/villositerat0heurea.oib: 
   [testng] [2024-06-29 01:35:48,377] [pool-1-thread-5] Initializing /data/johannes/step4.bmp: 
   [testng] [2024-06-29 01:35:48,645] [pool-1-thread-4] Initializing /data/david/Image0016.oib: 
   [testng] [2024-06-29 01:35:48,753] [pool-1-thread-1] Initializing /data/glen/singlesimul.oif: 
   [testng] [2024-06-29 01:35:48,954] [pool-1-thread-8] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: 
   [testng] [2024-06-29 01:35:49,203] [pool-1-thread-3] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: 
   [testng] [2024-06-29 01:35:49,321] [pool-1-thread-6] Initializing /data/david/Image0016.oif: 
   [testng] [2024-06-29 01:35:49,733] [pool-1-thread-4] Initializing /data/brian/MitoRed-POPO3.oib: 
   [testng] [2024-06-29 01:35:50,151] [pool-1-thread-5] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: 
   [testng] [2024-06-29 01:35:50,644] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: 
   [testng] [2024-06-29 01:35:50,850] [pool-1-thread-10] Initializing /data/stefan/cytosol_01a.oif: 
   [testng] [2024-06-29 01:35:52,343] [pool-1-thread-1] Initializing /data/simon/never_worked.oib: 
   [testng] [2024-06-29 01:35:52,511] [pool-1-thread-3] Initializing /data/glen/Image0002.oif: 
   [testng] [2024-06-29 01:35:52,850] [pool-1-thread-6] Initializing /data/tom/zseries-test.oib: 
   [testng] [2024-06-29 01:35:53,355] [pool-1-thread-4] Initializing /data/dan/outerEV1solu6new.oib: 
   [testng] [2024-06-29 01:35:53,994] [pool-1-thread-8] Initializing /data/molly/11OCT11.OIF: 
   [testng] [2024-06-29 01:35:54,385] [pool-1-thread-1] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: 
   [testng] [2024-06-29 01:35:54,457] [pool-1-thread-12] Initializing /data/monica/Image0056.oif: 
   [testng] [2024-06-29 01:35:55,065] [pool-1-thread-5] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: 
   [testng] [2024-06-29 01:35:55,288] [pool-1-thread-4] Initializing /data/simon/used_to_work.oib: 
   [testng] [2024-06-29 01:35:56,036] [pool-1-thread-5] Initializing /data/yasunori/series_1.oib: 
   [testng] [2024-06-29 01:35:56,784] [pool-1-thread-12] Initializing /data/karl/Image0009.oib: 
   [testng] [2024-06-29 01:35:56,847] [pool-1-thread-6] Initializing /data/stefan/YC2_spectrum-405.oib: 
   [testng] [2024-06-29 01:35:57,379] [pool-1-thread-4] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: 
   [testng] [2024-06-29 01:35:57,670] [pool-1-thread-12] Initializing /data/satoshi/60x_5x_1.oif: 
   [testng] [2024-06-29 01:35:57,776] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: 
   [testng] [2024-06-29 01:35:58,287] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3.oib: 
   [testng] [2024-06-29 01:35:59,040] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: 
   [testng] [2024-06-29 01:35:59,564] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: 
   [testng] [2024-06-29 01:35:59,845] [pool-1-thread-5] Initializing /data/qa-17748/Image0098.oib: 
   [testng] [2024-06-29 01:36:00,679] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: 
   [testng] [2024-06-29 01:36:01,283] [pool-1-thread-4] Initializing /data/brian/Caged Glu-3 point.oib: 
   [testng] [2024-06-29 01:36:01,792] [pool-1-thread-6] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: 
   [testng] [2024-06-29 01:36:01,978] [pool-1-thread-6] Initializing /data/aryeh/1h_after_pdt.oib: 
   [testng] [2024-06-29 01:36:04,388] [pool-1-thread-5] Initializing /data/johannes/step3.bmp: 
   [testng] [2024-06-29 01:36:04,900] [pool-1-thread-4] Initializing /data/stefan/yc2_live-03.oib: 
   [testng] [2024-06-29 01:36:05,812] [pool-1-thread-12] Initializing /data/glen/111407.oif: 
   [testng] [2024-06-29 01:36:05,963] [pool-1-thread-5] Initializing /data/johannes/step1.bmp: 
   [testng] [2024-06-29 01:36:06,932] [pool-1-thread-5] Initializing /data/johannes/step4b.bmp: 
   [testng] [2024-06-29 01:36:07,916] [pool-1-thread-5] Initializing /data/molly/13SH2bUTRtime4b.oib: 
   [testng] [2024-06-29 01:36:08,836] [pool-1-thread-1] Initializing /data/tom/RGB-1.avi: 
   [testng] [2024-06-29 01:36:09,430] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG7.oib: 
   [testng] [2024-06-29 01:36:09,918] [pool-1-thread-1] Initializing /data/glen/4205basal106072.oif: 
   [testng] [2024-06-29 01:36:10,132] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: 
