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Started by upstream project "BIOFORMATS-test-repo" build number 120 originally caused by: Started by upstream project "Trigger" build number 137 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins988712480491026576.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_18680_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:20:28,101 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:28,103 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:20:28,103 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:28,105 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:28,105 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:28,106 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:28,106 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:28,106 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:28,107 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:28,107 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:28,108 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:28,108 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:28,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:28,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:28,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:28,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:28,366 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:28,366 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:28,366 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:28,366 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:28,367 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:20:28,368 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:20:28,368 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 261 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-14 01:20:28,380] [main] java.version = 17.0.2 [testng] 01:20:28,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:28,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:28,436 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-14_01-20-28.log] [testng] 01:20:28,438 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-07-14 01:20:28,440] [main] testng.directory = /data [testng] [2024-07-14 01:20:28,440] [main] testng.configDirectory = /config [testng] [2024-07-14 01:20:28,449] [main] testng.multiplier = 1.0 [testng] [2024-07-14 01:20:28,450] [main] testng.in-memory = false [testng] [2024-07-14 01:20:28,451] [main] testng.allow-missing = false [testng] [2024-07-14 01:20:28,451] [main] user.language = en [testng] [2024-07-14 01:20:28,451] [main] user.country = ${user.country} [testng] [2024-07-14 01:20:28,451] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-14 01:20:44,843] [main] ---------------------------------------- [testng] [2024-07-14 01:20:44,843] [main] Total files: 283 [testng] [2024-07-14 01:20:44,843] [main] Scan time: 16.392 s (57 ms/file) [testng] [2024-07-14 01:20:44,844] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-14 01:28:56,215] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:28:56,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:28:56,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:56,217 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-14_01-28-56.log] [testng] 01:28:56,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f8bc963 - End of configuration. [testng] [2024-07-14 01:28:56,261] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] 01:28:56,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:28:56,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:56,262 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-14_01-28-56.log] [testng] 01:28:56,262 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eea36a3 - End of configuration. [testng] [2024-07-14 01:28:56,344] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] 01:28:56,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:28:56,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:56,345 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-14_01-28-56.log] [testng] 01:28:56,346 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f807767 - End of configuration. [testng] [2024-07-14 01:28:56,415] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] 01:28:56,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:28:56,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:56,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-14_01-28-56.log] [testng] 01:28:56,416 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cff0c00 - End of configuration. [testng] [2024-07-14 01:28:56,499] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] 01:28:56,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:28:56,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:56,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-14_01-28-56.log] [testng] 01:28:56,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70b333e5 - End of configuration. [testng] [2024-07-14 01:28:56,619] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir: [testng] 01:28:56,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:28:56,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:56,621 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-14_01-28-56.log] [testng] 01:28:56,622 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6353302f - End of configuration. [testng] [2024-07-14 01:28:56,684] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: [testng] 01:28:56,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:28:56,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:56,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-14_01-28-56.log] [testng] 01:28:56,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9438714 - End of configuration. [testng] [2024-07-14 01:29:12,138] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] 01:29:12,139 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:29:12,139 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:12,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-14_01-29-12.log] [testng] 01:29:12,142 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17a69ffc - End of configuration. [testng] [2024-07-14 01:29:12,198] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:29:12,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:29:12,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:12,200 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-14_01-29-12.log] [testng] 01:29:12,200 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7366bbfe - End of configuration. [testng] [2024-07-14 01:29:12,227] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] 01:29:12,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:29:12,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:12,228 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-14_01-29-12.log] [testng] 01:29:12,229 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78c31ac6 - End of configuration. [testng] [2024-07-14 01:29:12,302] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] 01:29:12,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:29:12,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:12,304 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-14_01-29-12.log] [testng] 01:29:12,304 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ae10945 - End of configuration. [testng] [2024-07-14 01:29:12,356] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] 01:29:12,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:29:12,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:12,357 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-14_01-29-12.log] [testng] 01:29:12,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22c17a91 - End of configuration. [testng] [2024-07-14 01:29:15,104] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-07-14 01:29:15,354] [pool-1-thread-8] Initializing /data/qa-17270/stack1.oir: [testng] [2024-07-14 01:29:16,817] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-07-14 01:29:16,976] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-07-14 01:29:17,363] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-07-14 01:29:17,427] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-07-14 01:29:17,472] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-07-14 01:29:17,497] [pool-1-thread-2] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-07-14 01:29:17,575] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-07-14 