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Started by upstream project "BIOFORMATS-test-repo" build number 108 originally caused by: Started by upstream project "Trigger" build number 120 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins751406082153976942.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_16704_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:32:12,682 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:32:12,683 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 02:32:12,683 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:32:12,685 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:32:12,685 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:32:12,685 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:32:12,685 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:32:12,685 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:32:12,686 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:32:12,686 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:32:12,686 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:32:12,686 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:32:12,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:32:12,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:32:12,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:32:12,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:32:12,940 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:32:12,941 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:32:12,941 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:32:12,941 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:32:12,941 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 02:32:12,942 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 02:32:12,942 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 256 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-01 02:32:12,952] [main] java.version = 1.8.0_342 [testng] 02:32:12,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:32:12,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:12,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-01_02-32-12.log] [testng] 02:32:13,001 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-01 02:32:13,003] [main] testng.directory = /data [testng] [2024-07-01 02:32:13,003] [main] testng.configDirectory = /config [testng] [2024-07-01 02:32:13,014] [main] testng.multiplier = 1.0 [testng] [2024-07-01 02:32:13,014] [main] testng.in-memory = false [testng] [2024-07-01 02:32:13,015] [main] testng.allow-missing = false [testng] [2024-07-01 02:32:13,015] [main] user.language = fr [testng] [2024-07-01 02:32:13,015] [main] user.country = FR [testng] [2024-07-01 02:32:13,015] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-01 02:32:14,065] [main] ---------------------------------------- [testng] [2024-07-01 02:32:14,065] [main] Total files: 103 [testng] [2024-07-01 02:32:14,065] [main] Scan time: 1.05 s (10 ms/file) [testng] [2024-07-01 02:32:14,065] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-01 02:32:21,706] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 02:32:21,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:32:21,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:21,707 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-01_02-32-21.log] [testng] 02:32:21,708 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6333147a - End of configuration. [testng] [2024-07-01 02:32:21,739] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] 02:32:21,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:32:21,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:21,741 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-01_02-32-21.log] [testng] 02:32:21,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19fb9ffb - End of configuration. [testng] [2024-07-01 02:32:21,760] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] 02:32:21,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:32:21,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:21,761 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-01_02-32-21.log] [testng] 02:32:21,762 |-INFO in ch.qos.logback.core.sift.SiftProcessor@559f4408 - End of configuration. [testng] [2024-07-01 02:32:21,776] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] 02:32:21,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:32:21,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:21,777 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-01_02-32-21.log] [testng] 02:32:21,777 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28f5e7bd - End of configuration. [testng] [2024-07-01 02:32:21,817] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 02:32:21,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:32:21,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:21,819 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-01_02-32-21.log] [testng] 02:32:21,819 |-INFO in ch.qos.logback.core.sift.SiftProcessor@531da48e - End of configuration. [testng] [2024-07-01 02:32:21,836] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] 02:32:21,837 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:32:21,837 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:21,838 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-01_02-32-21.log] [testng] 02:32:21,838 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18e08648 - End of configuration. [testng] [2024-07-01 02:32:21,949] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] 02:32:21,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:32:21,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:21,950 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-01_02-32-21.log] [testng] 02:32:21,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39e52171 - End of configuration. [testng] [2024-07-01 02:32:21,967] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] 02:32:21,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:32:21,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:21,969 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-01_02-32-21.log] [testng] 02:32:21,969 |-INFO in ch.qos.logback.core.sift.SiftProcessor@746995b9 - End of configuration. [testng] [2024-07-01 02:32:21,983] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3: [testng] 02:32:21,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:32:21,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:21,984 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-01_02-32-21.log] [testng] 02:32:21,985 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58a5ed70 - End of configuration. [testng] [2024-07-01 02:32:22,084] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3: [testng] 02:32:22,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:32:22,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:22,085 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-01_02-32-22.log] [testng] 02:32:22,086 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1842b769 - End of configuration. [testng] [2024-07-01 02:32:22,108] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] 02:32:22,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:32:22,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:22,109 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-01_02-32-22.log] [testng] 