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Started by upstream project "BIOFORMATS-test-repo" build number 129 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins15099080002744981533.sh + '[' metamorph = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_20230_merge_ci -v /uod/idr/repos/curated/metamorph:/data -v /uod/idr-scratch/merge-ci/curated/metamorph:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 14:16:47,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 14:16:47,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 14:16:47,902 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 14:16:47,902 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 14:16:47,916 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 14:16:47,916 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 14:16:47,916 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 14:16:47,917 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 14:16:47,917 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 14:16:47,919 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 14:16:47,919 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 480 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-22 14:16:47,935] [main] java.version = 1.8.0_342 [testng] 14:16:47,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 14:16:47,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:16:48,013 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-22_14-16-47.log] [testng] 14:16:48,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-22 14:16:48,018] [main] testng.directory = /data [testng] [2024-07-22 14:16:48,018] [main] testng.configDirectory = /config [testng] [2024-07-22 14:16:48,036] [main] testng.multiplier = 1.0 [testng] [2024-07-22 14:16:48,036] [main] testng.in-memory = false [testng] [2024-07-22 14:16:48,036] [main] testng.allow-missing = false [testng] [2024-07-22 14:16:48,036] [main] user.language = fr [testng] [2024-07-22 14:16:48,037] [main] user.country = FR [testng] [2024-07-22 14:16:48,037] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-22 14:25:25,711] [main] ---------------------------------------- [testng] [2024-07-22 14:25:25,712] [main] Total files: 7329 [testng] [2024-07-22 14:25:25,712] [main] Scan time: 517.674 s (70 ms/file) [testng] [2024-07-22 14:25:25,713] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 209 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-22 14:28:52,354] [pool-1-thread-1] Initializing /data/chris/test2_w2_s1_t2.stk: [testng] 14:28:52,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 14:28:52,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:52,356 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-22_14-28-52.log] [testng] 14:28:52,356 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ccf23c3 - End of configuration. [testng] [2024-07-22 14:28:52,436] [pool-1-thread-12] Initializing /data/samples/zserEight.stk: [testng] 14:28:52,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 14:28:52,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:52,437 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-22_14-28-52.log] [testng] 14:28:52,437 |-INFO in ch.qos.logback.core.sift.SiftProcessor@681bd36f - End of configuration. [testng] [2024-07-22 14:28:52,463] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w3Filter TRITC.jpg: [testng] 14:28:52,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 14:28:52,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:52,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-22_14-28-52.log] [testng] 14:28:52,465 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59dfe4c1 - End of configuration. [testng] [2024-07-22 14:28:52,485] [pool-1-thread-10] Initializing /data/graham/G_Wright raw.stk: [testng] 14:28:52,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 14:28:52,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:52,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-22_14-28-52.log] [testng] 14:28:52,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4eaf326d - End of configuration. [testng] [2024-07-22 14:28:52,559] [pool-1-thread-9] Initializing /data/mike/TEST 1_7_w2EN GFP_s1_t61.STK: [testng] 14:28:52,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 14:28:52,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:52,560 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-22_14-28-52.log] [testng] 14:28:52,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b49a0d - End of configuration. [testng] [2024-07-22 14:28:52,639] [pool-1-thread-8] Initializing /data/alex/13/LJN_Y1136_13_w2FITC_t2.STK: [testng] 14:28:52,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 