01:29:17,632] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-07-14 01:29:18,317] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: [testng] [2024-07-14 01:29:19,809] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-07-14 01:29:19,913] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-07-14 01:29:20,156] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-07-14 01:29:20,259] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-07-14 01:29:20,541] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-07-14 01:29:20,665] [pool-1-thread-10] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-07-14 01:30:11,516] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-07-14 01:30:11,623] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-07-14 01:30:12,192] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-07-14 01:30:12,345] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-07-14 01:30:12,756] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-07-14 01:30:12,808] [pool-1-thread-11] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-07-14 01:30:12,972] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2024-07-14 01:30:13,025] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2024-07-14 01:30:13,067] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-07-14 01:30:13,287] [pool-1-thread-1] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-07-14 01:30:17,623] [pool-1-thread-4] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-07-14 01:30:18,328] [pool-1-thread-6] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-07-14 01:30:18,443] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-07-14 01:30:18,593] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-07-14 01:30:18,988] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-07-14 01:30:19,048] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2024-07-14 01:30:20,371] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-07-14 01:30:20,561] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-07-14 01:30:21,103] [pool-1-thread-4] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-07-14 01:30:21,239] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-07-14 01:30:21,527] [pool-1-thread-2] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-07-14 01:30:22,057] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-07-14 01:30:22,267] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-07-14 01:30:22,478] [pool-1-thread-9] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-07-14 01:30:23,125] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-07-14 01:30:23,404] [pool-1-thread-4] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-07-14 01:30:23,457] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-07-14 01:30:24,069] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-07-14 01:30:24,118] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-07-14 01:30:24,431] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-07-14 01:30:24,538] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-07-14 01:30:24,687] [pool-1-thread-5] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-07-14 01:30:25,035] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-07-14 01:30:25,286] [pool-1-thread-9] Initializing 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01:30:56,479] [pool-1-thread-2] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-07-14 01:30:57,365] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2024-07-14 01:30:57,449] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-07-14 01:30:57,781] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-07-14 01:30:57,807] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-07-14 01:30:58,217] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-07-14 01:30:58,380] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-07-14 01:30:59,228] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-07-14 01:30:59,641] [pool-1-thread-9] Initializing 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01:31:01,916] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-07-14 01:31:02,210] [pool-1-thread-2] Initializing /data/olympus/XYZt.oir: [testng] [2024-07-14 01:31:03,550] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2024-07-14 01:31:04,075] [pool-1-thread-9] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-07-14 01:31:04,262] [pool-1-thread-11] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-07-14 01:31:05,231] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-07-14 01:31:05,404] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-07-14 01:31:05,640] [pool-1-thread-9] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-07-14 01:31:25,922] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-07-14 01:31:29,562] [pool-1-thread-4] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-07-14 01:31:30,025] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-07-14 01:31:30,329] [pool-1-thread-1] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-07-14 01:31:30,717] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-07-14 01:31:30,808] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-07-14 01:31:31,601] [pool-1-thread-4] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-07-14 01:31:31,758] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-07-14 01:31:31,995] [pool-1-thread-1] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-07-14 01:31:32,221] [pool-1-thread-11] Initializing 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[pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-07-14 01:31:35,937] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2024-07-14 01:31:36,737] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-07-14 01:31:37,284] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-07-14 01:31:37,342] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-07-14 01:31:37,502] [pool-1-thread-4] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-07-14 01:31:37,920] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-07-14 01:31:38,457] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-07-14 01:31:38,859] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2024-07-14 01:31:39,097] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-07-14 01:31:39,246] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-07-14 01:31:39,359] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2024-07-14 01:31:39,566] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-07-14 01:31:40,042] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-07-14 01:31:40,196] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2024-07-14 01:31:40,663] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] 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01:31:52,740] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-07-14 01:31:52,904] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-07-14 01:31:53,635] [pool-1-thread-2] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-07-14 01:31:54,001] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-07-14 01:31:54,229] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-07-14 01:31:54,412] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-07-14 01:31:55,233] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-07-14 01:31:55,475] [pool-1-thread-3] Initializing 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Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-07-14 01:32:01,100] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-07-14 01:32:03,970] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-07-14 01:32:05,737] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-07-14 01:32:05,848] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-07-14 01:32:06,696] [pool-1-thread-2] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-07-14 01:32:07,611] [pool-1-thread-6] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-07-14 01:32:08,081] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2024-07-14 01:32:08,229] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-07-14 01:32:09,664] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-07-14 01:32:09,917] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-07-14 01:32:10,660] [pool-1-thread-6] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-07-14 01:32:11,167] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-07-14 01:32:12,016] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-07-14 01:32:12,696] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 43 minutes 8 seconds Finished: SUCCESS