02:32:22,110 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7dc68fed - End of configuration. [testng] [2024-07-01 02:32:22,137] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3: [testng] 02:32:22,138 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:32:22,138 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:32:22,138 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-01_02-32-22.log] [testng] 02:32:22,139 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fbf0911 - End of configuration. [testng] [2024-07-01 02:32:24,225] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-07-01 02:32:24,258] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-07-01 02:32:24,661] [pool-1-thread-6] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-07-01 02:32:26,055] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-07-01 02:32:26,239] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-07-01 02:32:26,734] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-07-01 02:32:26,800] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-07-01 02:32:27,714] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-07-01 02:32:28,502] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-07-01 02:32:29,166] [pool-1-thread-5] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-07-01 02:32:29,189] [pool-1-thread-7] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-07-01 02:32:29,356] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-07-01 02:32:29,521] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3: [testng] [2024-07-01 02:32:29,527] [pool-1-thread-2] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-07-01 02:32:29,684] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-07-01 02:32:29,746] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-07-01 02:32:29,759] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-07-01 02:32:30,244] [pool-1-thread-7] Initializing /data/jay/DMtest2.dm3: [testng] [2024-07-01 02:32:30,469] [pool-1-thread-4] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-07-01 02:32:30,590] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-07-01 02:32:30,938] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-07-01 02:32:31,251] [pool-1-thread-6] Initializing /data/qa-7642/8.dm4: [testng] [2024-07-01 02:32:31,902] [pool-1-thread-9] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-07-01 02:32:31,911] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-07-01 02:32:32,266] [pool-1-thread-11] Initializing /data/melissa/annotation-test.tif: [testng] [2024-07-01 02:32:32,306] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-07-01 02:32:32,503] [pool-1-thread-8] Initializing /data/qa-21761/example.dm4: [testng] [2024-07-01 02:32:32,590] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-07-01 02:32:33,360] [pool-1-thread-3] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-07-01 02:32:34,134] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-07-01 02:32:34,425] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-07-01 02:32:35,717] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-07-01 02:32:36,022] [pool-1-thread-2] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-07-01 02:32:36,074] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-07-01 02:32:36,188] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-07-01 02:32:36,551] [pool-1-thread-7] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-07-01 02:32:36,661] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-07-01 02:32:36,775] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-07-01 02:32:37,112] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-07-01 02:32:37,886] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-07-01 02:32:38,190] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-07-01 02:32:39,741] [pool-1-thread-6] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-07-01 02:32:40,039] [pool-1-thread-3] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-07-01 02:32:41,105] [pool-1-thread-7] Initializing /data/jay/smallerfile.dm3: [testng] [2024-07-01 02:32:41,879] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-07-01 02:32:41,976] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-07-01 02:32:42,325] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-07-01 02:32:42,470] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-07-01 02:32:44,489] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-07-01 02:32:44,592] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-07-01 02:32:44,769] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-07-01 02:32:44,778] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-07-01 02:32:45,130] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-07-01 02:32:45,185] [pool-1-thread-9] Initializing /data/samples/test-tiles.dm3: [testng] [2024-07-01 02:32:46,100] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-07-01 02:32:46,142] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-07-01 02:32:46,529] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-07-01 02:32:47,535] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-07-01 02:32:48,535] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-07-01 02:32:49,303] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-07-01 02:32:51,822] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-07-01 02:32:51,950] [pool-1-thread-4] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-07-01 02:32:52,154] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-07-01 02:32:52,260] [pool-1-thread-5] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-07-01 02:32:53,577] [pool-1-thread-6] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-07-01 02:32:53,932] [pool-1-thread-5] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-07-01 02:32:54,152] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-07-01 02:32:54,458] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-07-01 02:32:55,041] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-07-01 02:32:55,444] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-07-01 02:32:58,061] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-07-01 02:32:58,568] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-07-01 02:32:59,411] [pool-1-thread-4] Initializing /data/jay/DMtest.dm3: [testng] [2024-07-01 02:33:00,193] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-07-01 02:33:00,319] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-07-01 02:33:01,038] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-07-01 02:33:01,133] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-07-01 02:33:01,400] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-07-01 02:33:01,421] [pool-1-thread-6] Initializing /data/jay/dnasample.tif: [testng] [2024-07-01 02:33:03,022] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-07-01 02:33:03,222] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-07-01 02:33:03,311] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-07-01 02:33:03,754] [pool-1-thread-10] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-07-01 02:33:03,896] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-07-01 02:33:04,085] [pool-1-thread-4] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-07-01 02:33:04,810] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 15 seconds Finished: SUCCESS