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Started by upstream project "BIOFORMATS-test-repo" build number 12 originally caused by: Started by upstream project "Trigger" build number 15 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins14263129078826808308.sh + '[' cellsens = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_1895_merge_ci -v /uod/idr/repos/curated/cellsens:/data -v /uod/idr-scratch/merge-ci/curated/cellsens:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:43:37,125 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:43:37,127 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:43:37,127 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:43:37,128 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:43:37,128 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:43:37,128 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:43:37,129 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:43:37,129 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:43:37,129 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:43:37,130 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:43:37,130 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:43:37,131 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:43:37,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:43:37,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:43:37,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:43:37,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:43:37,343 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:43:37,343 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:43:37,343 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:43:37,344 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:43:37,344 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:43:37,345 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:43:37,345 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 216 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-26 01:43:37,355] [main] java.version = 11.0.16 [testng] 01:43:37,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:43:37,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:43:37,404 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-26_01-43-37.log] [testng] 01:43:37,406 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-03-26 01:43:37,408] [main] testng.directory = /data [testng] [2024-03-26 01:43:37,409] [main] testng.configDirectory = /config [testng] [2024-03-26 01:43:37,420] [main] testng.multiplier = 1.0 [testng] [2024-03-26 01:43:37,421] [main] testng.in-memory = false [testng] [2024-03-26 01:43:37,421] [main] testng.allow-missing = false [testng] [2024-03-26 01:43:37,421] [main] user.language = en [testng] [2024-03-26 01:43:37,421] [main] user.country = ${user.country} [testng] [2024-03-26 01:43:37,421] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-03-26 01:45:57,056] [main] ---------------------------------------- [testng] [2024-03-26 01:45:57,056] [main] Total files: 134 [testng] [2024-03-26 01:45:57,056] [main] Scan time: 139.634 s (1042 ms/file) [testng] [2024-03-26 01:45:57,056] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 72 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-26 01:46:27,457] [pool-1-thread-1] Initializing /data/samples/Fluorescence/drehung.avi: [testng] 01:46:27,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:46:27,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:27,460 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-26_01-46-27.log] [testng] 01:46:27,460 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6daf173d - End of configuration. [testng] [2024-03-26 01:46:27,543] [pool-1-thread-12] Initializing /data/samples/Shading Correction/Micrometer Original.tif: [testng] 01:46:27,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:46:27,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:27,544 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-26_01-46-27.log] [testng] 01:46:27,545 |-INFO in ch.qos.logback.core.sift.SiftProcessor@748f2904 - End of configuration. [testng] [2024-03-26 01:46:27,805] [pool-1-thread-11] Initializing /data/johannes/PSF_green_1.vsi: [testng] 01:46:27,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:46:27,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:27,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-26_01-46-27.log] [testng] 