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Started by upstream project "BIOFORMATS-test-repo" build number 128 originally caused by: Started by upstream project "Trigger" build number 145 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins6702570597683606797.sh + '[' afi = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_20062_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:52:03,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:52:03,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:52:03,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:52:03,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:52:03,605 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:52:03,605 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:52:03,605 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:52:03,606 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:52:03,606 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:52:03,607 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:52:03,607 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 398 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-22 01:52:03,621] [main] java.version = 1.8.0_342 [testng] 01:52:03,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:52:03,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:03,698 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-22_01-52-03.log] [testng] 01:52:03,700 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-22 01:52:03,702] [main] testng.directory = /data [testng] [2024-07-22 01:52:03,702] [main] testng.configDirectory = /config [testng] [2024-07-22 01:52:03,724] [main] testng.multiplier = 1.0 [testng] [2024-07-22 01:52:03,725] [main] testng.in-memory = false [testng] [2024-07-22 01:52:03,725] [main] testng.allow-missing = false [testng] [2024-07-22 01:52:03,725] [main] user.language = fr [testng] [2024-07-22 01:52:03,725] [main] user.country = FR [testng] [2024-07-22 01:52:03,725] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-22 01:52:04,688] [main] ---------------------------------------- [testng] [2024-07-22 01:52:04,688] [main] Total files: 16 [testng] [2024-07-22 01:52:04,688] [main] Scan time: 0.963 s (60 ms/file) [testng] [2024-07-22 01:52:04,688] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 15 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-22 01:52:18,449] [pool-1-thread-1] Initializing /data/samples/5400.afi: [testng] 01:52:18,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:52:18,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:18,451 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-22_01-52-18.log] [testng] 01:52:18,452 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f686842 - End of configuration. [testng] [2024-07-22 01:52:18,599] [pool-1-thread-12] Initializing /data/samples/5351.afi: [testng] 01:52:18,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:52:18,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:18,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-22_01-52-18.log] [testng] 01:52:18,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d0a6af8 - End of configuration. [testng] [2024-07-22 01:52:18,745] [pool-1-thread-11] Initializing /data/samples/5306.afi: [testng] 01:52:18,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:52:18,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:18,746 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-22_01-52-18.log] [testng] 01:52:18,747 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c3a9796 - End of configuration. [testng] [2024-07-22 01:52:18,815] [pool-1-thread-10] Initializing /data/samples/5383.afi: [testng] 01:52:18,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:52:18,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:18,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-22_01-52-18.log] [testng] 01:52:18,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@656a21b5 - End of configuration. [testng] [2024-07-22 01:52:18,905] [pool-1-thread-9] Initializing /data/samples/5365.afi: [testng] 01:52:18,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:52:18,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:18,906 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-22_01-52-18.log] [testng] 01:52:18,907 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22c473bb - End of configuration. [testng] [2024-07-22 01:52:18,989] [pool-1-thread-8] Initializing /data/samples/5440.afi: [testng] 01:52:18,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:52:18,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:18,990 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-22_01-52-18.log] [testng] 01:52:18,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2910e6af - End of configuration. [testng] [2024-07-22 01:52:19,198] [pool-1-thread-7] Initializing /data/samples/5446.afi: [testng] 01:52:19,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:52:19,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:19,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-22_01-52-19.log] [testng] 01:52:19,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68a76090 - End of configuration. [testng] [2024-07-22 01:52:19,270] [pool-1-thread-6] Initializing /data/samples/5339.afi: [testng] 01:52:19,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:52:19,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:19,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-22_01-52-19.log] [testng] 01:52:19,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a544f1c - End of configuration. [testng] [2024-07-22 01:52:19,352] [pool-1-thread-5] Initializing /data/samples/5387.afi: [testng] 01:52:19,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:52:19,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:19,353 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-22_01-52-19.log] [testng] 01:52:19,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5986ff5a - End of configuration. [testng] [2024-07-22 01:52:19,464] [pool-1-thread-4] Initializing /data/samples/5407.afi: [testng] 01:52:19,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:52:19,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:19,465 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-22_01-52-19.log] [testng] 01:52:19,466 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a2e29ff - End of configuration. [testng] [2024-07-22 01:52:19,543] [pool-1-thread-3] Initializing /data/samples/5347.afi: [testng] 01:52:19,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:52:19,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:19,544 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-22_01-52-19.log] [testng] 01:52:19,545 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22e92bb5 - End of configuration. [testng] [2024-07-22 01:52:19,645] [pool-1-thread-2] Initializing /data/samples/5358.afi: [testng] 01:52:19,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:52:19,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:19,646 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-22_01-52-19.log] [testng] 01:52:19,647 |-INFO in ch.qos.logback.core.sift.SiftProcessor@491d2225 - End of configuration. [testng] [2024-07-22 01:53:11,159] [pool-1-thread-8] Initializing /data/samples/5414.afi: [testng] [2024-07-22 01:53:12,157] [pool-1-thread-1] Initializing /data/samples/5343.afi: [testng] [2024-07-22 01:53:12,478] [pool-1-thread-3] Initializing /data/samples/5371.afi: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 795, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 51 seconds Finished: SUCCESS