![[Jenkins]](/jenkins/static/b864b239/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 12 originally caused by: Started by upstream project "Trigger" build number 15 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins1982939017691090353.sh + '[' micromanager = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_1862_merge_ci -v /uod/idr/repos/curated/micromanager:/data -v /uod/idr-scratch/merge-ci/curated/micromanager:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:16:33,089 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:16:33,091 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:16:33,091 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:16:33,092 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:16:33,093 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:16:33,093 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:16:33,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:16:33,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:16:33,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:16:33,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:16:33,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:16:33,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:16:33,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:16:33,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:16:33,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:16:33,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:16:33,313 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:16:33,313 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:16:33,313 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:16:33,314 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:16:33,314 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:16:33,315 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:16:33,315 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 221 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-26 01:16:33,325] [main] java.version = 11.0.16 [testng] 01:16:33,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:16:33,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:16:33,379 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-26_01-16-33.log] [testng] 01:16:33,380 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-03-26 01:16:33,383] [main] testng.directory = /data [testng] [2024-03-26 01:16:33,383] [main] testng.configDirectory = /config [testng] [2024-03-26 01:16:33,394] [main] testng.multiplier = 1.0 [testng] [2024-03-26 01:16:33,395] [main] testng.in-memory = false [testng] [2024-03-26 01:16:33,395] [main] testng.allow-missing = false [testng] [2024-03-26 01:16:33,395] [main] user.language = en [testng] [2024-03-26 01:16:33,395] [main] user.country = ${user.country} [testng] [2024-03-26 01:16:33,396] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-03-26 01:16:48,689] [main] ---------------------------------------- [testng] [2024-03-26 01:16:48,690] [main] Total files: 1686 [testng] [2024-03-26 01:16:48,690] [main] Scan time: 15.293 s (9 ms/file) [testng] [2024-03-26 01:16:48,690] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 49 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-26 01:21:56,458] [pool-1-thread-1] Initializing /data/public/1.4.22/thomas/test/test_stack/test_stack_MMStack_Pos0_metadata.txt: [testng] 01:21:56,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:56,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:56,462 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-26_01-21-56.log] [testng] 01:21:56,463 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6826928a - End of configuration. [testng] [2024-03-26 01:21:56,605] [pool-1-thread-12] Initializing /data/eric/GFP-Aladin mCh-Tub_5/Acqusition.xml: [testng] 01:21:56,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:56,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:56,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-26_01-21-56.log] [testng] 01:21:56,606 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b1ef1d3 - End of configuration. [testng] [2024-03-26 01:21:57,889] [pool-1-thread-11] Initializing /data/public/1.4.22/sebastien/Test_Dataset_MultiPosition_Stack_1_MMStack_Pos0_metadata.txt: [testng] 01:21:57,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:57,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:57,890 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-26_01-21-57.log] [testng] 01:21:57,890 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c59a367 - End of configuration. [testng] [2024-03-26 01:22:15,738] [pool-1-thread-10] Initializing /data/nico/test2/img_000000000_Cy5_000.tif: [testng] 01:22:15,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:22:15,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:15,739 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-26_01-22-15.log] [testng] 01:22:15,740 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b3ea516 - End of configuration. [testng] [2024-03-26 01:22:16,320] [pool-1-thread-9] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_006.tif: [testng] 01:22:16,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:22:16,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:16,321 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-26_01-22-16.log] [testng] 01:22:16,321 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7aaebaa6 - End of configuration. [testng] [2024-03-26 01:22:17,058] [pool-1-thread-9] Used