01:46:27,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32c2c412 - End of configuration. [testng] [2024-03-26 01:46:27,963] [pool-1-thread-10] Initializing /data/alex/pN1_new.vsi: [testng] 01:46:27,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:46:27,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:27,964 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-26_01-46-27.log] [testng] 01:46:27,965 |-INFO in ch.qos.logback.core.sift.SiftProcessor@653b4893 - End of configuration. [testng] [2024-03-26 01:46:28,117] [pool-1-thread-9] Initializing /data/samples/Deconvolution/Gut section raw.vsi: [testng] 01:46:28,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:46:28,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:28,118 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-26_01-46-28.log] [testng] 01:46:28,119 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7317cfc0 - End of configuration. [testng] [2024-03-26 01:46:28,326] [pool-1-thread-8] Initializing /data/samples/Channels/svens cells - green.tif: [testng] 01:46:28,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:46:28,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:28,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-26_01-46-28.log] [testng] 01:46:28,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52bc89e8 - End of configuration. [testng] [2024-03-26 01:46:28,772] [pool-1-thread-7] Initializing /data/samples/Channels/svens cells - DIC.tif: [testng] 01:46:28,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:46:28,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:28,773 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-26_01-46-28.log] [testng] 01:46:28,773 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6662694c - End of configuration. [testng] [2024-03-26 01:46:29,410] [pool-1-thread-6] Initializing /data/david/smithd_20111115_1.vsi: [testng] 01:46:29,411 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:46:29,411 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:29,412 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-26_01-46-29.log] [testng] 01:46:29,412 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45a1127b - End of configuration. [testng] [2024-03-26 01:46:29,707] [pool-1-thread-5] Initializing /data/public/evident/Image_V4.1_BF.vsi: [testng] 01:46:29,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:46:29,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:29,708 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-26_01-46-29.log] [testng] 01:46:29,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@145f9a40 - End of configuration. [testng] [2024-03-26 01:46:29,963] [pool-1-thread-4] Initializing /data/qa-11039/Image_01.vsi: [testng] 01:46:29,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:46:29,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:29,964 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-26_01-46-29.log] [testng] 01:46:29,964 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61f711e8 - End of configuration. [testng] [2024-03-26 01:46:30,216] [pool-1-thread-3] Initializing /data/alex/test.vsi: [testng] 01:46:30,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:46:30,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:30,217 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-26_01-46-30.log] [testng] 01:46:30,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@88d4a67 - End of configuration. [testng] [2024-03-26 01:46:30,502] [pool-1-thread-2] Initializing /data/public/evident/Image_V4.1_FL_2D.vsi: [testng] 01:46:30,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:46:30,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:46:30,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-26_01-46-30.log] [testng] 01:46:30,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33cbd26e - End of configuration. [testng] [2024-03-26 01:46:32,536] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:46:32,819] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:46:33,121] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:46:33,144] [pool-1-thread-1] Initializing /data/qa-29751/VSI-import-example-file.vsi: [testng] [2024-03-26 01:46:34,174] [pool-1-thread-9] Initializing /data/david/Image_normal_skin with hair/Image_normal_skin with hair.vsi: [testng] [2024-03-26 01:46:34,682] [pool-1-thread-11] Initializing /data/samples/Deconvolution/Silver birch raw.vsi: [testng] [2024-03-26 