14:28:52,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:52,641 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-22_14-28-52.log] [testng] 14:28:52,641 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c2f7ec - End of configuration. [testng] [2024-07-22 14:28:52,680] [pool-1-thread-7] Initializing /data/grant/XYZC_Image_w1FITC.STK: [testng] 14:28:52,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 14:28:52,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:52,681 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-22_14-28-52.log] [testng] 14:28:52,682 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f2489ff - End of configuration. [testng] [2024-07-22 14:28:52,798] [pool-1-thread-6] Initializing /data/aaron/L15_CTRL_FC1d_416_Da1.stk: [testng] 14:28:52,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 14:28:52,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:52,799 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-22_14-28-52.log] [testng] 14:28:52,800 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25201a86 - End of configuration. [testng] [2024-07-22 14:28:52,933] [pool-1-thread-5] Initializing /data/andressa/RPE/Sparse/Serum/Color Combine.tif: [testng] 14:28:52,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 14:28:52,934 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:52,934 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-22_14-28-52.log] [testng] 14:28:52,934 |-INFO in ch.qos.logback.core.sift.SiftProcessor@788e7ed4 - End of configuration. [testng] [2024-07-22 14:28:53,007] [pool-1-thread-4] Initializing /data/lee/20130116-u2os-celldensitytest-72h-96h_m08_s9_w2766e46f1-81be-45a2-88b1-abe8da58c47a.tif: [testng] 14:28:53,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 14:28:53,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:53,008 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-22_14-28-53.log] [testng] 14:28:53,009 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17be5140 - End of configuration. [testng] [2024-07-22 14:28:53,058] [pool-1-thread-3] Initializing /data/josh/2101to800.stk: [testng] 14:28:53,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 14:28:53,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:53,059 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-22_14-28-53.log] [testng] 14:28:53,059 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ef75a4c - End of configuration. [testng] [2024-07-22 14:28:53,690] [pool-1-thread-2] Initializing /data/jacek/YFP2trans.tif: [testng] 14:28:53,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 14:28:53,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:28:53,691 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-22_14-28-53.log] [testng] 14:28:53,691 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f55a009 - End of configuration. [testng] [2024-07-22 14:28:54,755] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:55,236] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:55,531] [pool-1-thread-1] Initializing /data/josh/EditedMovies/2101to600a.stk: [testng] [2024-07-22 14:28:58,263] [pool-1-thread-8] Initializing /data/josh/2101to600astk.stk: [testng] [2024-07-22 14:29:07,936] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:08,190] [pool-1-thread-11] Initializing /data/qa-31304/Well _C6_1.tif: [testng] [2024-07-22 14:29:08,574] [pool-1-thread-10] Initializing /data/ascb/mt racgap1 dna.tif: [testng] [2024-07-22 14:29:08,632] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:08,806] [pool-1-thread-2] Initializing /data/ved/Expt01_w1CFP FRET-S ND0.5_t1.TIF: [testng] [2024-07-22 14:29:08,888] [pool-1-thread-9] Initializing /data/andressa/MCF-10A/Sparse/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:08,976] [pool-1-thread-4] Initializing /data/lee/397_w1447 laser_s17_t1_bad.TIF: [testng] [2024-07-22 14:29:09,116] [pool-1-thread-6] Initializing /data/tristan/data IJM/mw3/MDA_MW3(GFP-RFP-GLP)_w1GFP.TIF: [testng] [2024-07-22 14:29:09,297] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-3.tif: [testng] [2024-07-22 14:29:09,882] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:10,010] [pool-1-thread-12] Initializing /data/hms/HCT116_w1Phase FITC_s7_t1.TIF: [testng] [2024-07-22 14:29:10,889] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:11,075] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:11,172] [pool-1-thread-5] Initializing /data/alex/15/LJN_Y1136_15_w2DAPI_t2.STK: [testng] [2024-07-22 14:29:11,197] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s4t41_w1Laser4054BD4BP_s1_t1.stk: [testng] [2024-07-22 14:29:11,519] [pool-1-thread-9] Initializing /data/lee/IXMtest_P24_s9_w560D948A4-4D16-49D0-9080-7575267498F9.tif: [testng] [2024-07-22 14:29:11,616] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:11,647] [pool-1-thread-2] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t41_w1Laser4054BD4BP_t1.stk: [testng] [2024-07-22 14:29:11,695] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine-2.tif: [testng] [2024-07-22 14:29:11,793] [pool-1-thread-7] Initializing /data/samples/single-series-test/test_w1.TIF: [testng] [2024-07-22 14:29:11,849] [pool-1-thread-11] Initializing /data/steve/Experiment2.stk: [testng] [2024-07-22 14:29:11,902] [pool-1-thread-6] Initializing /data/grant/XYZCT_Image_w1FITC_t1.STK: [testng] [2024-07-22 14:29:12,021] [pool-1-thread-5] Initializing /data/chris/exp1_w1CSU GREEN_s3_t001.stk: [testng] [2024-07-22 14:29:12,297] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:12,423] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:12,428] [pool-1-thread-9] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t2.TIF: [testng] [2024-07-22 14:29:12,502] [pool-1-thread-9] Used files list does not include base file [testng] [2024-07-22 14:29:12,516] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-4.tif: [testng] [2024-07-22 14:29:12,611] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:12,774] [pool-1-thread-11] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w2Laser4914BD4BP_OverView.tif: [testng] [2024-07-22 14:29:12,797] [pool-1-thread-11] Used files list does not include base file [testng] [2024-07-22 14:29:12,866] [pool-1-thread-10] Initializing /data/cumol-test-series/23.001: [testng] [2024-07-22 14:29:12,936] [pool-1-thread-7] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c1s1t1.tif: [testng] [2024-07-22 14:29:13,050] [pool-1-thread-5] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:13,196] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:13,263] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:13,309] [pool-1-thread-11] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t2.TIF: [testng] [2024-07-22 14:29:13,373] [pool-1-thread-11] Used files list does not include base file [testng] [2024-07-22 14:29:13,411] [pool-1-thread-7] Initializing /data/thomas/test.tif: [testng] [2024-07-22 14:29:13,466] [pool-1-thread-4] Initializing /data/graham/G_Wright deconvolved.stk: [testng] [2024-07-22 14:29:13,743] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:13,854] [pool-1-thread-2] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t2.TIF: [testng] [2024-07-22 14:29:13,938] [pool-1-thread-2] Used files list does not include base file [testng] [2024-07-22 14:29:14,075] [pool-1-thread-3] Initializing /data/qa-16915/m-04.tif: [testng] [2024-07-22 14:29:14,461] [pool-1-thread-6] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment3_w1CFP-YFP FRET 446.TIF: [testng] [2024-07-22 14:29:14,511] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:14,573] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:14,700] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:14,774] [pool-1-thread-9] Initializing /data/imagesc-39526/bottom/956662_PVTom_L7day_4x_z10um_bottom_Region-1_nTiles-029_1_conf561_s1.stk: [testng] [2024-07-22 14:29:15,111] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w1Laser4054BD4BP_OverView.tif: [testng] [2024-07-22 14:29:15,155] [pool-1-thread-10] Used files list does not include base file [testng] [2024-07-22 14:29:15,227] [pool-1-thread-7] Initializing /data/josh/2101to400astk.stk: [testng] [2024-07-22 14:29:17,138] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:17,290] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:17,320] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:17,366] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:17,567] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:17,621] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t2.TIF: [testng] [2024-07-22 14:29:17,664] [pool-1-thread-10] Used files list does not include base file [testng] [2024-07-22 14:29:17,685] [pool-1-thread-5] Initializing /data/ascb/mt aim.tif: [testng] [2024-07-22 14:29:17,749] [pool-1-thread-6] Initializing /data/qa-16915/m-02.tif: [testng] [2024-07-22 14:29:18,138] [pool-1-thread-11] Initializing /data/ascb/mt mklp1.tif: [testng] [2024-07-22 14:29:18,637] [pool-1-thread-4] Initializing /data/samples/zserSixteen.stk: [testng] [2024-07-22 14:29:18,722] [pool-1-thread-2] Initializing /data/chris-de-graffenried/ND C4 488 PLK 5682_w1sRFP.stk: [testng] [2024-07-22 14:29:19,131] [pool-1-thread-4] Initializing /data/sebastien-besson/002/120119_VimMito_002_w1DIC_t1.TIF: [testng] [2024-07-22 14:29:19,330] [pool-1-thread-5] Initializing /data/josh/2101to600f.stk: [testng] [2024-07-22 