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Started by upstream project "BIOFORMATS-test-repo" build number 126 originally caused by: Started by upstream project "Trigger" build number 143 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins675045331266658588.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_19664_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:21:23,990 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:23,992 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:21:23,992 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:23,993 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:23,993 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:23,994 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:23,994 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:23,994 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:23,994 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:23,995 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:23,995 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:23,996 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:24,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:24,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:24,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:24,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:24,272 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:24,272 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:24,273 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:24,273 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:24,273 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:21:24,275 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:21:24,275 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 281 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-20 01:21:24,290] [main] java.version = 11.0.16 [testng] 01:21:24,296 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:24,296 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:24,369 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-20_01-21-24.log] [testng] 01:21:24,371 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-07-20 01:21:24,374] [main] testng.directory = /data [testng] [2024-07-20 01:21:24,375] [main] testng.configDirectory = /config [testng] [2024-07-20 01:21:24,393] [main] testng.multiplier = 1.0 [testng] [2024-07-20 01:21:24,396] [main] testng.in-memory = false [testng] [2024-07-20 01:21:24,396] [main] testng.allow-missing = false [testng] [2024-07-20 01:21:24,396] [main] user.language = en [testng] [2024-07-20 01:21:24,396] [main] user.country = ${user.country} [testng] [2024-07-20 01:21:24,397] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-20 01:21:40,127] [main] ---------------------------------------- [testng] [2024-07-20 01:21:40,128] [main] Total files: 283 [testng] [2024-07-20 01:21:40,129] [main] Scan time: 15.73 s (55 ms/file) [testng] [2024-07-20 01:21:40,129] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-20 01:30:13,462] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] 01:30:13,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:30:13,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:13,466 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-20_01-30-13.log] [testng] 01:30:13,466 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c8fef3c - End of configuration. [testng] [2024-07-20 01:30:13,847] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] 01:30:13,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:30:13,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:13,848 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-20_01-30-13.log] [testng] 01:30:13,849 |-INFO in ch.qos.logback.core.sift.SiftProcessor@151f06ce - End of configuration. [testng] [2024-07-20 01:30:13,936] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] 01:30:13,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:30:13,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:13,937 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-20_01-30-13.log] [testng] 01:30:13,938 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39ae07bb - End of configuration. [testng] [2024-07-20 01:30:14,160] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] 01:30:14,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:30:14,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:14,161 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-20_01-30-14.log] [testng] 01:30:14,161 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6246d198 - End of configuration. [testng] [2024-07-20 01:30:14,247] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:30:14,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:30:14,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:14,248 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-20_01-30-14.log] [testng] 01:30:14,248 |-INFO in ch.qos.logback.core.sift.SiftProcessor@479c6828 - End of configuration. [testng] [2024-07-20 01:30:14,268] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:30:14,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:30:14,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:14,269 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-20_01-30-14.log] [testng] 01:30:14,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@287a4bfb - End of configuration. [testng] [2024-07-20 01:30:14,320] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] 01:30:14,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:30:14,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:14,321 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-20_01-30-14.log] [testng] 01:30:14,322 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44193ccd - End of configuration. [testng] [2024-07-20 01:30:14,455] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: [testng] 01:30:14,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:30:14,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:14,456 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-20_01-30-14.log] [testng] 01:30:14,456 |-INFO in ch.qos.logback.core.sift.SiftProcessor@640211f2 - End of configuration. [testng] [2024-07-20 01:30:14,516] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 01:30:14,516 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:30:14,516 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:14,517 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-20_01-30-14.log] [testng] 01:30:14,517 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e0cc418 - End of configuration. [testng] [2024-07-20 01:30:14,573] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] 01:30:14,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:30:14,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:14,574 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-20_01-30-14.log] [testng] 01:30:14,574 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56a8ce36 - End of configuration. [testng] [2024-07-20 01:30:17,310] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] 01:30:17,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:30:17,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:17,312 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-20_01-30-17.log] [testng] 01:30:17,312 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9d53992 - End of configuration. [testng] [2024-07-20 01:30:17,409] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] 01:30:17,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:30:17,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:17,411 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-20_01-30-17.log] [testng] 01:30:17,411 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e847d21 - End of configuration. [testng] [2024-07-20 01:30:20,826] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-07-20 01:30:20,918] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-07-20 01:30:21,069] [pool-1-thread-2] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-07-20 01:30:21,234] [pool-1-thread-3] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-07-20 01:30:21,329] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-07-20 01:30:21,401] [pool-1-thread-12] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-07-20 01:30:21,940] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-07-20 01:30:22,103] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-07-20 01:30:22,217] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-07-20 