01:46:35,063] [pool-1-thread-3] Initializing /data/qa-11394/f1 lateral 25hpf yen4 20X timelapse.vsi: [testng] [2024-03-26 01:46:35,355] [pool-1-thread-8] Initializing /data/samples/Fluorescence Unmixing/HeLa_YFP_only.tif: [testng] [2024-03-26 01:46:35,932] [pool-1-thread-12] Initializing /data/brian/Image_28.vsi: [testng] [2024-03-26 01:46:36,287] [pool-1-thread-7] Initializing /data/samples/Image SHOW/HER2_FISH Assay.tif: [testng] [2024-03-26 01:46:37,977] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:46:38,406] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:46:38,807] [pool-1-thread-11] Initializing /data/samples/Measurement & ROI/Snake.tif: [testng] [2024-03-26 01:46:39,862] [pool-1-thread-3] Initializing /data/michelle/FC(26)-19 Gadd45b 1hr_20121011_01.vsi: [testng] [2024-03-26 01:46:40,207] [pool-1-thread-8] Initializing /data/samples/Channels/svens cells - red.tif: [testng] [2024-03-26 01:46:40,981] [pool-1-thread-7] Initializing /data/samples/Deconvolution/Skin 2.tif: [testng] [2024-03-26 01:46:42,744] [pool-1-thread-11] Initializing /data/samples/Deconvolution/_chroma liver 40x 8 planes_/stack1/frame_t_0.ets: [testng] [2024-03-26 01:46:43,988] [pool-1-thread-8] Initializing /data/anthony/11R1398A1.vsi: [testng] [2024-03-26 01:46:44,279] [pool-1-thread-7] Initializing /data/brian/SW10082402-02_21.vsi: [testng] [2024-03-26 01:46:45,994] [pool-1-thread-11] Initializing /data/gh-3822/image.jp2: [testng] [2024-03-26 01:46:49,312] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:46:52,720] [pool-1-thread-11] Initializing /data/samples/Channels/svens cells - blue.tif: [testng] [2024-03-26 01:46:55,539] [pool-1-thread-11] Initializing /data/gh-3822/_image_/stack1/frame_t_0.ets: [testng] [2024-03-26 01:46:59,836] [pool-1-thread-10] Initializing /data/olivier/Stress47_02.vsi: [testng] [2024-03-26 01:47:15,997] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:47:19,713] [pool-1-thread-11] Initializing /data/melissa/artificial-vsi/Image_V4.1_BF.vsi: [testng] [2024-03-26 01:47:19,925] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:47:20,667] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:47:33,274] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:47:35,760] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:47:38,121] [pool-1-thread-9] Initializing /data/samples/Fluorescence Unmixing/HeLa_original.tif: [testng] [2024-03-26 01:47:39,293] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:47:41,555] [pool-1-thread-9] Initializing /data/olivier/26-10-2014/Image_27.vsi: [testng] [2024-03-26 01:47:52,696] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:48:08,704] [pool-1-thread-7] Initializing /data/olivier/26-10-2014/Image_27_2.vsi: [testng] [2024-03-26 01:48:10,977] [pool-1-thread-6] Initializing /data/qa-18870/Image_T30.vsi: [testng] [2024-03-26 01:48:19,904] [pool-1-thread-10] Initializing /data/melissa/SW10082402-02_21 - cy2 - cy5 copy.vsi: [testng] [2024-03-26 01:48:23,687] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:48:37,581] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:48:38,792] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:48:44,173] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:48:49,010] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:48:51,092] [pool-1-thread-5] Initializing /data/samples/Deconvolution/_islets_40X_2_/_islets_40X_2_/stack1/frame_t_0.ets: [testng] [2024-03-26 01:48:54,070] [pool-1-thread-5] Initializing /data/olivier/26-10-2014/Image_06.vsi: [testng] [2024-03-26 01:49:13,767] [pool-1-thread-1] Initializing /data/melissa/SW10082402-02_21 - 1 - GOLD copy.vsi: [testng] [2024-03-26 01:49:14,746] [pool-1-thread-10] Initializing /data/samples/Colocalisation/Daisy_Coloc.vsi: [testng] [2024-03-26 01:49:14,898] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:49:15,804] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:49:16,342] [pool-1-thread-10] Initializing /data/samples/Fluorescence/Plant FL 100x 29 Z CI Decon2.vsi: [testng] [2024-03-26 01:49:17,222] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:49:17,858] [pool-1-thread-10] Initializing /data/gh-3819/H30-18-endo-sost-40x.vsi: [testng] [2024-03-26 01:49:23,687] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:49:27,984] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:49:32,025] [pool-1-thread-10] Initializing /data/olivier/14-09-2012/Image_07.vsi: [testng] [2024-03-26 