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Started by upstream project "BIOFORMATS-test-repo" build number 125 originally caused by: Started by upstream project "Trigger" build number 142 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins1914348507627504923.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_19501_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:48,418 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:48,420 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:48,420 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:48,423 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:48,423 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:48,423 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:48,424 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:48,424 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:48,426 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:48,426 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:48,427 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:48,427 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:48,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:48,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:48,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:48,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:48,744 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:48,745 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:48,745 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:48,745 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:48,745 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:21:48,747 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:21:48,747 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 321 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-19 01:21:48,763] [main] java.version = 1.8.0_342 [testng] 01:21:48,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:48,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:48,820 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-19_01-21-48.log] [testng] 01:21:48,822 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-19 01:21:48,824] [main] testng.directory = /data [testng] [2024-07-19 01:21:48,824] [main] testng.configDirectory = /config [testng] [2024-07-19 01:21:48,838] [main] testng.multiplier = 1.0 [testng] [2024-07-19 01:21:48,839] [main] testng.in-memory = false [testng] [2024-07-19 01:21:48,839] [main] testng.allow-missing = false [testng] [2024-07-19 01:21:48,839] [main] user.language = en [testng] [2024-07-19 01:21:48,839] [main] user.country = ${user.country} [testng] [2024-07-19 01:21:48,839] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-19 01:21:58,491] [main] ---------------------------------------- [testng] [2024-07-19 01:21:58,492] [main] Total files: 4426 [testng] [2024-07-19 01:21:58,492] [main] Scan time: 9.652 s (2 ms/file) [testng] [2024-07-19 01:21:58,493] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-19 01:24:12,078] [pool-1-thread-1] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] 01:24:12,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:24:12,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,080 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-19_01-24-12.log] [testng] 01:24:12,081 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e1e9011 - End of configuration. [testng] [2024-07-19 01:24:12,158] [pool-1-thread-12] Initializing /data/glen/6307wmmidb4237m_cmle.tif: [testng] 01:24:12,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:24:12,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,159 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-19_01-24-12.log] [testng] 01:24:12,160 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19acca2e - End of configuration. [testng] [2024-07-19 01:24:12,245] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z016.tif: [testng] 01:24:12,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:24:12,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,247 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-19_01-24-12.log] [testng] 01:24:12,247 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4396f11a - End of configuration. [testng] [2024-07-19 01:24:12,283] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] 01:24:12,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:24:12,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,285 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-19_01-24-12.log] [testng] 01:24:12,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4449066a - End of configuration. [testng] [2024-07-19 01:24:12,306] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z018.tif: [testng] 01:24:12,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:24:12,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,307 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-19_01-24-12.log] [testng] 01:24:12,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3efab65f - End of configuration. [testng] [2024-07-19 01:24:12,337] [pool-1-thread-8] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] 01:24:12,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:24:12,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,338 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-19_01-24-12.log] [testng] 01:24:12,339 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20619afb - End of configuration. [testng] [2024-07-19 01:24:12,402] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z057.tif: [testng] 