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Started by upstream project "BIOFORMATS-test-repo" build number 118 originally caused by: Started by upstream project "Trigger" build number 135 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins15047344962964741367.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_18353_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:45,932 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:45,934 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:45,934 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:45,935 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:45,935 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:45,935 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:45,935 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:45,935 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:45,936 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:45,936 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:45,936 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:45,936 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:46,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:46,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:46,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:46,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:46,309 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:46,309 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:46,309 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:46,310 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:46,310 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:21:46,311 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:21:46,311 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 375 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-12 01:21:46,321] [main] java.version = 1.8.0_342 [testng] 01:21:46,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:46,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:46,373 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-12_01-21-46.log] [testng] 01:21:46,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-12 01:21:46,377] [main] testng.directory = /data [testng] [2024-07-12 01:21:46,377] [main] testng.configDirectory = /config [testng] [2024-07-12 01:21:46,389] [main] testng.multiplier = 1.0 [testng] [2024-07-12 01:21:46,389] [main] testng.in-memory = false [testng] [2024-07-12 01:21:46,389] [main] testng.allow-missing = false [testng] [2024-07-12 01:21:46,389] [main] user.language = en [testng] [2024-07-12 01:21:46,390] [main] user.country = ${user.country} [testng] [2024-07-12 01:21:46,390] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-12 01:21:55,513] [main] ---------------------------------------- [testng] [2024-07-12 01:21:55,514] [main] Total files: 4426 [testng] [2024-07-12 01:21:55,514] [main] Scan time: 9.123 s (2 ms/file) [testng] [2024-07-12 01:21:55,515] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-12 01:24:09,832] [pool-1-thread-1] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] 01:24:09,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:24:09,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:09,834 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-12_01-24-09.log] [testng] 01:24:09,834 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1407ae61 - End of configuration. [testng] [2024-07-12 01:24:09,913] [pool-1-thread-12] Initializing /data/glen/6307wmmidb4237m_cmle.tif: [testng] 01:24:09,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:24:09,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:09,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-12_01-24-09.log] [testng] 01:24:09,914 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3297edc8 - End of configuration. [testng] [2024-07-12 01:24:09,981] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z016.tif: [testng] 01:24:09,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:24:09,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:09,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-12_01-24-09.log] [testng] 01:24:09,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d51c187 - End of configuration. [testng] [2024-07-12 01:24:10,019] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] 01:24:10,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:24:10,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:10,019 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-12_01-24-10.log] [testng] 01:24:10,020 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d300a54 - End of configuration. [testng] [2024-07-12 01:24:10,042] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z018.tif: [testng] 01:24:10,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:24:10,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:10,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-12_01-24-10.log] [testng] 01:24:10,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e396691 - End of configuration. [testng] [2024-07-12 01:24:10,076] [pool-1-thread-8] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] 01:24:10,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:24:10,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:10,077 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-12_01-24-10.log] [testng] 01:24:10,078 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35678eda - End of configuration. [testng] [2024-07-12 01:24:10,140] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z057.tif: [testng] 01:24:10,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:24:10,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:10,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-12_01-24-10.log] [testng] 01:24:10,142 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5125b3f9 - End of configuration. [testng] [2024-07-12 01:24:10,165] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] 01:24:10,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:24:10,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:10,165 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-12_01-24-10.log] [testng] 01:24:10,166 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d69b241 - End of configuration. [testng] [2024-07-12 01:24:10,190] [pool-1-thread-5] Initializing /data/josiah/cell-Z31.C1.tiff: [testng] 01:24:10,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:24:10,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:10,191 