files list does not include base file [testng] [2024-03-26 01:22:17,061] [pool-1-thread-8] Initializing /data/public/1.4.16/serge/Pos4/img_000000000_00-BF0_000.tif: [testng] 01:22:17,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:22:17,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,062 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-26_01-22-17.log] [testng] 01:22:17,062 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2234bc1e - End of configuration. [testng] [2024-03-26 01:22:17,517] [pool-1-thread-7] Initializing /data/nico/test_1/Acqusition.xml: [testng] 01:22:17,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:22:17,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,518 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-26_01-22-17.log] [testng] 01:22:17,518 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f462e91 - End of configuration. [testng] [2024-03-26 01:22:18,187] [pool-1-thread-6] Initializing /data/public/1.4.22/thomas/test/test_sep/Pos0/img_000000000_FITC_000.tif: [testng] 01:22:18,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:22:18,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:18,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-26_01-22-18.log] [testng] 01:22:18,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45caff0c - End of configuration. [testng] [2024-03-26 01:22:18,318] [pool-1-thread-5] Initializing /data/public/1.4.23/jens/fucci_GFP-geminin_RFP-cdt1_2_MMStack_Pos0_metadata.txt: [testng] 01:22:18,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:22:18,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:18,319 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-26_01-22-18.log] [testng] 01:22:18,319 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c546871 - End of configuration. [testng] [2024-03-26 01:22:18,982] [pool-1-thread-4] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_009.tif: [testng] 01:22:18,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:22:18,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:18,983 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-26_01-22-18.log] [testng] 01:22:18,984 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16df17f5 - End of configuration. [testng] [2024-03-26 01:22:19,393] [pool-1-thread-4] Used files list does not include base file [testng] [2024-03-26 01:22:19,395] [pool-1-thread-3] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_009.tif: [testng] 01:22:19,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:22:19,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:19,396 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-26_01-22-19.log] [testng] 01:22:19,396 |-INFO in ch.qos.logback.core.sift.SiftProcessor@293cd170 - End of configuration. [testng] [2024-03-26 01:22:19,675] [pool-1-thread-3] Used files list does not include base file [testng] [2024-03-26 01:22:19,677] [pool-1-thread-2] Initializing /data/nico/Untitled_4_multi_file/img_000000000_gfpFast_000.tif: [testng] 01:22:19,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:22:19,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:19,678 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-26_01-22-19.log] [testng] 01:22:19,678 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34ac2f6e - End of configuration. [testng] [2024-03-26 01:22:25,372] [pool-1-thread-1] Initializing /data/public/1.4.22/thomas/test/test2_sep/Pos0/metadata.txt: [testng] [2024-03-26 01:22:26,984] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:22:26,998] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:22:28,106] [pool-1-thread-10] Initializing /data/pr-3229/1.4-large-acq-take-2_1_MMStack_Pos0_metadata.txt: [testng] [2024-03-26 01:25:40,914] [pool-1-thread-6] Initializing /data/nico/S2-GFP-Histone-Cherry-tub_9_Great2/metadata.txt: [testng] [2024-03-26 01:25:51,781] [pool-1-thread-5] Initializing /data/pr-3253/img_000000000__000.tif: [testng] [2024-03-26 01:25:53,824] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:25:54,053] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:25:54,350] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:25:55,649] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:25:55,663] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:25:55,669] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:25:56,720] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:25:57,432] [pool-1-thread-7] Initializing /data/david/res test/res test.tif: [testng] [2024-03-26 01:25:58,444] [pool-1-thread-1] Initializing /data/scott/EMonslicefurst2Time_0/img_000000000_491_000.tif: [testng] [2024-03-26 01:25:59,626] [pool-1-thread-8] Initializing /data/eric/GFP-Aladin mCh-Tub_3/Acqusition.xml: [testng] [2024-03-26 01:26:00,782] [pool-1-thread-2] Initializing /data/nico/MM_test_0/img_0_Cy5_0.tif: [testng] [2024-03-26 01:26:01,756] [pool-1-thread-5] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_001_001_metadata.txt: [testng] [2024-03-26 01:26:04,400] [pool-1-thread-9] Initializing /data/stanislav/s105-GFP-_0/img_000000000_GFP_000.tif: [testng] [2024-03-26 01:26:05,321] [pool-1-thread-4] Initializing /data/eik/1-Pos_000_000/img_000000000_Blue_002.tif: [testng] [2024-03-26 01:26:06,455] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:26:06,501] [pool-1-thread-7] Initializing /data/public/1.4.16/serge/Pos1/img_000000000_00-BF0_000.tif: [testng] [2024-03-26 01:26:08,066] [pool-1-thread-3] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_006.tif: [testng] [2024-03-26 01:26:09,750] [pool-1-thread-3] Used files list does not include base file [testng] [2024-03-26 01:26:12,686] [pool-1-thread-5] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_000_001_metadata.txt: [testng] [2024-03-26 01:26:17,358] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:26:18,730] [pool-1-thread-5] Initializing /data/eric/GFP-Aladin mCh-Tub_1/Acqusition.xml: [testng] [2024-03-26 01:26:19,492] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:26:19,900] [pool-1-thread-1] Initializing /data/qa-4984/img_000000000__000.tif: [testng] [2024-03-26 01:26:23,333] [pool-1-thread-2] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_008.tif: [testng] [2024-03-26 01:26:24,836] [pool-1-thread-2] Used files list does not include base file [testng] [2024-03-26 01:26:26,876] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:26:28,404] [pool-1-thread-1] Initializing /data/public/1.4.16/serge/Pos3/img_000000000_00-BF0_000.tif: [testng] [2024-03-26 01:26:32,902] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:26:34,030] [pool-1-thread-12] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_007.tif: [testng] [2024-03-26 01:26:35,915] [pool-1-thread-12] Used files list does not include base file [testng] [2024-03-26 01:26:35,916] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:26:38,619] [pool-1-thread-4] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_008.tif: [testng] [2024-03-26 01:26:40,317] [pool-1-thread-4] Used files list does not include base file [testng] [2024-03-26 01:26:40,318] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:26:40,338] [pool-1-thread-9] Initializing /data/eric/GFP-Aladin mCh-Tub_2/Acqusition.xml: [testng] [2024-03-26 01:26:43,853] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:26:46,272] [pool-1-thread-7] Initializing /data/eric/GFP-Aladin mCh-Tub_0/Acqusition.xml: [testng] [2024-03-26 01:26:51,732] [pool-1-thread-8] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_007.tif: [testng] [2024-03-26 01:26:53,288] [pool-1-thread-8] Used files list does not include base file [testng] [2024-03-26 01:26:53,289] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:26:57,157] [pool-1-thread-5] Initializing /data/scott/EMoffchanfurst2Time_0/img_000000000_491_000.tif: [testng] [2024-03-26 01:27:03,541] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:27:08,471] [pool-1-thread-1] Initializing /data/eric/GFP-Aladin mCh-Tub_4/Acqusition.xml: [testng] [2024-03-26 01:27:25,203] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:27:25,781] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:27:27,534] [pool-1-thread-5] Initializing /data/public/1.4.22/thomas/test/test2_stack/MMStack_Pos0_metadata.txt: [testng] [2024-03-26 01:27:29,683] [pool-1-thread-9] Initializing /data/scott/EMoffslicefurst2Time_0/img_000000000_491_000.tif: [testng] [2024-03-26 01:27:33,849] [pool-1-thread-5] Initializing /data/colin/20121205_H_rel_3c_0nm_1/img_000000000_Cy5_000.tif: [testng] [2024-03-26 01:27:40,817] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:27:42,325] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:27:47,626] [pool-1-thread-7] Initializing /data/david/trial 2 part 3 40x_0/Acqusition.xml: [testng] [2024-03-26 01:27:48,908] [pool-1-thread-3] Initializing /data/public/1.4.16/serge/Pos0/img_000000000_00-BF0_000.tif: [testng] [2024-03-26 01:27:50,959] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:27:53,307] [pool-1-thread-9] Initializing /data/david/img_000000000_white_000.tif: [testng] [2024-03-26 01:27:56,349] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:28:03,027] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:28:05,294] [pool-1-thread-2] Initializing /data/public/1.4.16/serge/Pos2/img_000000000_00-BF0_000.tif: [testng] [2024-03-26 01:28:07,688] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:28:07,689] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:28:11,338] [pool-1-thread-7] Initializing /data/scott/EMonchanfurst2Time_0/img_000000000_491_000.tif: [testng] [2024-03-26 01:28:13,553] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:28:15,355] [pool-1-thread-9] Initializing /data/kally/img_000000000_Brightfield_000.tif: [testng] [2024-03-26 01:28:18,883] [pool-1-thread-12] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_001_000_metadata.txt: [testng] [2024-03-26 01:28:24,311] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:28:24,546] [pool-1-thread-11] Initializing /data/public/1.4.16/serge/Pos5/img_000000000_00-BF0_000.tif: [testng] [2024-03-26 01:28:26,907] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:28:26,976] [pool-1-thread-4] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_000_000_metadata.txt: [testng] [2024-03-26 01:28:33,836] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:28:39,812] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:28:53,287] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:29:03,627] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:29:13,415] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:31:30,548] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 2597, Failures: 37, Skips: 0 [testng] =============================================== [testng] [testng] The tests failed. BUILD FAILED /bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest Total time: 36 minutes 52 seconds Build step 'Execute shell' marked build as failure Finished: FAILURE