   [testng] [2024-06-29 01:36:10,734] [pool-1-thread-4] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: 
   [testng] [2024-06-29 01:36:11,451] [pool-1-thread-2] Initializing /data/allan/62909#1.oib: 
   [testng] [2024-06-29 01:36:11,713] [pool-1-thread-5] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: 
   [testng] [2024-06-29 01:36:11,908] [pool-1-thread-2] Initializing /data/brian/Rhodamine-PI-1.oib: 
   [testng] [2024-06-29 01:36:12,973] [pool-1-thread-2] Initializing /data/molly/11OCT6.OIF: 
   [testng] [2024-06-29 01:36:14,124] [pool-1-thread-5] Initializing /data/molly/11OCT3.OIF: 
   [testng] [2024-06-29 01:36:18,438] [pool-1-thread-6] Initializing /data/glen/QuitIJ/4202A2chtest.oif: 
   [testng] [2024-06-29 01:36:18,539] [pool-1-thread-11] Initializing /data/brian/lambda02nm.oib: 
   [testng] [2024-06-29 01:36:19,754] [pool-1-thread-11] Initializing /data/glen/singleseqline.oib: 
   [testng] [2024-06-29 01:36:20,380] [pool-1-thread-11] Initializing /data/stefan/test-with-stefan071024.oib: 
   [testng] [2024-06-29 01:36:23,007] [pool-1-thread-3] Initializing /data/johannes/step5b.bmp: 
   [testng] [2024-06-29 01:36:24,027] [pool-1-thread-3] Initializing /data/glen/singleseqframe.oib: 
   [testng] [2024-06-29 01:36:24,571] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: 
   [testng] [2024-06-29 01:36:27,040] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: 
   [testng] [2024-06-29 01:36:27,883] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: 
   [testng] [2024-06-29 01:36:28,007] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: 
   [testng] [2024-06-29 01:36:28,857] [pool-1-thread-3] Initializing /data/brian/Kaede15.oib: 
   [testng] [2024-06-29 01:36:30,231] [pool-1-thread-11] Initializing /data/ramon/Image_01_01_01_01.oif: 
   [testng] [2024-06-29 01:36:30,886] [pool-1-thread-3] Initializing /data/aryeh/030408 2 1.oib: 
   [testng] [2024-06-29 01:36:31,984] [pool-1-thread-3] Initializing /data/johannes/Image0016/Image0016.oif: 
   [testng] [2024-06-29 01:36:32,604] [pool-1-thread-12] Initializing /data/glen/Null file/test change.oif: 
   [testng] [2024-06-29 01:36:33,506] [pool-1-thread-7] Initializing /data/glen/LUT issue/60x11.oif: 
   [testng] [2024-06-29 01:36:34,545] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: 
   [testng] [2024-06-29 01:36:35,539] [pool-1-thread-8] Initializing /data/molly/11OCT4.OIF: 
   [testng] [2024-06-29 01:36:36,968] [pool-1-thread-11] Initializing /data/stephane/817A_3-0003_01.oib: 
   [testng] [2024-06-29 01:36:38,324] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: 
   [testng] [2024-06-29 01:36:39,335] [pool-1-thread-6] Initializing /data/molly/11OCT10.OIF: 
   [testng] [2024-06-29 01:36:40,630] [pool-1-thread-4] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: 
   [testng] [2024-06-29 01:36:40,894] [pool-1-thread-3] Initializing /data/brian/Al488-yoyo1-2.oib: 
   [testng] [2024-06-29 01:36:41,059] [pool-1-thread-11] Initializing /data/francesco/fGfp.c15.oib: 
   [testng] [2024-06-29 01:36:41,809] [pool-1-thread-4] Initializing /data/glen/singlesimul.oib: 
   [testng] [2024-06-29 01:36:42,062] [pool-1-thread-11] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: 
   [testng] [2024-06-29 01:36:42,183] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: 
   [testng] [2024-06-29 01:36:42,667] [pool-1-thread-4] Initializing /data/glen/Null file/test no change.oif: 
   [testng] [2024-06-29 01:36:44,197] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: 
   [testng] [2024-06-29 01:36:44,316] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oib: 
   [testng] [2024-06-29 01:36:44,625] [pool-1-thread-4] Initializing /data/chris/missegragation-15.oib: 
   [testng] [2024-06-29 01:36:45,183] [pool-1-thread-3] Initializing /data/brian/CFP-GFP2.oib: 
   [testng] [2024-06-29 01:36:45,375] [pool-1-thread-4] Initializing /data/brian/PA-GFP-3.oib: 
   [testng] [2024-06-29 01:36:46,556] [pool-1-thread-9] Initializing /data/barbara/Image_with_working_import.oib: 
   [testng] [2024-06-29 01:36:46,644] [pool-1-thread-3] Initializing /data/marc/V0606L.oib: 
   [testng] [2024-06-29 01:36:48,126] [pool-1-thread-9] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: 
   [testng] [2024-06-29 01:36:48,268] [pool-1-thread-4] Initializing /data/christian/20min.oif: 
