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Started by upstream project "BIOFORMATS-test-repo" build number 118 originally caused by: Started by upstream project "Trigger" build number 135 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins1401418453667342892.sh + '[' fei = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_18369_merge_ci -v /uod/idr/repos/curated/fei:/data -v /uod/idr-scratch/merge-ci/curated/fei:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:25:45,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:25:45,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:25:45,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:25:45,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:25:45,616 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:25:45,617 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:25:45,617 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:25:45,618 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:25:45,618 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:25:45,619 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:25:45,619 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 393 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-12 01:25:45,642] [main] java.version = 1.8.0_342 [testng] 01:25:45,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:25:45,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:45,711 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-12_01-25-45.log] [testng] 01:25:45,713 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-12 01:25:45,715] [main] testng.directory = /data [testng] [2024-07-12 01:25:45,716] [main] testng.configDirectory = /config [testng] [2024-07-12 01:25:45,730] [main] testng.multiplier = 1.0 [testng] [2024-07-12 01:25:45,730] [main] testng.in-memory = false [testng] [2024-07-12 01:25:45,730] [main] testng.allow-missing = false [testng] [2024-07-12 01:25:45,730] [main] user.language = en [testng] [2024-07-12 01:25:45,730] [main] user.country = ${user.country} [testng] [2024-07-12 01:25:45,731] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-12 01:25:47,176] [main] ---------------------------------------- [testng] [2024-07-12 01:25:47,176] [main] Total files: 21 [testng] [2024-07-12 01:25:47,176] [main] Scan time: 1.445 s (68 ms/file) [testng] [2024-07-12 01:25:47,177] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-12 01:25:49,906] [pool-1-thread-1] Initializing /data/peter/ZC_PTCS_ED_1000x_002.tif: [testng] 01:25:49,907 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:25:49,907 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:49,908 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-12_01-25-49.log] [testng] 01:25:49,908 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59f9f346 - End of configuration. [testng] [2024-07-12 01:25:49,959] [pool-1-thread-12] Initializing /data/venu/VENU_Six.TIF: [testng] 01:25:49,960 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:25:49,960 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:49,961 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-12_01-25-49.log] [testng] 01:25:49,961 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49e0afe4 - End of configuration. [testng] [2024-07-12 01:25:49,993] [pool-1-thread-11] Initializing /data/antoine/Tile_001-002-000_0-000.tif: [testng] 01:25:49,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:25:49,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:49,994 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-12_01-25-49.log] [testng] 01:25:49,995 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a7dfd30 - End of configuration. [testng] [2024-07-12 01:25:50,051] [pool-1-thread-10] Initializing /data/venu/VENU_Seven.TIF: [testng] 01:25:50,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:25:50,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:50,052 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-12_01-25-50.log] [testng] 01:25:50,053 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5543809a - End of configuration. [testng] [2024-07-12 01:25:50,080] [pool-1-thread-9] Initializing /data/qa-11061/Tile_020-009-000_0.tif: [testng] 01:25:50,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:25:50,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:50,081 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-12_01-25-50.log] [testng] 01:25:50,082 |-INFO in ch.qos.logback.core.sift.SiftProcessor@260d9797 - End of configuration. [testng] [2024-07-12 01:25:50,133] [pool-1-thread-8] Initializing /data/venu/VENU03.TIF: [testng] 01:25:50,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:25:50,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:50,134 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-12_01-25-50.log] [testng] 01:25:50,134 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4eb1927e - End of configuration. [testng] [2024-07-12 01:25:50,183] [pool-1-thread-7] Initializing /data/qa-4264/08.51.17 CCD Acquire-Acquire CCD Image Display-Acquire CCD -0.tif: [testng] 01:25:50,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:25:50,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:50,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-12_01-25-50.log] [testng] 01:25:50,184 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3337ffcd - End of configuration. [testng] [2024-07-12 01:25:50,310] [pool-1-thread-6] Initializing /data/venu/VENU01.TIF: [testng] 01:25:50,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:25:50,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:50,311 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-12_01-25-50.log] [testng] 01:25:50,311 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3886f570 - End of configuration. [testng] [2024-07-12 01:25:50,370] [pool-1-thread-5] Initializing /data/venu/VENU03.IMG: [testng] 01:25:50,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:25:50,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:50,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-12_01-25-50.log] [testng] 01:25:50,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cbba92e - End of configuration. [testng] [2024-07-12 01:25:50,395] [pool-1-thread-4] Initializing /data/venu/VENU.TIF: [testng] 01:25:50,396 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:25:50,396 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:50,397 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-12_01-25-50.log] [testng] 01:25:50,397 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b5c5ec6 - End of configuration. [testng] [2024-07-12 01:25:50,431] [pool-1-thread-3] Initializing /data/qa-10514/TITAN_FEI_TIFF_Test_Image.tif: [testng] 01:25:50,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:25:50,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:50,433 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-12_01-25-50.log] [testng] 01:25:50,434 |-INFO in ch.qos.logback.core.sift.SiftProcessor@278cabad - End of configuration. [testng] [2024-07-12 01:25:50,475] [pool-1-thread-2] Initializing /data/venu/VENU_Four.TIF: [testng] 01:25:50,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:25:50,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:50,476 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-12_01-25-50.log] [testng] 01:25:50,477 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4464067 - End of configuration. [testng] [2024-07-12 01:25:52,671] [pool-1-thread-3] Initializing /data/steffen/Batman_008.tif: [testng] [2024-07-12 01:25:52,703] [pool-1-thread-4] Initializing /data/venu/VENU02.IMG: [testng] [2024-07-12 01:25:52,722] [pool-1-thread-5] Initializing /data/venu/VENU_Eight.TIF: [testng] [2024-07-12 01:25:52,749] [pool-1-thread-1] Initializing /data/venu/VENU02.TIF: [testng] [2024-07-12 01:25:52,782] [pool-1-thread-6] Initializing /data/venu/VENU_Five.TIF: [testng] [2024-07-12 01:25:52,810] [pool-1-thread-8] Initializing /data/venu/VENU01.IMG: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 12 seconds Finished: SUCCESS