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Started by upstream project "BIOFORMATS-test-repo" build number 129 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins17616106018432404166.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_20157_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 13:52:20,342 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 13:52:20,344 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 13:52:20,344 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 13:52:20,345 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 13:52:20,345 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 13:52:20,345 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 13:52:20,346 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 13:52:20,346 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 13:52:20,346 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 13:52:20,347 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 13:52:20,347 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 13:52:20,347 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 13:52:20,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 13:52:20,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 13:52:20,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 13:52:20,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 13:52:20,670 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 13:52:20,670 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 13:52:20,670 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 13:52:20,671 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 13:52:20,671 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 13:52:20,672 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 13:52:20,672 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 326 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-22 13:52:20,682] [main] java.version = 1.8.0_342 [testng] 13:52:20,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 13:52:20,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:52:20,734 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-22_13-52-20.log] [testng] 13:52:20,736 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-22 13:52:20,738] [main] testng.directory = /data [testng] [2024-07-22 13:52:20,739] [main] testng.configDirectory = /config [testng] [2024-07-22 13:52:20,752] [main] testng.multiplier = 1.0 [testng] [2024-07-22 13:52:20,752] [main] testng.in-memory = false [testng] [2024-07-22 13:52:20,752] [main] testng.allow-missing = false [testng] [2024-07-22 13:52:20,752] [main] user.language = fr [testng] [2024-07-22 13:52:20,752] [main] user.country = FR [testng] [2024-07-22 13:52:20,752] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-22 13:52:31,369] [main] ---------------------------------------- [testng] [2024-07-22 13:52:31,369] [main] Total files: 4426 [testng] [2024-07-22 13:52:31,369] [main] Scan time: 10.616 s (2 ms/file) [testng] [2024-07-22 13:52:31,370] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-22 13:54:43,660] [pool-1-thread-1] Initializing /data/lzw/DendriteForks.tif: [testng] 13:54:43,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 13:54:43,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:43,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-22_13-54-43.log] [testng] 13:54:43,663 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a913ea1 - End of configuration. [testng] [2024-07-22 13:54:43,740] [pool-1-thread-12] Initializing /data/damian/27m.tiff: [testng] 13:54:43,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 13:54:43,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:43,741 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-22_13-54-43.log] [testng] 13:54:43,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@715a257d - End of configuration. [testng] [2024-07-22 13:54:43,785] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] 13:54:43,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 13:54:43,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:43,786 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-22_13-54-43.log] [testng] 13:54:43,787 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27006356 - End of configuration. [testng] [2024-07-22 13:54:43,842] [pool-1-thread-10] Initializing /data/samples/cielab/Ski_TC8-03_sRGB.tif: [testng] 13:54:43,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 13:54:43,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:43,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-22_13-54-43.log] [testng] 13:54:43,844 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35c6142f - End of configuration. [testng] [2024-07-22 13:54:43,917] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] 13:54:43,918 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 13:54:43,918 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:43,918 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-22_13-54-43.log] [testng] 13:54:43,919 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6970caf3 - End of configuration. [testng] [2024-07-22 13:54:43,958] [pool-1-thread-8] Initializing /data/public/libtiff/jim___gg.tif: [testng] 13:54:43,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 13:54:43,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:43,959 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-22_13-54-43.log] [testng] 13:54:43,960 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b2d818d - End of configuration. [testng] [2024-07-22 13:54:43,990] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] 13:54:43,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 13:54:43,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:43,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-22_13-54-43.log] [testng] 13:54:43,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51e2b9ad - End of configuration. [testng] [2024-07-22 