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Started by upstream project "BIOFORMATS-test-repo" build number 110
originally caused by:
 Started by upstream project "Trigger" build number 123
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins11093864044089595105.sh
+ '[' avi = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_17115_merge_ci -v /uod/idr/repos/curated/avi:/data -v /uod/idr-scratch/merge-ci/curated/avi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:51:45,418 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:51:45,420 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:51:45,420 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:51:45,420 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:51:45,421 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:51:45,421 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:51:45,422 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:51:45,422 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:51:45,422 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:51:45,423 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:51:45,423 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:51:45,423 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:51:45,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:51:45,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:51:45,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:51:45,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:51:45,645 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:51:45,645 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:51:45,646 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:51:45,646 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:51:45,646 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:51:45,647 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:51:45,647 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 225 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-07-03 01:51:45,656] [main] java.version = 17.0.2
   [testng] 01:51:45,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:51:45,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:51:45,708 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-03_01-51-45.log]
   [testng] 01:51:45,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-07-03 01:51:45,711] [main] testng.directory = /data
   [testng] [2024-07-03 01:51:45,712] [main] testng.configDirectory = /config
   [testng] [2024-07-03 01:51:45,720] [main] testng.multiplier = 1.0
   [testng] [2024-07-03 01:51:45,721] [main] testng.in-memory = false
   [testng] [2024-07-03 01:51:45,721] [main] testng.allow-missing = false
   [testng] [2024-07-03 01:51:45,722] [main] user.language = en
   [testng] [2024-07-03 01:51:45,722] [main] user.country = ${user.country}
   [testng] [2024-07-03 01:51:45,722] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-07-03 01:51:46,632] [main] ----------------------------------------
   [testng] [2024-07-03 01:51:46,632] [main] Total files: 40
   [testng] [2024-07-03 01:51:46,632] [main] Scan time: 0.91 s (22 ms/file)
   [testng] [2024-07-03 01:51:46,632] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 38 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-07-03 01:55:54,540] [pool-1-thread-1] Initializing /data/william/worm.avi: 
   [testng] 01:55:54,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:55:54,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:54,543 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-03_01-55-54.log]
   [testng] 01:55:54,544 |-INFO in ch.qos.logback.core.sift.SiftProcessor@eeb507 - End of configuration.
   [testng] [2024-07-03 01:55:54,589] [pool-1-thread-12] Initializing /data/kurt/40x_6um.avi: 
   [testng] 01:55:54,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:55:54,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:54,591 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-03_01-55-54.log]
   [testng] 01:55:54,591 |-INFO in ch.qos.logback.core.sift.SiftProcessor@100430a7 - End of configuration.
   [testng] [2024-07-03 01:55:54,734] [pool-1-thread-11] Initializing /data/jcb/JCB 201203159/JCB_201203159_0_4.avi: 
   [testng] 01:55:54,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:55:54,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:54,740 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-03_01-55-54.log]
   [testng] 01:55:54,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54800439 - End of configuration.
   [testng] [2024-07-03 01:55:54,777] [pool-1-thread-10] Initializing /data/qa-7336/2X_63X-DAPI-Emilin2_Filter_Render_Series.avi: 
   [testng] 01:55:54,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:55:54,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:54,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-03_01-55-54.log]
   [testng] 01:55:54,781 |-INFO in ch.qos.logback.core.sift.SiftProcessor@641cd63a - End of configuration.
   [testng] [2024-07-03 01:55:54,872] [pool-1-thread-9] Initializing /data/qa-5019/nemo-2_1_.avi: 
   [testng] 01:55:54,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:55:54,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:54,875 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-03_01-55-54.log]
   [testng] 01:55:54,876 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22a2eb9b - End of configuration.
   [testng] [2024-07-03 01:55:54,947] [pool-1-thread-8] Initializing /data/jcb/JCB 201203159/JCB_201203159_0_3.avi: 
   [testng] 01:55:54,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:55:54,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:54,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-03_01-55-54.log]
   [testng] 01:55:54,949 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3252505b - End of configuration.
   [testng] [2024-07-03 01:55:54,986] [pool-1-thread-7] Initializing /data/roger/spheroid1-crop.lsm movie 2.avi: 
   [testng] 01:55:54,986 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:55:54,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:54,988 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-03_01-55-54.log]
   [testng] 01:55:54,989 |-INFO in ch.qos.logback.core.sift.SiftProcessor@231d0f30 - End of configuration.
   [testng] [2024-07-03 01:55:55,090] [pool-1-thread-6] Initializing /data/kurt/63x_6um.avi: 
   [testng] 01:55:55,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:55:55,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:55,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-03_01-55-55.log]
   [testng] 01:55:55,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b45ffc3 - End of configuration.
   [testng] [2024-07-03 01:55:55,209] [pool-1-thread-5] Initializing /data/roger/spheroid1-crop.lsm movie.avi: 
   [testng] 01:55:55,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:55:55,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:55,210 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-03_01-55-55.log]
   [testng] 01:55:55,211 |-INFO in ch.qos.logback.core.sift.SiftProcessor@437bb3 - End of configuration.
