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Started by upstream project "BIOFORMATS-test-repo" build number 109
originally caused by:
 Started by upstream project "Trigger" build number 122
 originally caused by:
  Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins10411339919201907705.sh
+ '[' fluoview = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_16964_merge_ci -v /uod/idr/repos/curated/fluoview:/data -v /uod/idr-scratch/merge-ci/curated/fluoview:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 12:51:32,290 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 12:51:32,292 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 12:51:32,292 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 12:51:32,293 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 12:51:32,294 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 12:51:32,294 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 12:51:32,294 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 12:51:32,295 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 12:51:32,295 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 12:51:32,296 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 12:51:32,296 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 12:51:32,296 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 12:51:32,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 12:51:32,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 12:51:32,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 12:51:32,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 12:51:32,581 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 12:51:32,582 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 12:51:32,582 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 12:51:32,582 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 12:51:32,582 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 12:51:32,583 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 12:51:32,583 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 288 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-07-02 12:51:32,593] [main] java.version = 11.0.16
   [testng] 12:51:32,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 12:51:32,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:32,646 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-02_12-51-32.log]
   [testng] 12:51:32,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-07-02 12:51:32,650] [main] testng.directory = /data
   [testng] [2024-07-02 12:51:32,650] [main] testng.configDirectory = /config
   [testng] [2024-07-02 12:51:32,694] [main] testng.multiplier = 1.0
   [testng] [2024-07-02 12:51:32,696] [main] testng.in-memory = false
   [testng] [2024-07-02 12:51:32,697] [main] testng.allow-missing = false
   [testng] [2024-07-02 12:51:32,697] [main] user.language = en
   [testng] [2024-07-02 12:51:32,697] [main] user.country = ${user.country}
   [testng] [2024-07-02 12:51:32,697] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-07-02 12:51:33,489] [main] ----------------------------------------
   [testng] [2024-07-02 12:51:33,489] [main] Total files: 14
   [testng] [2024-07-02 12:51:33,489] [main] Scan time: 0.792 s (56 ms/file)
   [testng] [2024-07-02 12:51:33,489] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-07-02 12:51:39,303] [pool-1-thread-1] Initializing /data/timg/LiveThree-xyzt.tif: 
   [testng] 12:51:39,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 12:51:39,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-02_12-51-39.log]
   [testng] 12:51:39,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f129bdb - End of configuration.
   [testng] [2024-07-02 12:51:39,443] [pool-1-thread-12] Initializing /data/shalin/40xNA0.6-512x512.tif: 
   [testng] 12:51:39,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 12:51:39,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,444 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-02_12-51-39.log]
   [testng] 12:51:39,445 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d7b382a - End of configuration.
   [testng] [2024-07-02 12:51:39,534] [pool-1-thread-11] Initializing /data/timg/LiveOne.tif: 
   [testng] 12:51:39,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 12:51:39,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,535 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-02_12-51-39.log]
   [testng] 12:51:39,536 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cb7be07 - End of configuration.
   [testng] [2024-07-02 12:51:39,571] [pool-1-thread-10] Initializing /data/timg/eric-three.tif: 
   [testng] 12:51:39,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 12:51:39,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,572 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-02_12-51-39.log]
   [testng] 12:51:39,573 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c47c972 - End of configuration.
   [testng] [2024-07-02 12:51:39,637] [pool-1-thread-9] Initializing /data/timg/eric-three-projection.tif: 
   [testng] 12:51:39,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 12:51:39,638 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,638 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-02_12-51-39.log]
   [testng] 12:51:39,638 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b5badd5 - End of configuration.
   [testng] [2024-07-02 12:51:39,674] [pool-1-thread-8] Initializing /data/timg/eric-one-3d.tif: 
   [testng] 12:51:39,675 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 12:51:39,675 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,675 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-02_12-51-39.log]
   [testng] 12:51:39,676 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59198ba9 - End of configuration.
   [testng] [2024-07-02 12:51:39,747] [pool-1-thread-7] Initializing /data/jae/BrdU.1c-1.z.Live1-25-2005_11-58-40_AM.tif: 
   [testng] 12:51:39,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 12:51:39,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,748 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-02_12-51-39.log]
   [testng] 12:51:39,749 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3965c4cc - End of configuration.
   [testng] [2024-07-02 12:51:39,785] [pool-1-thread-6] Initializing /data/brian/DBTRG 2X 1a-1.tif: 
   [testng] 12:51:39,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 12:51:39,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,787 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-02_12-51-39.log]
   [testng] 12:51:39,787 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e2e5006 - End of configuration.
   [testng] [2024-07-02 12:51:39,860] [pool-1-thread-5] Initializing /data/aaron/olympus_fv500.tif: 
   [testng] 12:51:39,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 12:51:39,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,860 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-02_12-51-39.log]
   [testng] 12:51:39,861 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25e0d02c - End of configuration.
   [testng] [2024-07-02 12:51:39,966] [pool-1-thread-4] Initializing /data/brian/DBTRG 2X 1a-1_DSP.TIF: 
   [testng] 12:51:39,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 12:51:39,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:39,967 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-02_12-51-39.log]
   [testng] 12:51:39,967 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e805b8e - End of configuration.
   [testng] [2024-07-02 12:51:40,017] [pool-1-thread-3] Initializing /data/timg/eric-one.tif: 
   [testng] 12:51:40,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 12:51:40,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:40,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-02_12-51-40.log]
   [testng] 12:51:40,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ad50b16 - End of configuration.
   [testng] [2024-07-02 12:51:40,138] [pool-1-thread-2] Initializing /data/timg/LiveTwo.tif: 
   [testng] 12:51:40,138 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 12:51:40,138 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:51:40,139 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-02_12-51-40.log]
   [testng] 12:51:40,139 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68a68765 - End of configuration.
   [testng] [2024-07-02 12:51:42,069] [pool-1-thread-11] Initializing /data/timg/E1-v2(11 som).tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 16 seconds
Finished: SUCCESS