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Started by upstream project "BIOFORMATS-test-repo" build number 115 originally caused by: Started by upstream project "Trigger" build number 128 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins11731539032010067692.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_17861_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:18,172 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:18,174 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:18,174 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:18,175 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:18,176 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:18,176 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:18,176 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:18,176 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:18,177 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:18,177 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:18,177 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:18,177 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:18,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:18,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:18,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:18,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:18,531 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:18,531 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:18,531 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:18,532 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:18,532 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:21:18,533 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:21:18,533 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 356 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-08 01:21:18,547] [main] java.version = 1.8.0_342 [testng] 01:21:18,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:18,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:18,613 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-08_01-21-18.log] [testng] 01:21:18,615 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-08 01:21:18,617] [main] testng.directory = /data [testng] [2024-07-08 01:21:18,617] [main] testng.configDirectory = /config [testng] [2024-07-08 01:21:18,632] [main] testng.multiplier = 1.0 [testng] [2024-07-08 01:21:18,633] [main] testng.in-memory = false [testng] [2024-07-08 01:21:18,633] [main] testng.allow-missing = false [testng] [2024-07-08 01:21:18,633] [main] user.language = fr [testng] [2024-07-08 01:21:18,633] [main] user.country = FR [testng] [2024-07-08 01:21:18,633] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-08 01:21:26,762] [main] ---------------------------------------- [testng] [2024-07-08 01:21:26,763] [main] Total files: 4426 [testng] [2024-07-08 01:21:26,763] [main] Scan time: 8.129 s (1 ms/file) [testng] [2024-07-08 01:21:26,763] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-08 01:23:36,477] [pool-1-thread-1] Initializing /data/lzw/DendriteForks.tif: [testng] 01:23:36,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:36,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,479 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-08_01-23-36.log] [testng] 01:23:36,479 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6db0aa3b - End of configuration. [testng] [2024-07-08 01:23:36,549] [pool-1-thread-12] Initializing /data/damian/27m.tiff: [testng] 01:23:36,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:36,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,550 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-08_01-23-36.log] [testng] 01:23:36,550 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e9ad88b - End of configuration. [testng] [2024-07-08 01:23:36,585] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] 01:23:36,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:36,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,586 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-08_01-23-36.log] [testng] 01:23:36,586 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5375f7e - End of configuration. [testng] [2024-07-08 01:23:36,623] [pool-1-thread-10] Initializing /data/samples/cielab/Ski_TC8-03_sRGB.tif: [testng] 01:23:36,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:36,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,624 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-08_01-23-36.log] [testng] 01:23:36,624 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1944ce0e - End of configuration. [testng] [2024-07-08 01:23:36,685] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] 01:23:36,685 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:36,685 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,686 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-08_01-23-36.log] [testng] 01:23:36,686 |-INFO in ch.qos.logback.core.sift.SiftProcessor@205b7d6a - End of configuration. [testng] [2024-07-08 01:23:36,717] [pool-1-thread-8] Initializing /data/public/libtiff/jim___gg.tif: [testng] 01:23:36,718 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:36,718 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,718 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-08_01-23-36.log] [testng] 