   [testng] [2024-07-03 01:55:55,289] [pool-1-thread-4] Initializing /data/qa-5019/nemo-2_10_20.avi: 
   [testng] 01:55:55,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:55:55,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:55,291 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-03_01-55-55.log]
   [testng] 01:55:55,292 |-INFO in ch.qos.logback.core.sift.SiftProcessor@138cfb38 - End of configuration.
   [testng] [2024-07-03 01:55:55,363] [pool-1-thread-3] Initializing /data/chris/APZ04_009.avi: 
   [testng] 01:55:55,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:55:55,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:55:55,365 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-03_01-55-55.log]
   [testng] 01:55:55,365 |-INFO in ch.qos.logback.core.sift.SiftProcessor@180a77c0 - End of configuration.
   [testng] [2024-07-03 01:56:00,726] [pool-1-thread-2] Initializing /data/chip_avi/Level004-WA-116.avi: 
   [testng] 01:56:00,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:56:00,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:56:00,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-03_01-56-00.log]
   [testng] 01:56:00,727 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67c5f9be - End of configuration.
   [testng] [2024-07-03 01:56:02,965] [pool-1-thread-1] Initializing /data/qa-11011/M-flow10001.avi: 
   [testng] [2024-07-03 01:56:03,100] [pool-1-thread-8] Initializing /data/chip_avi/Level001-ES-083.avi: 
   [testng] [2024-07-03 01:56:03,120] [pool-1-thread-11] Initializing /data/roger/op9middle40x.lsm movie.avi: 
   [testng] [2024-07-03 01:56:03,154] [pool-1-thread-4] Initializing /data/jae/20xD_5minfor14h.avi: 
   [testng] [2024-07-03 01:56:03,967] [pool-1-thread-2] Initializing /data/ascb/TIRF.avi: 
   [testng] [2024-07-03 01:56:04,048] [pool-1-thread-9] Initializing /data/chip_avi/Level002-DB-090.avi: 
   [testng] [2024-07-03 01:56:04,070] [pool-1-thread-5] Initializing /data/qa-7560/Ex9 ALADIN WT KO KI_DIC_ 31_07_2013_M1.avi: 
   [testng] [2024-07-03 01:56:04,504] [pool-1-thread-7] Initializing /data/kurt/40x_6um_2.avi: 
   [testng] [2024-07-03 01:56:05,110] [pool-1-thread-6] Initializing /data/curtis/mri-stack-ij-new.avi: 
   [testng] [2024-07-03 01:56:05,123] [pool-1-thread-12] Initializing /data/roger/op9middle40x.lsm movie 3.avi: 
   [testng] [2024-07-03 01:56:05,146] [pool-1-thread-10] Initializing /data/qa-4232/11051920xdrywithincubatoronthenoff_Subset.avi: 
   [testng] [2024-07-03 01:56:05,317] [pool-1-thread-8] Initializing /data/prairie/cornea dc and macs.AVI: 
   [testng] [2024-07-03 01:56:05,471] [pool-1-thread-9] Initializing /data/simon/24_bit_problem.avi: 
   [testng] [2024-07-03 01:56:05,620] [pool-1-thread-6] Initializing /data/jules/GUV_long15N_10_20mb_debut_25102011_1_BW.avi: 
   [testng] [2024-07-03 01:56:05,730] [pool-1-thread-11] Initializing /data/roger/op9middle40x.lsm movie 4.avi: 
   [testng] [2024-07-03 01:56:05,977] [pool-1-thread-2] Initializing /data/jcb/JCB 201203159/JCB_201203159_0_5.avi: 
   [testng] [2024-07-03 01:56:06,525] [pool-1-thread-12] Initializing /data/curtis/mri-stack-bf.avi: 
   [testng] [2024-07-03 01:56:06,557] [pool-1-thread-10] Initializing /data/pki/yinghua_USPI2-ASMKT772_111017100001_C10_f1.avi: 
   [testng] [2024-07-03 01:56:06,672] [pool-1-thread-9] Initializing /data/qa-7450/MVI_3610.AVI: 
   [testng] [2024-07-03 01:56:06,954] [pool-1-thread-2] Initializing /data/jules/GUV_long15N_10_10mb_debut_26102011_4.avi: 
   [testng] [2024-07-03 01:56:40,082] [pool-1-thread-1] Initializing /data/sample-avis/rgb-odd-width/HyperStack.avi: 
   [testng] [2024-07-03 01:56:40,090] [pool-1-thread-4] Initializing /data/curtis/mri-stack-ij-old.avi: 
   [testng] [2024-07-03 01:56:40,110] [pool-1-thread-7] Initializing /data/chip_avi/Level003-DB-089.avi: 
   [testng] [2024-07-03 01:56:40,217] [pool-1-thread-6] Initializing /data/sample-avis/extra-chunk/HyperStack.avi: 
   [testng] [2024-07-03 01:56:40,309] [pool-1-thread-11] Initializing /data/roger/op9middle40x.lsm movie 2.avi: 
   [testng] [2024-07-03 01:56:40,608] [pool-1-thread-12] Initializing /data/roger/spheroid1.lsm movie.avi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 2014, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 5 minutes 23 seconds
Finished: SUCCESS