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Started by upstream project "BIOFORMATS-test-repo" build number 112 originally caused by: Started by upstream project "Trigger" build number 125 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins7472281202187820169.sh + '[' apng = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_17484_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:28:32,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:28:32,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:28:32,583 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:28:32,583 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:28:32,608 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:28:32,608 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:28:32,609 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:28:32,609 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:28:32,609 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:28:32,611 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:28:32,611 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 558 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-05 02:28:32,625] [main] java.version = 1.8.0_342 [testng] 02:28:32,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:28:32,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:32,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-05_02-28-32.log] [testng] 02:28:32,885 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-05 02:28:32,901] [main] testng.directory = /data [testng] [2024-07-05 02:28:32,902] [main] testng.configDirectory = /config [testng] [2024-07-05 02:28:32,993] [main] testng.multiplier = 1.0 [testng] [2024-07-05 02:28:32,993] [main] testng.in-memory = false [testng] [2024-07-05 02:28:32,993] [main] testng.allow-missing = false [testng] [2024-07-05 02:28:32,993] [main] user.language = en [testng] [2024-07-05 02:28:32,993] [main] user.country = ${user.country} [testng] [2024-07-05 02:28:32,994] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-05 02:28:34,027] [main] ---------------------------------------- [testng] [2024-07-05 02:28:34,027] [main] Total files: 21 [testng] [2024-07-05 02:28:34,027] [main] Scan time: 1.033 s (49 ms/file) [testng] [2024-07-05 02:28:34,027] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-05 02:28:35,376] [pool-1-thread-1] Initializing /data/samples/Sun.png: [testng] 02:28:35,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:28:35,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,377 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-05_02-28-35.log] [testng] 02:28:35,378 |-INFO in ch.qos.logback.core.sift.SiftProcessor@663c7359 - End of configuration. [testng] [2024-07-05 02:28:35,422] [pool-1-thread-12] Initializing /data/samples/atom.png: [testng] 02:28:35,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:28:35,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,424 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-05_02-28-35.log] [testng] 02:28:35,424 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58c5fac7 - End of configuration. [testng] [2024-07-05 02:28:35,430] [pool-1-thread-11] Initializing /data/samples/orbit.png: [testng] 02:28:35,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:28:35,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,432 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-05_02-28-35.log] [testng] 02:28:35,432 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21d3244b - End of configuration. [testng] [2024-07-05 02:28:35,440] [pool-1-thread-10] Initializing /data/samples/monkey_apng.png: [testng] 02:28:35,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:28:35,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,441 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-05_02-28-35.log] [testng] 02:28:35,441 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34582ed - End of configuration. [testng] [2024-07-05 02:28:35,450] [pool-1-thread-9] Initializing /data/qa-7473/x.png: [testng] 02:28:35,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:28:35,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,452 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-05_02-28-35.log] [testng] 02:28:35,452 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cc6640 - End of configuration. [testng] [2024-07-05 02:28:35,457] [pool-1-thread-8] Initializing /data/samples/william_wong04.png: [testng] 02:28:35,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:28:35,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,458 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-05_02-28-35.log] [testng] 02:28:35,458 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e47d578 - End of configuration. [testng] [2024-07-05 02:28:35,464] [pool-1-thread-7] Initializing /data/samples/daniel_coltri_two.png: [testng] 02:28:35,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:28:35,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,465 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-05_02-28-35.log] [testng] 02:28:35,465 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a861750 - End of configuration. [testng] [2024-07-05 02:28:35,470] [pool-1-thread-6] Initializing /data/qa-7473/n.tif: [testng] 02:28:35,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:28:35,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-05_02-28-35.log] [testng] 02:28:35,472 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f578de3 - End of configuration. [testng] [2024-07-05 02:28:35,505] [pool-1-thread-5] Initializing /data/samples/MoonPhases.png: [testng] 02:28:35,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:28:35,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,506 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-05_02-28-35.log] [testng] 02:28:35,506 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b5b85ef - End of configuration. [testng] [2024-07-05 02:28:35,511] [pool-1-thread-4] Initializing /data/samples/joanna_viera01.png: [testng] 02:28:35,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:28:35,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,512 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-05_02-28-35.log] [testng] 02:28:35,513 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37e75942 - End of configuration. [testng] [2024-07-05 02:28:35,517] [pool-1-thread-3] Initializing /data/samples/Matrix.png: [testng] 02:28:35,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:28:35,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,518 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-05_02-28-35.log] [testng] 02:28:35,519 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c7b582 - End of configuration. [testng] [2024-07-05 02:28:35,522] [pool-1-thread-2] Initializing /data/samples/phug_logo.png: [testng] 02:28:35,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:28:35,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:35,523 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-05_02-28-35.log] [testng] 02:28:35,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7552f5f7 - End of configuration. [testng] [2024-07-05 02:28:37,370] [pool-1-thread-9] Initializing /data/samples/william_wong02.png: [testng] [2024-07-05 02:28:37,375] [pool-1-thread-2] Initializing /data/samples/spinfox.png: [testng] [2024-07-05 02:28:37,379] [pool-1-thread-6] Initializing /data/samples/william_wong01.png: [testng] [2024-07-05 02:28:37,384] [pool-1-thread-5] Initializing /data/samples/william_wong05.png: [testng] [2024-07-05 02:28:37,391] [pool-1-thread-12] Initializing /data/colin/test.sfstdge.png: [testng] [2024-07-05 02:28:37,396] [pool-1-thread-1] Initializing /data/samples/daniel_coltri_one.png: [testng] [2024-07-05 02:28:37,403] [pool-1-thread-4] Initializing /data/samples/PhugAnimation3.png: [testng] [2024-07-05 02:28:37,412] [pool-1-thread-3] Initializing /data/samples/chompy2.png: [testng] [2024-07-05 02:28:37,417] [pool-1-thread-11] Initializing /data/samples/StarV838.png: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 13 seconds Finished: SUCCESS