01:23:36,719 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12aaac99 - End of configuration. [testng] [2024-07-08 01:23:36,744] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] 01:23:36,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:36,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,745 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-08_01-23-36.log] [testng] 01:23:36,745 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64fad424 - End of configuration. [testng] [2024-07-08 01:23:36,776] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z037.tif: [testng] 01:23:36,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:36,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,777 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-08_01-23-36.log] [testng] 01:23:36,778 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ae1e787 - End of configuration. [testng] [2024-07-08 01:23:36,815] [pool-1-thread-5] Initializing /data/josiah/cell-Z28.C0.tiff: [testng] 01:23:36,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:36,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,816 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-08_01-23-36.log] [testng] 01:23:36,816 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75cc4369 - End of configuration. [testng] [2024-07-08 01:23:36,854] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] 01:23:36,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:36,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,854 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-08_01-23-36.log] [testng] 01:23:36,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e198a0f - End of configuration. [testng] [2024-07-08 01:23:36,878] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] 01:23:36,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:36,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,879 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-08_01-23-36.log] [testng] 01:23:36,880 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41dc1003 - End of configuration. [testng] [2024-07-08 01:23:36,907] [pool-1-thread-2] Initializing /data/samples/melissa/imagej-last-ifd/Rat_Hippocampal_Neuron.tif: [testng] 01:23:36,907 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:36,907 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:36,907 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-08_01-23-36.log] [testng] 01:23:36,908 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35fe657 - End of configuration. [testng] [2024-07-08 01:23:40,056] [pool-1-thread-1] Initializing /data/josiah/cell-Z21.C1.tiff: [testng] [2024-07-08 01:23:40,082] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z005.tif: [testng] [2024-07-08 01:23:40,105] [pool-1-thread-5] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-07-08 01:23:40,151] [pool-1-thread-12] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-07-08 01:23:40,179] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z039.tif: [testng] [2024-07-08 01:23:40,205] [pool-1-thread-6] Initializing /data/alexa/test4.tif: [testng] [2024-07-08 01:23:40,232] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-07-08 01:23:40,282] [pool-1-thread-7] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-07-08 01:23:40,307] [pool-1-thread-8] Initializing /data/damian/15m.tiff: [testng] [2024-07-08 01:23:40,336] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-05.tiff: [testng] [2024-07-08 01:23:40,360] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-07-08 01:23:41,016] [pool-1-thread-4] Initializing /data/misc/mri-stack.tif: [testng] [2024-07-08 01:23:41,069] [pool-1-thread-2] Initializing /data/ascb/14312-p125A colocalization.tif: [testng] [2024-07-08 01:23:41,126] [pool-1-thread-11] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-07-08 01:23:41,459] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-07-08 01:23:41,510] [pool-1-thread-8] Initializing /data/josh/3Aa_C2_TP1.tiff: [testng] [2024-07-08 01:23:41,585] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-07-08 01:23:41,674] [pool-1-thread-1] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-07-08 01:23:41,735] [pool-1-thread-7] Initializing /data/samples/melissa/16-signed-lzw-differenced.tiff: [testng] [2024-07-08 01:23:42,045] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-07-08 01:23:42,340] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-07-08 01:23:42,428] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-07-08 01:23:42,622] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-07-08 01:23:42,889] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z022.tif: [testng] [2024-07-08 01:23:42,914] [pool-1-thread-4] Initializing /data/josiah/cell-Z35.C0.tiff: [testng] [2024-07-08 01:23:42,975] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-07-08 01:23:43,057] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-07-08 01:23:43,239] [pool-1-thread-3] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-07-08 01:23:43,316] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-07-08 01:23:43,408] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-07-08 01:23:43,486] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-07-08 01:23:43,817] [pool-1-thread-2] Initializing /data/public/libtiff/jim___cg.tif: [testng] [2024-07-08 01:23:43,838] [pool-1-thread-4] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-07-08 01:23:43,861] [pool-1-thread-12] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-07-08 01:23:44,157] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z009.tif: [testng] [2024-07-08 01:23:44,203] [pool-1-thread-5] Initializing /data/josiah/cell-Z31.C1.tiff: [testng] [2024-07-08 01:23:44,296] [pool-1-thread-6] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-07-08 01:23:44,332] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z053.tif: [testng] [2024-07-08 01:23:44,554] [pool-1-thread-8] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-07-08 01:23:44,579] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] [2024-07-08 01:23:44,645] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-07-08 01:23:44,698] [pool-1-thread-12] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-07-08 01:23:44,831] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-07-08 01:23:44,903] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z019.tif: [testng] [2024-07-08 01:23:44,973] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-07-08 01:23:45,001] [pool-1-thread-3] Initializing /data/samples/melissa/imagej-4gb/4gb-test&sizeX=1024&sizeY=1024&pixelType=uint16&sizeC=2050.fake: [testng] 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[pool-1-thread-12] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-07-08 01:24:50,859] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-07-08 01:24:51,080] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-07-08 01:24:51,142] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z049.tif: [testng] [2024-07-08 01:24:51,189] [pool-1-thread-10] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-07-08 01:24:51,623] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z041.tif: [testng] [2024-07-08 01:24:51,725] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs008.TIF: [testng] [2024-07-08 01:24:51,800] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-07-08 01:24:51,969] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x64.tiff: [testng] [2024-07-08 01:24:52,013] [pool-1-thread-12] Initializing /data/bene/3d-example-stack.tif: [testng] [2024-07-08 01:24:52,356] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-07-08 01:24:52,389] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-07-08 01:24:52,777] [pool-1-thread-1] Initializing /data/josiah/cell-Z18.C0.tiff: [testng] [2024-07-08 01:24:52,819] [pool-1-thread-6] Initializing /data/paulh/quickpollen4_w1_t1.tif: [testng] [2024-07-08 01:24:53,240] [pool-1-thread-5] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-07-08 01:24:53,310] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-07-08 01:24:53,975] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-05.tiff: [testng] [2024-07-08 01:24:54,070] [pool-1-thread-1] Initializing /data/josiah/cell-Z38.C1.tiff: [testng] [2024-07-08 01:24:54,263] [pool-1-thread-11] 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[2024-07-08 01:24:55,581] [pool-1-thread-12] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-07-08 01:24:55,642] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z028.tif: [testng] [2024-07-08 01:24:55,666] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z051.tif: [testng] [2024-07-08 01:24:55,786] [pool-1-thread-8] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] [2024-07-08 01:24:55,946] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-07-08 01:24:56,160] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-07-08 01:24:56,276] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-07-08 01:24:56,329] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z008.tif: [testng] [2024-07-08 01:24:56,399] [pool-1-thread-2] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-07-08 01:24:56,873] [pool-1-thread-8] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-07-08 01:24:56,913] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z013.tif: [testng] [2024-07-08 01:24:57,946] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z027.tif: [testng] [2024-07-08 01:24:57,970] [pool-1-thread-11] Initializing /data/paul-van-schayck/myfile.tif: [testng] [2024-07-08 01:24:58,120] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z016.tif: [testng] [2024-07-08 01:24:58,147] [pool-1-thread-12] Initializing /data/damian/09m.tiff: [testng] [2024-07-08 01:24:58,173] [pool-1-thread-1] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-07-08 01:24:58,460] [pool-1-thread-4] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-07-08 01:24:58,673] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-07-08 01:24:58,712] [pool-1-thread-11] 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R) calb pul.tif: [testng] [2024-07-08 01:25:01,453] [pool-1-thread-1] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-07-08 01:25:01,608] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-02.tiff: [testng] [2024-07-08 01:25:01,624] [pool-1-thread-4] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] [2024-07-08 01:25:01,729] [pool-1-thread-3] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] [2024-07-08 01:25:01,792] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-02.tiff: [testng] [2024-07-08 