13:54:44,022] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z037.tif: [testng] 13:54:44,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 13:54:44,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:44,023 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-22_13-54-44.log] [testng] 13:54:44,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@feb4d2a - End of configuration. [testng] [2024-07-22 13:54:44,063] [pool-1-thread-5] Initializing /data/josiah/cell-Z28.C0.tiff: [testng] 13:54:44,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 13:54:44,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:44,064 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-22_13-54-44.log] [testng] 13:54:44,065 |-INFO in ch.qos.logback.core.sift.SiftProcessor@661fbcce - End of configuration. [testng] [2024-07-22 13:54:44,113] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] 13:54:44,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 13:54:44,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:44,114 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-22_13-54-44.log] [testng] 13:54:44,114 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d170f5d - End of configuration. [testng] [2024-07-22 13:54:44,139] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] 13:54:44,139 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 13:54:44,139 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:44,140 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-22_13-54-44.log] [testng] 13:54:44,140 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23597c3 - End of configuration. [testng] [2024-07-22 13:54:44,164] [pool-1-thread-2] Initializing /data/samples/melissa/imagej-last-ifd/Rat_Hippocampal_Neuron.tif: [testng] 13:54:44,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 13:54:44,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:54:44,164 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-22_13-54-44.log] [testng] 13:54:44,165 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f74bd38 - End of configuration. [testng] [2024-07-22 13:54:47,057] [pool-1-thread-4] Initializing /data/josiah/cell-Z21.C1.tiff: [testng] [2024-07-22 13:54:47,146] [pool-1-thread-7] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-07-22 13:54:47,331] [pool-1-thread-8] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-07-22 13:54:47,410] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z039.tif: [testng] [2024-07-22 13:54:47,437] [pool-1-thread-5] Initializing /data/alexa/test4.tif: [testng] [2024-07-22 13:54:47,458] [pool-1-thread-2] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-07-22 13:54:47,509] [pool-1-thread-9] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-07-22 13:54:47,534] [pool-1-thread-12] Initializing /data/damian/15m.tiff: [testng] [2024-07-22 13:54:47,559] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-05.tiff: [testng] [2024-07-22 13:54:47,581] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-07-22 13:54:47,738] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z005.tif: [testng] [2024-07-22 13:54:48,274] [pool-1-thread-11] Initializing /data/misc/mri-stack.tif: [testng] [2024-07-22 13:54:48,327] [pool-1-thread-5] Initializing /data/ascb/14312-p125A colocalization.tif: [testng] [2024-07-22 13:54:48,396] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-07-22 13:54:48,424] [pool-1-thread-4] Initializing /data/josh/3Aa_C2_TP1.tiff: [testng] [2024-07-22 13:54:48,472] [pool-1-thread-6] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-07-22 13:54:48,684] [pool-1-thread-12] Initializing /data/samples/melissa/16-signed-lzw-differenced.tiff: [testng] [2024-07-22 13:54:48,762] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-07-22 13:54:48,780] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-07-22 13:54:48,833] [pool-1-thread-1] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-07-22 13:54:49,384] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-07-22 13:54:49,410] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-07-22 13:54:49,699] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-07-22 13:54:49,747] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z022.tif: [testng] [2024-07-22 13:54:49,797] [pool-1-thread-11] Initializing /data/josiah/cell-Z35.C0.tiff: [testng] [2024-07-22 13:54:50,085] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-07-22 13:54:50,228] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-07-22 13:54:50,316] [pool-1-thread-2] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-07-22 13:54:50,430] [pool-1-thread-8] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-07-22 13:54:50,497] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-07-22 13:54:50,591] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-07-22 13:54:50,640] [pool-1-thread-9] Initializing /data/public/libtiff/jim___cg.tif: [testng] [2024-07-22 13:54:50,902] [pool-1-thread-11] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-07-22 13:54:51,044] [pool-1-thread-5] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-07-22 13:54:51,351] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z009.tif: [testng] [2024-07-22 13:54:51,376] [pool-1-thread-9] Initializing /data/josiah/cell-Z31.C1.tiff: [testng] [2024-07-22 13:54:51,431] [pool-1-thread-3] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-07-22 13:54:51,486] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z053.tif: [testng] [2024-07-22 13:54:51,605] [pool-1-thread-7] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-07-22 13:54:51,785] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] [2024-07-22 13:54:51,931] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-07-22 13:54:52,029] [pool-1-thread-8] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-07-22 13:54:52,182] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-07-22 13:54:52,227] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z019.tif: [testng] [2024-07-22 13:54:52,299] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-07-22 13:54:52,377] [pool-1-thread-9] Initializing /data/samples/melissa/imagej-4gb/4gb-test&sizeX=1024&sizeY=1024&pixelType=uint16&sizeC=2050.fake: [testng] 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13:57:31,758] [pool-1-thread-3] Initializing /data/public/libtiff/jello.tif: [testng] [2024-07-22 13:57:32,229] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-07-22 13:57:32,364] [pool-1-thread-3] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-07-22 13:57:32,453] [pool-1-thread-8] Initializing /data/josiah/cell-Z34.C0.tiff: [testng] [2024-07-22 13:57:32,839] [pool-1-thread-11] Initializing /data/josiah/cell-Z9.C1.tiff: [testng] [2024-07-22 13:57:33,435] [pool-1-thread-6] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-07-22 13:57:33,528] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-07-22 13:57:33,609] [pool-1-thread-3] Initializing /data/lzw/Cortico-Striatal.tif: [testng] [2024-07-22 13:57:33,854] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-32.tiff: [testng] [2024-07-22 13:57:34,240] [pool-1-thread-1] Initializing /data/josiah/cell-Z17.C1.tiff: [testng] [2024-07-22 13:57:34,353] [pool-1-thread-12] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina.tif: [testng] [2024-07-22 13:57:34,709] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-07-22 13:57:35,109] [pool-1-thread-8] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-07-22 13:57:35,162] [pool-1-thread-6] Initializing /data/martin/tester.tif: [testng] [2024-07-22 13:57:35,453] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z036.tif: [testng] [2024-07-22 13:57:35,506] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z020.tif: [testng] [2024-07-22 13:57:35,974] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-07-22 13:57:35,998] [pool-1-thread-8] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] [2024-07-22 13:57:37,539] [pool-1-thread-3] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-07-22 13:57:37,726] [pool-1-thread-1] Initializing /data/damian/18m.tiff: [testng] [2024-07-22 13:57:38,096] [pool-1-thread-11] Initializing /data/josiah/cell-Z14.C1.tiff: [testng] [2024-07-22 13:57:38,431] [pool-1-thread-1] Initializing /data/public/cellprofiler/fruit-fly-cells/POS076.pattern/POS076.pattern: [testng] [2024-07-22 13:57:38,958] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-07-22 13:57:39,109] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z056.tif: [testng] [2024-07-22 13:57:39,706] [pool-1-thread-11] Initializing /data/public/condensation/C4.pattern.tif: [testng] [2024-07-22 13:57:40,042] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-07-22 13:57:40,429] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x32.tiff: [testng] [2024-07-22 13:57:40,856] [pool-1-thread-11] Initializing 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[pool-1-thread-6] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-07-22 13:57:45,105] [pool-1-thread-7] Initializing /data/damian/00m.tiff: [testng] [2024-07-22 13:57:45,345] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0248.TIF: [testng] [2024-07-22 13:57:46,789] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z030.tif: [testng] [2024-07-22 13:57:46,844] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] [2024-07-22 13:57:46,889] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-07-22 13:57:47,339] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-07-22 13:57:47,447] [pool-1-thread-2] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-07-22 13:57:47,780] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-07-22 13:57:48,407] [pool-1-thread-1] Initializing 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/data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-07-22 13:57:53,504] [pool-1-thread-2] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-07-22 13:57:53,579] [pool-1-thread-7] Initializing /data/misc/mri-new.mov: [testng] [2024-07-22 13:57:53,820] [pool-1-thread-4] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-07-22 13:57:53,978] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z050.tif: [testng] [2024-07-22 13:57:54,630] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-07-22 13:57:54,762] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z010.tif: [testng] [2024-07-22 13:57:54,958] [pool-1-thread-7] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-07-22 13:57:55,361] [pool-1-thread-4] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-07-22 13:57:56,481] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-07-22 13:57:56,670] [pool-1-thread-2] Initializing /data/tamjid/10_para-stage 1.tiff: [testng] [2024-07-22 13:57:57,821] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-07-22 13:57:57,873] [pool-1-thread-9] Initializing /data/damian/36m.tiff: [testng] [2024-07-22 13:57:58,350] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-07-22 13:57:58,392] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-07-22 13:57:58,890] [pool-1-thread-2] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-07-22 13:57:59,531] [pool-1-thread-7] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-07-22 13:57:59,703] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-07-22 13:58:00,210] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z000.tif: [testng] [2024-07-22 13:58:00,248] [pool-1-thread-7] Initializing /data/misc/mri.eps: [testng] [2024-07-22 13:58:00,315] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0242.TIF: [testng] [2024-07-22 13:58:00,380] [pool-1-thread-4] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-07-22 13:58:00,593] [pool-1-thread-7] Initializing /data/jae/first image.tif: [testng] [2024-07-22 13:58:00,735] [pool-1-thread-11] Initializing /data/samples/melissa/strike-uncompressed.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 58 seconds Finished: SUCCESS