01:24:12,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:24:12,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-19_01-24-12.log] [testng] 01:24:12,404 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59b5499b - End of configuration. [testng] [2024-07-19 01:24:12,427] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] 01:24:12,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:24:12,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,428 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-19_01-24-12.log] [testng] 01:24:12,429 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51cb7a40 - End of configuration. [testng] [2024-07-19 01:24:12,455] [pool-1-thread-5] Initializing /data/josiah/cell-Z31.C1.tiff: [testng] 01:24:12,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:24:12,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,456 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-19_01-24-12.log] [testng] 01:24:12,457 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65d40df0 - End of configuration. [testng] [2024-07-19 01:24:12,492] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] 01:24:12,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:24:12,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,493 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-19_01-24-12.log] [testng] 01:24:12,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e4d527b - End of configuration. [testng] [2024-07-19 01:24:12,515] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z006.tif: [testng] 01:24:12,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:24:12,516 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,516 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-19_01-24-12.log] [testng] 01:24:12,517 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7902cac2 - End of configuration. [testng] [2024-07-19 01:24:12,543] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-64.tiff: [testng] 01:24:12,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:24:12,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:12,544 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-19_01-24-12.log] [testng] 01:24:12,544 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8b4036c - End of configuration. [testng] [2024-07-19 01:24:14,699] [pool-1-thread-1] Initializing /data/josiah/cell-Z26.C0.tiff: [testng] [2024-07-19 01:24:14,740] [pool-1-thread-2] Initializing /data/paulh/quickpollen4_w4_t1.tif: [testng] [2024-07-19 01:24:14,789] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z014.tif: [testng] [2024-07-19 01:24:14,813] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-07-19 01:24:14,839] [pool-1-thread-11] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-07-19 01:24:14,867] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-07-19 01:24:14,894] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-07-19 01:24:14,981] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-07-19 01:24:15,047] [pool-1-thread-3] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-07-19 01:24:15,110] [pool-1-thread-12] Initializing /data/darwinjob/SESSION4_Image2.tif: [testng] [2024-07-19 01:24:15,168] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-07-19 01:24:15,189] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z015.tif: [testng] [2024-07-19 01:24:15,835] [pool-1-thread-9] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-07-19 01:24:15,970] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-07-19 01:24:15,993] [pool-1-thread-10] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-07-19 01:24:16,060] [pool-1-thread-5] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-07-19 01:24:16,150] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-05.tiff: [testng] [2024-07-19 01:24:16,216] [pool-1-thread-11] Initializing /data/ascb/CYT-43_HowellAcinarUnlabeled_4800.tif: [testng] [2024-07-19 01:24:16,340] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-07-19 01:24:16,467] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-07-19 01:24:16,509] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-07-19 01:24:16,768] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z030.tif: [testng] [2024-07-19 01:24:16,829] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z010.tif: [testng] [2024-07-19 01:24:17,032] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-07-19 01:24:17,059] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] [2024-07-19 01:24:17,084] [pool-1-thread-4] Initializing /data/josiah/cell-Z39.C1.tiff: [testng] [2024-07-19 01:24:17,289] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0211.TIF: [testng] [2024-07-19 01:24:17,368] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern.tif: [testng] [2024-07-19 01:24:17,569] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-07-19 01:24:17,623] [pool-1-thread-6] Initializing /data/josiah/cell-Z1.C0.tiff: [testng] [2024-07-19 01:24:17,649] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-07-19 01:24:17,957] [pool-1-thread-12] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-07-19 01:24:18,043] [pool-1-thread-1] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-07-19 01:24:18,086] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-07-19 01:24:18,212] [pool-1-thread-4] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-07-19 01:24:18,645] [pool-1-thread-7] Initializing /data/zstd-compressed/yeast.tif: [testng] [2024-07-19 01:24:18,723] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-07-19 01:24:18,756] [pool-1-thread-6] Initializing /data/josiah/cell-Z33.C0.tiff: [testng] [2024-07-19 01:24:19,483] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-07-19 01:24:19,506] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-32.tiff: [testng] [2024-07-19 01:24:19,636] [pool-1-thread-12] Initializing /data/julien/baldinsug1LMP2col.TIF: [testng] [2024-07-19 01:24:19,681] [pool-1-thread-10] Initializing /data/ascb/CYT-151_Raben_Noncontractile.tif: [testng] [2024-07-19 01:24:19,752] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-07-19 01:24:19,983] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-07-19 01:24:20,115] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-07-19 01:24:20,230] [pool-1-thread-6] Initializing /data/wayne/screen-rgb.tiff: 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01:26:43,887] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] [2024-07-19 01:26:44,174] [pool-1-thread-9] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-07-19 01:26:44,306] [pool-1-thread-8] Initializing /data/misc/mri-old.mov: [testng] [2024-07-19 01:26:45,155] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z045.tif: [testng] [2024-07-19 01:26:45,452] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z029.tif: [testng] [2024-07-19 01:26:45,626] [pool-1-thread-1] Initializing /data/carolyn/tumor_4.tif: [testng] [2024-07-19 01:26:45,708] [pool-1-thread-11] Initializing /data/ascb/FND-27_PaladeGolgi_4800.tif: [testng] [2024-07-19 01:26:45,751] [pool-1-thread-9] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-07-19 01:26:45,842] [pool-1-thread-2] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-07-19 01:26:45,894] [pool-1-thread-8] Initializing /data/josiah/cell-Z19.C0.tiff: [testng] [2024-07-19 01:26:46,090] [pool-1-thread-3] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-07-19 01:26:46,547] [pool-1-thread-2] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-07-19 01:26:48,233] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] [2024-07-19 01:26:48,585] [pool-1-thread-3] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-07-19 01:26:48,652] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-07-19 01:26:48,964] [pool-1-thread-1] Initializing /data/public/condensation/C4.pattern9.tif: [testng] [2024-07-19 01:26:49,261] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z003.tif: [testng] [2024-07-19 01:26:49,610] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-07-19 01:26:49,822] [pool-1-thread-1] Initializing 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[pool-1-thread-8] Initializing /data/qa-7589/CalGrid.tif: [testng] [2024-07-19 01:26:54,161] [pool-1-thread-1] Initializing /data/damian/27m.tiff: [testng] [2024-07-19 01:26:54,220] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-07-19 01:26:54,512] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z039.tif: [testng] [2024-07-19 01:26:54,946] [pool-1-thread-1] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-07-19 01:26:54,994] [pool-1-thread-12] Initializing /data/sarah/FITC left 100% 1x mag00000.tif: [testng] [2024-07-19 01:26:55,192] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-07-19 01:26:55,493] [pool-1-thread-8] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-07-19 01:26:56,029] [pool-1-thread-6] Initializing /data/ascb/CYT-23_BaintonGlycogenB_4800.tif: [testng] [2024-07-19 01:26:57,299] [pool-1-thread-7] Initializing 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[testng] [2024-07-19 01:27:00,377] [pool-1-thread-4] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-07-19 01:27:00,564] [pool-1-thread-11] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-07-19 01:27:00,847] [pool-1-thread-12] Initializing /data/public/condensation/B12.pattern3.tif: [testng] [2024-07-19 01:27:01,580] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] [2024-07-19 01:27:01,685] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z037.tif: [testng] [2024-07-19 01:27:01,890] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-07-19 01:27:02,045] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-07-19 01:27:02,287] [pool-1-thread-11] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-07-19 01:27:02,356] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-07-19 01:27:02,886] [pool-1-thread-3] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-07-19 01:27:02,963] [pool-1-thread-11] Initializing /data/ascb/14312-p125A colocalization.tif: [testng] [2024-07-19 01:27:03,662] [pool-1-thread-12] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-07-19 01:27:03,885] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z035.tif: [testng] [2024-07-19 01:27:04,315] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-07-19 01:27:04,713] [pool-1-thread-3] Initializing /data/jayne/Zst_13/WTERZ2_Series13_z000_ch00.tif: [testng] [2024-07-19 01:27:05,428] [pool-1-thread-11] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-07-19 01:27:05,565] [pool-1-thread-8] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-07-19 01:27:05,845] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-07-19 01:27:06,068] [pool-1-thread-11] Initializing /data/pavel/Dmel/spim.pattern: [testng] [2024-07-19 01:27:07,572] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0251.TIF: [testng] [2024-07-19 01:27:07,798] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-07-19 01:27:09,037] [pool-1-thread-12] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-07-19 01:27:09,086] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x32.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 40 seconds Finished: SUCCESS