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-12_01-24-10.log] [testng] 01:24:10,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cc4f488 - End of configuration. [testng] [2024-07-12 01:24:10,218] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] 01:24:10,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:24:10,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:10,218 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-12_01-24-10.log] [testng] 01:24:10,219 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7533d3ba - End of configuration. [testng] [2024-07-12 01:24:10,241] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z006.tif: [testng] 01:24:10,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:24:10,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:10,242 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-12_01-24-10.log] [testng] 01:24:10,242 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6deb05bb - End of configuration. [testng] [2024-07-12 01:24:10,269] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-64.tiff: [testng] 01:24:10,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:24:10,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:10,270 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-12_01-24-10.log] [testng] 01:24:10,270 |-INFO in ch.qos.logback.core.sift.SiftProcessor@124a3204 - End of configuration. [testng] [2024-07-12 01:24:13,696] [pool-1-thread-1] Initializing /data/josiah/cell-Z26.C0.tiff: [testng] [2024-07-12 01:24:13,734] [pool-1-thread-10] Initializing /data/paulh/quickpollen4_w4_t1.tif: [testng] [2024-07-12 01:24:13,798] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z014.tif: [testng] [2024-07-12 01:24:13,829] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-07-12 01:24:13,863] [pool-1-thread-4] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-07-12 01:24:13,898] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-07-12 01:24:13,932] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-07-12 01:24:13,978] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-07-12 01:24:14,025] [pool-1-thread-12] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-07-12 01:24:14,078] [pool-1-thread-5] Initializing /data/darwinjob/SESSION4_Image2.tif: [testng] [2024-07-12 01:24:14,123] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-07-12 01:24:14,146] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z015.tif: [testng] [2024-07-12 01:24:14,840] [pool-1-thread-9] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-07-12 01:24:14,912] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-07-12 01:24:14,942] [pool-1-thread-11] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-07-12 01:24:15,018] [pool-1-thread-4] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-07-12 01:24:15,084] [pool-1-thread-6] Initializing /data/ascb/CYT-43_HowellAcinarUnlabeled_4800.tif: [testng] [2024-07-12 01:24:15,199] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-05.tiff: [testng] [2024-07-12 01:24:15,240] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-07-12 01:24:15,337] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-07-12 01:24:15,364] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-07-12 01:24:15,638] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z030.tif: [testng] [2024-07-12 01:24:15,989] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z010.tif: [testng] [2024-07-12 01:24:16,170] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-07-12 01:24:16,291] [pool-1-thread-1] Initializing /data/josiah/cell-Z39.C1.tiff: [testng] [2024-07-12 01:24:16,325] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] [2024-07-12 01:24:16,383] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0211.TIF: [testng] [2024-07-12 01:24:16,548] [pool-1-thread-8] Initializing /data/public/condensation/C4.pattern.tif: [testng] [2024-07-12 01:24:16,955] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-07-12 01:24:17,078] [pool-1-thread-3] Initializing /data/josiah/cell-Z1.C0.tiff: [testng] [2024-07-12 01:24:17,102] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-07-12 01:24:17,145] [pool-1-thread-4] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-07-12 01:24:17,188] [pool-1-thread-5] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-07-12 01:24:18,062] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-07-12 01:24:18,115] [pool-1-thread-8] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-07-12 01:24:18,237] [pool-1-thread-1] Initializing /data/zstd-compressed/yeast.tif: [testng] [2024-07-12 01:24:18,515] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-07-12 01:24:18,762] [pool-1-thread-4] Initializing /data/josiah/cell-Z33.C0.tiff: [testng] [2024-07-12 01:24:18,792] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-07-12 01:24:18,835] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-32.tiff: [testng] [2024-07-12 01:24:18,853] [pool-1-thread-3] Initializing /data/julien/baldinsug1LMP2col.TIF: [testng] [2024-07-12 01:24:19,103] [pool-1-thread-7] Initializing /data/ascb/CYT-151_Raben_Noncontractile.tif: [testng] [2024-07-12 01:24:19,195] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-07-12 01:24:19,278] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-07-12 01:24:19,361] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-07-12 01:24:19,397] [pool-1-thread-10] Initializing /data/wayne/screen-rgb.tiff: 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[pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips_fourteen.tiff: [testng] [2024-07-12 01:26:27,522] [pool-1-thread-8] Initializing /data/bene/3d-example-stack.tif: [testng] [2024-07-12 01:26:27,750] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-07-12 01:26:27,889] [pool-1-thread-5] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-07-12 01:26:28,265] [pool-1-thread-7] Initializing /data/public/libtiff/dscf0013.tif: [testng] [2024-07-12 01:26:28,317] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0206.TIF: [testng] [2024-07-12 01:26:28,437] [pool-1-thread-8] Initializing /data/josiah/cell-Z12.C0.tiff: [testng] [2024-07-12 01:26:28,716] [pool-1-thread-5] Initializing /data/julien/MarjorieCoisy1.TIF: [testng] [2024-07-12 01:26:28,933] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-07-12 01:26:29,115] [pool-1-thread-8] Initializing 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Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-07-12 