01:49:32,263] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:49:34,868] [pool-1-thread-12] Initializing /data/samples/Count & Measure/color squares.tif: [testng] [2024-03-26 01:49:36,617] [pool-1-thread-9] Initializing /data/samples/Measurement & ROI/Oxyuranus_microlepidotus.tif: [testng] [2024-03-26 01:49:37,605] [pool-1-thread-12] Initializing /data/samples/Process/Epithelial Cells3.tif: [testng] [2024-03-26 01:49:38,757] [pool-1-thread-9] Initializing /data/samples/Process/HER2_FISH Assay.tif: [testng] [2024-03-26 01:49:39,561] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:49:39,865] [pool-1-thread-12] Initializing /data/anda/Image_01_V76 K2 11_lung.thumbnail.jpg: [testng] [2024-03-26 01:49:40,509] [pool-1-thread-12] Initializing /data/samples/Measurement & ROI/Intensity t series.vsi: [testng] [2024-03-26 01:49:41,599] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:49:41,605] [pool-1-thread-9] Initializing /data/samples/Fluorescence Unmixing/HeLa_GFP_only.tif: [testng] [2024-03-26 01:49:42,781] [pool-1-thread-12] Initializing /data/samples/Count & Measure/slide IHC.tif: [testng] [2024-03-26 01:49:44,094] [pool-1-thread-9] Initializing /data/gh-3859/Image_Test2.vsi: [testng] [2024-03-26 01:49:45,804] [pool-1-thread-12] Initializing /data/olivier/7262 wt col.vsi: [testng] [2024-03-26 01:49:53,134] [pool-1-thread-11] Initializing /data/samples/Measurement & ROI/Cell Multichannel-M&R.tif: [testng] [2024-03-26 01:49:55,411] [pool-1-thread-11] Initializing /data/robert/Lung_Mite.vsi: [testng] [2024-03-26 01:49:57,618] [pool-1-thread-7] Initializing /data/samples/Fluorescence/Dako_CISH.vsi: [testng] [2024-03-26 01:49:57,906] [pool-1-thread-11] Initializing /data/samples/Count & Measure/Cell Multichannel-z-stack.vsi: [testng] [2024-03-26 01:49:59,410] [pool-1-thread-11] Initializing /data/brian/BZ cfos1-2_05.vsi: [testng] [2024-03-26 01:50:01,826] [pool-1-thread-7] Initializing /data/samples/Count & Measure/color dots.tif: [testng] [2024-03-26 01:50:03,072] [pool-1-thread-1] Initializing /data/samples/Measurement & ROI/Bandy Snake.tif: [testng] [2024-03-26 01:50:04,040] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:50:05,705] [pool-1-thread-7] Initializing /data/anda/Image_01_V76 K2 11_lung.overview.jpg: [testng] [2024-03-26 01:50:06,455] [pool-1-thread-1] Initializing /data/olivier/Image_06.vsi: [testng] [2024-03-26 01:50:13,479] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:50:19,733] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:50:21,912] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:50:22,691] [pool-1-thread-7] Initializing /data/samples/Image SHOW/Layer&Channels.tif: [testng] [2024-03-26 01:50:25,315] [pool-1-thread-7] Initializing /data/samples/Measurement & ROI/Brown snake.tif: [testng] [2024-03-26 01:50:25,822] [pool-1-thread-11] Initializing /data/olivier/14-09-2012/Image_01.vsi: [testng] [2024-03-26 01:50:26,945] [pool-1-thread-7] Initializing /data/samples/Fluorescence Unmixing/HeLa_unmixed.tif: [testng] [2024-03-26 01:50:29,104] [pool-1-thread-7] Initializing /data/samples/Shading Correction/Micrometer Background.tif: [testng] [2024-03-26 01:50:30,929] [pool-1-thread-7] Initializing /data/anda/Image_01_V76 K2 11_lung.vsi: [testng] [2024-03-26 01:50:32,561] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:50:32,840] [pool-1-thread-7] Initializing /data/olivier/small-tiles/esgTS-+;Sox21a[6]-+_30D25_09.vsi: [testng] [2024-03-26 01:50:33,906] [pool-1-thread-5] Initializing /data/samples/Count & Measure/Cell Multichannel-z-stack corr..vsi: [testng] [2024-03-26 01:50:35,877] [pool-1-thread-5] Initializing /data/samples/Channels/Composite.vsi: [testng] [2024-03-26 01:50:37,089] [pool-1-thread-5] Initializing /data/public/evident/Image_V4.1_FL_3D.vsi: [testng] [2024-03-26 01:50:44,059] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:51:02,661] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:51:22,959] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:52:16,679] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:52:26,385] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-03-26 01:53:37,597] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 3816, Failures: 37, Skips: 0 [testng] =============================================== [testng] [testng] The tests failed. BUILD FAILED /bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest Total time: 13 minutes 58 seconds Build step 'Execute shell' marked build as failure Finished: FAILURE