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Started by upstream project "BIOFORMATS-test-repo" build number 11 originally caused by: Started by upstream project "Trigger" build number 14 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins4540017818286631517.sh + '[' targa = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_1648_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:31:37,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:31:37,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:31:37,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:31:37,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:31:37,789 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:31:37,789 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:31:37,789 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:31:37,790 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:31:37,790 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 00:31:37,791 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 00:31:37,791 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 722 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-25 00:31:37,802] [main] java.version = 1.8.0_342 [testng] 00:31:37,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:31:37,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:37,895 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-25_00-31-37.log] [testng] 00:31:37,897 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-03-25 00:31:37,899] [main] testng.directory = /data [testng] [2024-03-25 00:31:37,900] [main] testng.configDirectory = /config [testng] [2024-03-25 00:31:37,914] [main] testng.multiplier = 1.0 [testng] [2024-03-25 00:31:37,914] [main] testng.in-memory = false [testng] [2024-03-25 00:31:37,914] [main] testng.allow-missing = false [testng] [2024-03-25 00:31:37,914] [main] user.language = fr [testng] [2024-03-25 00:31:37,914] [main] user.country = FR [testng] [2024-03-25 00:31:37,914] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-03-25 00:31:38,798] [main] ---------------------------------------- [testng] [2024-03-25 00:31:38,798] [main] Total files: 21 [testng] [2024-03-25 00:31:38,798] [main] Scan time: 0.883 s (42 ms/file) [testng] [2024-03-25 00:31:38,798] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-25 00:31:40,943] [pool-1-thread-1] Initializing /data/samples/UTC16.TGA: [testng] 00:31:40,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:31:40,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:40,945 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-25_00-31-40.log] [testng] 00:31:40,946 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a13ed4d - End of configuration. [testng] [2024-03-25 00:31:40,972] [pool-1-thread-12] Initializing /data/samples/UBW8.TGA: [testng] 00:31:40,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:31:40,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:40,973 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-25_00-31-40.log] [testng] 00:31:40,974 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b91ccc9 - End of configuration. [testng] [2024-03-25 00:31:41,025] [pool-1-thread-11] Initializing /data/samples/XING_T24.TGA: [testng] 00:31:41,026 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:31:41,026 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,027 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-25_00-31-41.log] [testng] 00:31:41,027 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40e56c70 - End of configuration. [testng] [2024-03-25 00:31:41,075] [pool-1-thread-10] Initializing /data/samples/FLAG_T32.TGA: [testng] 00:31:41,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:31:41,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,077 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-25_00-31-41.log] [testng] 00:31:41,077 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ce62f48 - End of configuration. [testng] [2024-03-25 00:31:41,149] [pool-1-thread-9] Initializing /data/samples/FLAG_B32.TGA: [testng] 00:31:41,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:31:41,150 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,150 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-25_00-31-41.log] [testng] 00:31:41,151 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2abdbb38 - End of configuration. [testng] [2024-03-25 00:31:41,221] [pool-1-thread-8] Initializing /data/samples/CTC24.TGA: [testng] 00:31:41,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:31:41,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-25_00-31-41.log] [testng] 00:31:41,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c25e79d - End of configuration. [testng] [2024-03-25 00:31:41,251] [pool-1-thread-7] Initializing /data/samples/XING_B24.TGA: [testng] 00:31:41,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:31:41,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,252 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-25_00-31-41.log] [testng] 00:31:41,252 |-INFO in ch.qos.logback.core.sift.SiftProcessor@142537ef - End of configuration. [testng] [2024-03-25 00:31:41,305] [pool-1-thread-6] Initializing /data/samples/CTC16.TGA: [testng] 00:31:41,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:31:41,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,307 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-25_00-31-41.log] [testng] 00:31:41,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cf769f6 - End of configuration. [testng] [2024-03-25 00:31:41,337] [pool-1-thread-5] Initializing /data/samples/FLAG_T16.TGA: [testng] 00:31:41,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:31:41,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,338 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-25_00-31-41.log] [testng] 00:31:41,338 |-INFO in ch.qos.logback.core.sift.SiftProcessor@518ce96e - End of configuration. [testng] [2024-03-25 00:31:41,358] [pool-1-thread-4] Initializing /data/samples/FLAG_B24.TGA: [testng] 00:31:41,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:31:41,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-25_00-31-41.log] [testng] 00:31:41,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69adbe65 - End of configuration. [testng] [2024-03-25 00:31:41,379] [pool-1-thread-3] Initializing /data/samples/XING_T32.TGA: [testng] 00:31:41,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:31:41,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,380 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-25_00-31-41.log] [testng] 00:31:41,381 |-INFO in ch.qos.logback.core.sift.SiftProcessor@459edb44 - End of configuration. [testng] [2024-03-25 00:31:41,423] [pool-1-thread-2] Initializing /data/samples/CBW8.TGA: [testng] 00:31:41,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:31:41,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:31:41,424 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-25_00-31-41.log] [testng] 00:31:41,424 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d6b7467 - End of configuration. [testng] [2024-03-25 00:31:43,713] [pool-1-thread-12] Initializing /data/samples/XING_B32.TGA: [testng] [2024-03-25 00:31:43,736] [pool-1-thread-1] Initializing /data/samples/MARBLES.TGA: [testng] [2024-03-25 00:31:43,761] [pool-1-thread-6] Initializing /data/samples/CCM8.TGA: [testng] [2024-03-25 00:31:43,781] [pool-1-thread-9] Initializing /data/samples/XING_T16.TGA: [testng] [2024-03-25 00:31:43,834] [pool-1-thread-8] Initializing /data/samples/UTC32.TGA: [testng] [2024-03-25 00:31:43,879] [pool-1-thread-5] Initializing /data/samples/XING_B16.TGA: [testng] [2024-03-25 00:31:43,961] [pool-1-thread-3] Initializing /data/samples/UCM8.TGA: [testng] [2024-03-25 00:31:44,030] [pool-1-thread-11] Initializing /data/samples/UTC24.TGA: [testng] [2024-03-25 00:31:44,058] [pool-1-thread-7] Initializing /data/samples/FLAG_B16.TGA: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 14 seconds Finished: SUCCESS