01:30:22,795] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-07-20 01:30:23,299] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-07-20 01:30:24,585] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-07-20 01:30:25,036] [pool-1-thread-5] Initializing /data/qa-17919/f10187.oir: [testng] [2024-07-20 01:30:42,988] [pool-1-thread-2] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-07-20 01:30:43,357] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-07-20 01:30:43,409] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-07-20 01:30:43,470] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-07-20 01:30:43,517] [pool-1-thread-10] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-07-20 01:30:43,685] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-07-20 01:30:44,768] [pool-1-thread-6] Initializing /data/olympus/XYZt.vsi: [testng] [2024-07-20 01:30:44,797] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-07-20 01:30:45,125] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-07-20 01:30:45,139] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-07-20 01:30:45,440] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2024-07-20 01:30:45,622] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir: [testng] [2024-07-20 01:30:46,900] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-07-20 01:30:46,947] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-07-20 01:30:47,345] [pool-1-thread-6] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-07-20 01:30:51,852] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-07-20 01:30:51,897] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-07-20 01:30:52,356] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-07-20 01:30:52,691] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-07-20 01:30:52,885] [pool-1-thread-3] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-07-20 01:30:53,100] [pool-1-thread-9] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-07-20 01:30:53,257] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-07-20 01:30:53,337] [pool-1-thread-10] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-07-20 01:30:53,572] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-07-20 01:30:53,883] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-07-20 01:30:54,652] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-07-20 01:30:54,947] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-07-20 01:30:55,137] [pool-1-thread-3] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-07-20 01:30:55,471] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] 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Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-07-20 01:31:06,601] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-07-20 01:31:07,142] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-07-20 01:31:07,471] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-07-20 01:31:07,517] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-07-20 01:31:07,637] [pool-1-thread-7] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-07-20 01:31:07,971] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-07-20 01:31:08,623] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-07-20 01:31:08,815] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-07-20 01:31:09,105] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-07-20 01:31:10,020] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-07-20 01:31:10,238] [pool-1-thread-7] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-07-20 01:31:10,900] [pool-1-thread-9] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-07-20 01:31:11,472] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-07-20 01:31:14,917] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-07-20 01:31:14,968] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-07-20 01:31:15,088] [pool-1-thread-7] Initializing 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[pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-07-20 01:32:54,850] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-07-20 01:32:54,927] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-07-20 01:32:55,076] [pool-1-thread-10] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-07-20 01:32:55,973] [pool-1-thread-1] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-07-20 01:32:56,178] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-07-20 01:32:56,223] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-07-20 01:32:57,333] [pool-1-thread-7] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-07-20 01:32:57,402] [pool-1-thread-10] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-07-20 01:32:58,499] [pool-1-thread-10] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-07-20 01:32:58,892] [pool-1-thread-1] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-07-20 01:32:59,326] [pool-1-thread-7] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-07-20 01:32:59,380] [pool-1-thread-9] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-07-20 01:33:00,650] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-07-20 01:33:00,886] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-07-20 01:33:00,992] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-07-20 01:33:01,922] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-07-20 01:33:02,851] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-07-20 01:33:03,011] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-07-20 01:33:04,034] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-07-20 01:33:04,124] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-07-20 01:33:04,173] [pool-1-thread-10] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-07-20 01:33:04,688] [pool-1-thread-8] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-07-20 01:33:05,537] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-07-20 01:33:06,011] [pool-1-thread-9] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-07-20 01:33:06,353] [pool-1-thread-7] Initializing /data/qa-17335/1.oir: [testng] [2024-07-20 01:33:06,418] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-07-20 01:33:06,706] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-07-20 01:33:07,341] [pool-1-thread-1] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-07-20 01:33:07,703] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-07-20 01:33:08,057] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-07-20 01:33:08,130] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-07-20 01:33:08,793] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-07-20 01:33:09,209] [pool-1-thread-2] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-07-20 01:33:09,486] [pool-1-thread-9] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-07-20 01:33:09,859] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-07-20 01:33:10,282] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-07-20 01:33:10,677] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-07-20 01:33:10,716] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-07-20 01:33:11,112] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-07-20 01:33:11,686] [pool-1-thread-7] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-07-20 01:33:11,905] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-07-20 01:33:12,048] [pool-1-thread-9] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-07-20 01:33:12,573] [pool-1-thread-10] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-07-20 01:33:13,122] [pool-1-thread-9] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-07-20 01:33:13,484] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-07-20 01:33:13,570] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-07-20 01:33:14,388] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-07-20 01:33:15,054] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-07-20 01:33:15,497] [pool-1-thread-10] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-07-20 01:33:15,589] [pool-1-thread-7] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-07-20 01:33:15,718] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-07-20 01:33:15,879] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-07-20 01:33:20,151] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-07-20 01:33:20,794] [pool-1-thread-2] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-07-20 01:33:21,192] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-07-20 01:33:21,264] [pool-1-thread-7] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 45 minutes 41 seconds Finished: SUCCESS