01:25:01,940] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x48.tiff: [testng] [2024-07-08 01:25:02,859] [pool-1-thread-6] Initializing /data/public/condensation/E4.pattern7.tif: [testng] [2024-07-08 01:25:02,977] [pool-1-thread-5] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] [2024-07-08 01:25:03,349] [pool-1-thread-2] Initializing /data/victoria/scan4_1hr_20X_.352g_n180p_2z_0.387644res_9int_C2_TP1.tiff: [testng] [2024-07-08 01:25:03,843] [pool-1-thread-1] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-07-08 01:25:04,419] [pool-1-thread-4] Initializing /data/public/condensation/E4.pattern6.tif: [testng] [2024-07-08 01:25:04,506] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-07-08 01:25:04,607] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-07-08 01:25:05,424] [pool-1-thread-5] Initializing /data/lzw/bigtest5.tif: [testng] [2024-07-08 01:25:05,486] [pool-1-thread-6] Initializing /data/misc/ms-paint.png: [testng] [2024-07-08 01:25:05,492] [pool-1-thread-2] Initializing /data/public/condensation/A6.pattern1.tif: [testng] [2024-07-08 01:25:05,600] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-07-08 01:25:06,278] [pool-1-thread-10] Initializing /data/stephane/001_z01.tif: [testng] [2024-07-08 01:25:06,443] [pool-1-thread-1] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-07-08 01:25:06,483] [pool-1-thread-4] Initializing /data/ascb/CYT-55_HowellGolgiRibbonOutlined_4800.tif: [testng] [2024-07-08 01:25:06,546] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-07-08 01:25:06,639] [pool-1-thread-2] Initializing /data/julien/Genevievevanille.TIF: [testng] [2024-07-08 01:25:07,232] [pool-1-thread-12] Initializing /data/ascb/FND-11_PorterPaladeEarly_4800.tif: [testng] [2024-07-08 01:25:07,286] [pool-1-thread-6] Initializing /data/public/condensation/A10.pattern2.tif: [testng] [2024-07-08 01:25:07,967] [pool-1-thread-2] Initializing /data/public/libtiff/jim___dg.tif: [testng] [2024-07-08 01:25:08,009] [pool-1-thread-10] Initializing /data/josiah/cell-Z32.C0.tiff: [testng] [2024-07-08 01:25:08,143] [pool-1-thread-1] Initializing 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01:25:14,106] [pool-1-thread-9] Initializing /data/josiah/cell-Z27.C0.tiff: [testng] [2024-07-08 01:25:14,446] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-07-08 01:25:14,545] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z054.tif: [testng] [2024-07-08 01:25:15,041] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-07-08 01:25:15,187] [pool-1-thread-10] Initializing /data/tom-kazimiers/test_exiftool2.tiff: [testng] [2024-07-08 01:25:15,468] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z018.tif: [testng] [2024-07-08 01:25:15,513] [pool-1-thread-9] Initializing /data/christine/Image5D_4color test stack/test stack.tif: [testng] [2024-07-08 01:25:15,899] [pool-1-thread-10] Initializing /data/big-images/4kx4k.tif: [testng] [2024-07-08 01:25:16,297] [pool-1-thread-8] Initializing /data/julien/baldinsug1LMP2col.TIF: [testng] [2024-07-08 01:25:16,544] [pool-1-thread-9] Initializing 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[testng] [2024-07-08 01:25:18,420] [pool-1-thread-3] Initializing /data/public/condensation/C4.pattern1.tif: [testng] [2024-07-08 01:25:19,244] [pool-1-thread-9] Initializing /data/ascb/bad/FND-17_FawcettNucleus_4800.tif: [testng] [2024-07-08 01:25:19,336] [pool-1-thread-5] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-07-08 01:25:19,555] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs013.TIF: [testng] [2024-07-08 01:25:19,881] [pool-1-thread-12] Initializing /data/josiah/cell-Z4.C1.tiff: [testng] [2024-07-08 01:25:20,202] [pool-1-thread-3] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-07-08 01:25:20,686] [pool-1-thread-12] Initializing /data/public/condensation/A1.pattern1.tif: [testng] [2024-07-08 01:25:20,804] [pool-1-thread-5] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-07-08 01:25:20,898] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-07-08 01:25:21,033] [pool-1-thread-3] Initializing /data/josiah/cell-Z26.C1.tiff: [testng] [2024-07-08 01:25:21,525] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z014.tif: [testng] [2024-07-08 01:25:21,553] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-07-08 01:25:21,829] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-07-08 01:25:21,907] [pool-1-thread-12] Initializing /data/ascb/FND-27_PaladeGolgi_4800.tif: [testng] [2024-07-08 01:25:22,191] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] [2024-07-08 01:25:22,309] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z022.tif: [testng] [2024-07-08 01:25:22,498] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0254.TIF: [testng] [2024-07-08 01:25:22,563] [pool-1-thread-7] Initializing /data/josiah/cell-Z32.C1.tiff: [testng] [2024-07-08 01:25:22,706] [pool-1-thread-8] Initializing 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[pool-1-thread-7] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-07-08 01:26:06,223] [pool-1-thread-10] Initializing /data/public/libtiff/jello.tif: [testng] [2024-07-08 01:26:06,259] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-07-08 01:26:06,553] [pool-1-thread-10] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-07-08 01:26:06,868] [pool-1-thread-12] Initializing /data/josiah/cell-Z34.C0.tiff: [testng] [2024-07-08 01:26:06,909] [pool-1-thread-5] Initializing /data/josiah/cell-Z9.C1.tiff: [testng] [2024-07-08 01:26:07,435] [pool-1-thread-7] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-07-08 01:26:08,080] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-07-08 01:26:08,150] [pool-1-thread-5] Initializing /data/lzw/Cortico-Striatal.tif: [testng] [2024-07-08 01:26:08,266] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-32.tiff: [testng] [2024-07-08 01:26:08,320] [pool-1-thread-10] Initializing /data/josiah/cell-Z17.C1.tiff: [testng] [2024-07-08 01:26:08,723] [pool-1-thread-4] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina.tif: [testng] [2024-07-08 01:26:09,029] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-07-08 01:26:09,247] [pool-1-thread-7] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-07-08 01:26:09,433] [pool-1-thread-12] Initializing /data/martin/tester.tif: [testng] [2024-07-08 01:26:10,030] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z036.tif: [testng] [2024-07-08 01:26:10,175] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z020.tif: [testng] [2024-07-08 01:26:10,272] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-07-08 01:26:10,390] [pool-1-thread-10] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] [2024-07-08 01:26:12,192] [pool-1-thread-5] Initializing 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[pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs000.TIF: [testng] [2024-07-08 01:26:15,515] [pool-1-thread-4] Initializing /data/qa-4965/2012_10_31_GFPbiflinmKate_29hpf_20x_1.2_7_001.tif: [testng] [2024-07-08 01:26:15,737] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs012.TIF: [testng] [2024-07-08 01:26:16,458] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-07-08 01:26:17,324] [pool-1-thread-12] Initializing /data/samples/cielab/Ski_TC8-03_ROMM.tif: [testng] [2024-07-08 01:26:17,734] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-07-08 01:26:18,247] [pool-1-thread-11] Initializing /data/big-images/8kx8k.tif: [testng] [2024-07-08 01:26:18,302] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-07-08 01:26:18,714] [pool-1-thread-6] Initializing /data/curtis/map/brown-fox: [testng] [2024-07-08 01:26:19,051] [pool-1-thread-4] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-07-08 01:26:19,691] [pool-1-thread-6] Initializing /data/damian/00m.tiff: [testng] [2024-07-08 01:26:21,208] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0248.TIF: [testng] [2024-07-08 01:26:22,232] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z030.tif: [testng] [2024-07-08 01:26:22,403] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] [2024-07-08 01:26:22,445] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-07-08 01:26:22,673] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-07-08 01:26:22,722] [pool-1-thread-7] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-07-08 01:26:23,152] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x16.tiff: [testng] [2024-07-08 01:26:23,171] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-07-08 01:26:23,513] [pool-1-thread-8] Initializing /data/josiah/cell-Z8.C1.tiff: [testng] [2024-07-08 01:26:23,541] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-07-08 01:26:24,330] [pool-1-thread-4] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-07-08 01:26:25,710] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-07-08 01:26:26,158] [pool-1-thread-7] Initializing /data/josiah/cell-Z8.C0.tiff: [testng] [2024-07-08 01:26:26,237] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-07-08 01:26:26,336] [pool-1-thread-8] Initializing /data/curtis/test1.tiff: [testng] [2024-07-08 01:26:26,748] [pool-1-thread-3] Initializing /data/ascb/CYT-151_Raben_Noncontractile.tif: [testng] [2024-07-08 01:26:26,840] [pool-1-thread-8] Initializing 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/data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-07-08 01:26:31,433] [pool-1-thread-7] Initializing /data/tamjid/10_para-stage 1.tiff: [testng] [2024-07-08 01:26:33,086] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-07-08 01:26:33,173] [pool-1-thread-9] Initializing /data/damian/36m.tiff: [testng] [2024-07-08 01:26:33,858] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-07-08 01:26:34,231] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-07-08 01:26:34,988] [pool-1-thread-7] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-07-08 01:26:35,599] [pool-1-thread-2] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-07-08 01:26:35,724] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-07-08 01:26:36,199] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z000.tif: [testng] [2024-07-08 01:26:36,230] [pool-1-thread-9] Initializing /data/misc/mri.eps: [testng] [2024-07-08 01:26:36,358] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0242.TIF: [testng] [2024-07-08 01:26:36,652] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-07-08 01:26:36,827] [pool-1-thread-12] Initializing /data/jae/first image.tif: [testng] [2024-07-08 01:26:38,767] [pool-1-thread-6] Initializing /data/samples/melissa/strike-uncompressed.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 43 seconds Finished: SUCCESS