14:29:22,259] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:22,270] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:22,364] [pool-1-thread-11] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2_001_w1DUAL 491-561_t1.TIF: [testng] [2024-07-22 14:29:22,915] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge.TIF: [testng] [2024-07-22 14:29:23,000] [pool-1-thread-10] Initializing /data/jcb/201008090/Color Combine.stk: [testng] [2024-07-22 14:29:23,236] [pool-1-thread-2] Initializing /data/qa-17827/G28P2E10-2 x5.TIF: [testng] [2024-07-22 14:29:23,690] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:24,391] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:24,619] [pool-1-thread-6] Initializing /data/jcb/201008090/3T3_ShhN_C_Chh488.stk: [testng] [2024-07-22 14:29:24,932] [pool-1-thread-10] Initializing /data/josh/EditedMovies/2101to600b.stk: [testng] [2024-07-22 14:29:25,871] [pool-1-thread-2] Initializing /data/dave/Z Series.stk: [testng] [2024-07-22 14:29:26,141] [pool-1-thread-3] Initializing /data/andressa/RPE/Sparse/Collagen/Color Combine.tif: [testng] [2024-07-22 14:29:26,526] [pool-1-thread-11] Initializing /data/benedikt/LosslessCompressedSTK.stk: [testng] [2024-07-22 14:29:27,599] [pool-1-thread-2] Initializing /data/jayne/2celltest10fpstl65power.stk: [testng] [2024-07-22 14:29:27,793] [pool-1-thread-6] Initializing /data/alex/48h/48h_siGW25_w2FITC.TIF: [testng] [2024-07-22 14:29:28,468] [pool-1-thread-3] Initializing /data/jmuhlich/rgb_w1_s1_t1.TIF: [testng] [2024-07-22 14:29:28,632] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:28,932] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:29,260] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine.tif: [testng] [2024-07-22 14:29:29,540] [pool-1-thread-6] Initializing /data/stephane/Lame7-E5-Y+-001.stk: [testng] [2024-07-22 14:29:30,016] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:30,587] [pool-1-thread-6] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/Color Combine.tif: [testng] [2024-07-22 14:29:31,154] [pool-1-thread-1] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/Color Combine.tif: [testng] [2024-07-22 14:29:31,618] [pool-1-thread-2] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s1t11_w1Laser4054BD4BP.tif: [testng] [2024-07-22 14:29:31,709] [pool-1-thread-3] Initializing /data/heiko/sample_3x3.stk: [testng] [2024-07-22 14:29:31,953] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:32,210] [pool-1-thread-2] Initializing /data/jacques/Repositionnement/Repositionnement_s1_t1.TIF: [testng] [2024-07-22 14:29:32,372] [pool-1-thread-6] Initializing /data/sebastien-besson/001/120119_VimMito_001_w1DIC_t1.TIF: [testng] [2024-07-22 14:29:33,286] [pool-1-thread-1] Initializing /data/qa-30870/220209_posit5.tif: [testng] [2024-07-22 14:29:33,946] [pool-1-thread-10] Initializing /data/grant/XYZ_Image.STK: [testng] [2024-07-22 14:29:34,917] [pool-1-thread-3] Initializing /data/sebastien-besson/A._WTChlor.2.nd_[Stage1__Position52_]/A. WTChlor.2_w20 Brightfield_s4.TIF: [testng] [2024-07-22 14:29:35,143] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:35,176] [pool-1-thread-11] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w2Laser4914BD4BP_OverView.tif: [testng] [2024-07-22 14:29:35,203] [pool-1-thread-11] Used files list does not include base file [testng] [2024-07-22 14:29:35,477] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:35,636] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:36,000] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:36,257] [pool-1-thread-12] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:36,363] [pool-1-thread-1] Initializing /data/chris-de-graffenried/2011-05-30/ND C4 488 PLK 5682_w1sRFP.stk: [testng] [2024-07-22 14:29:36,431] [pool-1-thread-11] Initializing /data/andressa/RPE/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:36,568] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t1.TIF: [testng] [2024-07-22 14:29:36,741] [pool-1-thread-10] Used files list does not include base file [testng] [2024-07-22 14:29:36,957] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-5.tif: [testng] [2024-07-22 14:29:37,121] [pool-1-thread-2] Initializing /data/chris/exp1_w2CSU RED_s3_t002.stk: [testng] [2024-07-22 14:29:37,350] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:37,848] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:37,884] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:37,936] [pool-1-thread-4] Initializing /data/qa-16907/1_w1Single SPI 405.TIF: [testng] [2024-07-22 14:29:38,316] [pool-1-thread-12] Initializing /data/qa-16915/m-02-488.ome.tif: [testng] [2024-07-22 14:29:38,673] [pool-1-thread-2] Initializing /data/imagesc-39526/20200622_GDF9_D21_MT