   [testng] [2024-06-29 01:36:49,231] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: 
   [testng] [2024-06-29 01:36:49,672] [pool-1-thread-9] Initializing /data/aryeh/BP3 3h ch2.oif: 
   [testng] [2024-06-29 01:36:53,941] [pool-1-thread-2] Initializing /data/glen/QuitIJ/4202A2chtest.oib: 
   [testng] [2024-06-29 01:36:54,905] [pool-1-thread-2] Initializing /data/brian/LILY POLLEN.oib: 
   [testng] [2024-06-29 01:36:57,188] [pool-1-thread-2] Initializing /data/glen/notsaturated.oif: 
   [testng] [2024-06-29 01:36:58,064] [pool-1-thread-1] Initializing /data/brian/FLIP.oib: 
   [testng] [2024-06-29 01:36:58,406] [pool-1-thread-3] Initializing /data/bojana/XYT_FirstBolus.oib: 
   [testng] [2024-06-29 01:36:58,901] [pool-1-thread-7] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: 
   [testng] [2024-06-29 01:36:59,367] [pool-1-thread-3] Initializing /data/yoshihito/XY.oib: 
   [testng] [2024-06-29 01:36:59,846] [pool-1-thread-3] Initializing /data/johannes/Image0006/Image0006.oif: 
   [testng] [2024-06-29 01:36:59,976] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: 
   [testng] [2024-06-29 01:37:00,230] [pool-1-thread-1] Initializing /data/shane/Data Subset/Ex3sol.oif: 
   [testng] [2024-06-29 01:37:01,578] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: 
   [testng] [2024-06-29 01:37:02,063] [pool-1-thread-11] Initializing /data/glen/seqlinestack.oif: 
   [testng] [2024-06-29 01:37:02,276] [pool-1-thread-7] Initializing /data/johannes/step2.bmp: 
   [testng] [2024-06-29 01:37:03,247] [pool-1-thread-7] Initializing /data/glen/15min 200neo lyso SO1.oib: 
   [testng] [2024-06-29 01:37:03,627] [pool-1-thread-1] Initializing /data/stefan/cytosol_08b.oif: 
   [testng] [2024-06-29 01:37:04,404] [pool-1-thread-7] Initializing /data/glen/LUT issue/Greenredfarred.oif: 
   [testng] [2024-06-29 01:37:06,293] [pool-1-thread-3] Initializing /data/jae/Image0001.oib: 
   [testng] [2024-06-29 01:37:06,498] [pool-1-thread-7] Initializing /data/shane/Data Subset/MHC1_control.oif: 
   [testng] [2024-06-29 01:37:07,862] [pool-1-thread-7] Initializing /data/marc/V0606J.oib: 
   [testng] [2024-06-29 01:37:08,958] [pool-1-thread-3] Initializing /data/yoshihito/XY.oif: 
   [testng] [2024-06-29 01:37:08,986] [pool-1-thread-8] Initializing /data/aryeh/PIP2 ESCV  Z 1 after.oib: 
   [testng] [2024-06-29 01:37:10,266] [pool-1-thread-3] Initializing /data/brian/Lambda10nm.oib: 
   [testng] [2024-06-29 01:37:10,910] [pool-1-thread-3] Initializing /data/glen/singleseqframe.oif: 
   [testng] [2024-06-29 01:37:12,666] [pool-1-thread-8] Initializing /data/brian/NEURON_TIMELAPS_2.oib: 
   [testng] [2024-06-29 01:37:12,996] [pool-1-thread-3] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: 
   [testng] [2024-06-29 01:37:13,648] [pool-1-thread-2] Initializing /data/johannes/Image0010/Image0010.oif: 
   [testng] [2024-06-29 01:37:14,929] [pool-1-thread-3] Initializing /data/stefan/cytosol_03e.oib: 
   [testng] [2024-06-29 01:37:15,787] [pool-1-thread-8] Initializing /data/glen/singleseqline.oif: 
   [testng] [2024-06-29 01:37:17,606] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: 
   [testng] [2024-06-29 01:37:17,739] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: 
   [testng] [2024-06-29 01:37:19,089] [pool-1-thread-3] Initializing /data/glen/simulstack.oif: 
   [testng] [2024-06-29 01:37:19,497] [pool-1-thread-7] Initializing /data/aryeh/control_test.oib: 
   [testng] [2024-06-29 01:37:22,016] [pool-1-thread-2] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: 
   [testng] [2024-06-29 01:37:22,130] [pool-1-thread-8] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: 
   [testng] [2024-06-29 01:37:22,973] [pool-1-thread-8] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: 
   [testng] [2024-06-29 01:37:23,305] [pool-1-thread-2] Initializing /data/molly/11OCT7.OIF: 
   [testng] [2024-06-29 01:37:24,226] [pool-1-thread-4] Initializing /data/allan/new_30min3_1z2.oib: 
   [testng] [2024-06-29 01:37:25,349] [pool-1-thread-4] Initializing /data/kay/IM2pg.oib: 
   [testng] [2024-06-29 01:37:27,043] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib: 
   [testng] [2024-06-29 01:37:27,535] [pool-1-thread-4] Initializing /data/glen/simulstack.oib: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 7632, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 9 minutes 10 seconds
Finished: SUCCESS