01:26:31,965] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z063.tif: [testng] [2024-07-12 01:26:33,072] [pool-1-thread-7] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-07-12 01:26:33,131] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-64.tiff: [testng] [2024-07-12 01:26:33,420] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0249.TIF: [testng] [2024-07-12 01:26:34,549] [pool-1-thread-4] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-07-12 01:26:34,787] [pool-1-thread-5] Initializing /data/curtis/blastocyste.tif: [testng] [2024-07-12 01:26:35,547] [pool-1-thread-8] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-07-12 01:26:35,936] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0238.TIF: [testng] [2024-07-12 01:26:36,086] [pool-1-thread-1] Initializing 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01:26:39,711] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] [2024-07-12 01:26:39,741] [pool-1-thread-8] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-07-12 01:26:39,823] [pool-1-thread-5] Initializing /data/misc/mri-old.mov: [testng] [2024-07-12 01:26:39,942] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z045.tif: [testng] [2024-07-12 01:26:39,967] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z029.tif: [testng] [2024-07-12 01:26:40,245] [pool-1-thread-5] Initializing /data/carolyn/tumor_4.tif: [testng] [2024-07-12 01:26:40,418] [pool-1-thread-6] Initializing /data/ascb/FND-27_PaladeGolgi_4800.tif: [testng] [2024-07-12 01:26:40,579] [pool-1-thread-8] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-07-12 01:26:40,612] [pool-1-thread-3] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-07-12 01:26:40,798] [pool-1-thread-1] Initializing /data/josiah/cell-Z19.C0.tiff: [testng] [2024-07-12 01:26:40,826] [pool-1-thread-7] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-07-12 01:26:40,871] [pool-1-thread-2] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-07-12 01:26:42,630] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] [2024-07-12 01:26:43,900] [pool-1-thread-1] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-07-12 01:26:44,253] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-07-12 01:26:44,965] [pool-1-thread-7] Initializing /data/public/condensation/C4.pattern9.tif: [testng] [2024-07-12 01:26:45,340] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z003.tif: [testng] [2024-07-12 01:26:45,410] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-07-12 01:26:45,454] [pool-1-thread-1] Initializing 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[pool-1-thread-1] Initializing /data/qa-7589/CalGrid.tif: [testng] [2024-07-12 01:26:48,515] [pool-1-thread-5] Initializing /data/damian/27m.tiff: [testng] [2024-07-12 01:26:49,060] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-07-12 01:26:49,150] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z039.tif: [testng] [2024-07-12 01:26:49,175] [pool-1-thread-8] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-07-12 01:26:49,356] [pool-1-thread-11] Initializing /data/sarah/FITC left 100% 1x mag00000.tif: [testng] [2024-07-12 01:26:49,404] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-07-12 01:26:49,482] [pool-1-thread-12] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-07-12 01:26:50,133] [pool-1-thread-9] Initializing /data/ascb/CYT-23_BaintonGlycogenB_4800.tif: [testng] [2024-07-12 01:26:52,430] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-02.tiff: [testng] [2024-07-12 01:26:52,592] [pool-1-thread-5] Initializing /data/julien/EmmanuelVignalchewingfraise.TIF: [testng] [2024-07-12 01:26:52,678] [pool-1-thread-1] Initializing /data/brian/insight.tiff: [testng] [2024-07-12 01:26:52,732] [pool-1-thread-11] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-07-12 01:26:52,959] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-07-12 01:26:53,107] [pool-1-thread-8] Initializing /data/julien/Desantabarbaraduodenum.TIF: [testng] [2024-07-12 01:26:53,582] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z030.tif: [testng] [2024-07-12 01:26:53,854] [pool-1-thread-7] Initializing /data/damian/12m.tiff: [testng] [2024-07-12 01:26:53,912] [pool-1-thread-5] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-07-12 01:26:54,324] [pool-1-thread-6] Initializing /data/big-images/4kx4k.tif: [testng] [2024-07-12 01:26:54,715] [pool-1-thread-7] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-07-12 01:26:54,931] [pool-1-thread-3] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-07-12 01:26:55,105] [pool-1-thread-8] Initializing /data/public/condensation/B12.pattern3.tif: [testng] [2024-07-12 01:26:55,867] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] [2024-07-12 01:26:56,636] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z037.tif: [testng] [2024-07-12 01:26:56,687] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-07-12 01:26:56,870] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-07-12 01:26:57,045] [pool-1-thread-8] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-07-12 01:26:57,181] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-07-12 01:26:57,805] [pool-1-thread-1] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-07-12 01:26:57,915] [pool-1-thread-8] Initializing /data/ascb/14312-p125A colocalization.tif: [testng] [2024-07-12 01:26:58,529] [pool-1-thread-3] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-07-12 01:26:59,014] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z035.tif: [testng] [2024-07-12 01:26:59,400] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-07-12 01:26:59,932] [pool-1-thread-1] Initializing /data/jayne/Zst_13/WTERZ2_Series13_z000_ch00.tif: [testng] [2024-07-12 01:27:00,847] [pool-1-thread-10] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-07-12 01:27:01,021] [pool-1-thread-5] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-07-12 01:27:01,138] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-07-12 01:27:01,518] [pool-1-thread-10] Initializing /data/pavel/Dmel/spim.pattern: [testng] [2024-07-12 01:27:02,643] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0251.TIF: [testng] [2024-07-12 01:27:02,756] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-07-12 01:27:02,881] [pool-1-thread-8] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-07-12 01:27:03,229] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x32.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 35 seconds Finished: SUCCESS