Ovary_1/MT_Ovary-11_w1conf640_s1.stk: [testng] [2024-07-22 14:29:39,187] [pool-1-thread-1] Initializing /data/josh/EditedMovies/2101to400b.stk: [testng] [2024-07-22 14:29:41,860] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:41,860] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:41,876] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:42,160] [pool-1-thread-7] Initializing /data/josh/2101to600e.stk: [testng] [2024-07-22 14:29:42,974] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:43,433] [pool-1-thread-4] Initializing /data/samples/zseries.stk: [testng] [2024-07-22 14:29:43,753] [pool-1-thread-10] Initializing /data/grant/X.STK: [testng] [2024-07-22 14:29:44,118] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:44,486] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:44,658] [pool-1-thread-4] Initializing /data/tristan/data IJM/mw1/MDA_mw1(GFP)_w1GFP.TIF: [testng] [2024-07-22 14:29:44,700] [pool-1-thread-12] Initializing /data/sebastien-besson/new/120711_D2_001/120711_D2_001_w1DUAL 491-561_t1.TIF: [testng] [2024-07-22 14:29:44,972] [pool-1-thread-3] Initializing /data/tristan/data IJM/tl/MDA_TL_t1.TIF: [testng] [2024-07-22 14:29:45,066] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:45,171] [pool-1-thread-11] Initializing /data/samples/10xcalib.tif: [testng] [2024-07-22 14:29:45,300] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:45,694] [pool-1-thread-11] Initializing /data/qa-16915/m-02-561.ome.tif: [testng] [2024-07-22 14:29:45,822] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:46,163] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:46,365] [pool-1-thread-4] Initializing /data/chris/exp1_w1_s1_t1.tif: [testng] [2024-07-22 14:29:46,550] [pool-1-thread-10] Initializing /data/samples/diatoms3d.stk: [testng] [2024-07-22 14:29:46,971] [pool-1-thread-3] Initializing /data/david/tl4.tif: [testng] [2024-07-22 14:29:47,697] [pool-1-thread-2] Initializing /data/qa-16915/m-04-561.tif: [testng] [2024-07-22 14:29:48,005] [pool-1-thread-9] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w2Filter FITC.TIF: [testng] [2024-07-22 14:29:48,113] [pool-1-thread-12] Initializing /data/qa-16915/m-01.tif: [testng] [2024-07-22 14:29:48,475] [pool-1-thread-10] Initializing /data/alex/Selected FITC.stk: [testng] [2024-07-22 14:29:48,918] [pool-1-thread-4] Initializing /data/jcb/201008090/3T3_ShhN_C_DIC.stk: [testng] [2024-07-22 14:29:49,519] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w3Filter TRITC.TIF: [testng] [2024-07-22 14:29:49,806] [pool-1-thread-5] Initializing /data/tristan/data IJM/mw1_z/MDA_z_MW1(GFP)_w1GFP.TIF: [testng] [2024-07-22 14:29:49,875] [pool-1-thread-10] Initializing /data/andressa/RPE/Sparse/Serum/120806_2_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:49,932] [pool-1-thread-9] Initializing /data/josh/EKM49/EKM49_w2568 -TRITC-_t1.TIF: [testng] [2024-07-22 14:29:50,472] [pool-1-thread-7] Initializing /data/josh/EditedMovies/2101to600e.stk: [testng] [2024-07-22 14:29:50,920] [pool-1-thread-4] Initializing /data/andressa/RPE/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2024-07-22 14:29:51,135] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:51,222] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w2Filter FITC.TIF: [testng] [2024-07-22 14:29:51,270] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:51,445] [pool-1-thread-11] Initializing /data/ascb/golgi marker.tif: [testng] [2024-07-22 14:29:51,925] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:51,926] [pool-1-thread-5] Initializing /data/tristan/data IJM/tl_ z/MDA_TL_z_t1.TIF: [testng] [2024-07-22 14:29:52,126] [pool-1-thread-10] Initializing /data/ascb/mt prc1 kif4 3.tif: [testng] [2024-07-22 14:29:52,546] [pool-1-thread-2] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t1.TIF: [testng] [2024-07-22 14:29:52,597] [pool-1-thread-2] Used files list does not include base file [testng] [2024-07-22 14:29:52,642] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w3Filter TRITC.TIF: [testng] [2024-07-22 14:29:52,810] [pool-1-thread-4] Initializing /data/dan/CavAlpha1D_51490_engG4_F_101111_1.tif: [testng] [2024-07-22 14:29:52,935] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Sparse/Serum/Color Combine.tif: [testng] [2024-07-22 14:29:52,988] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:53,391] [pool-1-thread-10] Initializing /data/gh-2613/ScanSlide_exp1_rep0_w1confGFP_s1.tif: [testng] [2024-07-22 14:29:53,798] [pool-1-thread-5] Initializing /data/aaron/metamorph.stk: [testng] [2024-07-22 14:29:53,909] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:54,004] [pool-1-thread-12] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2Test_001_w1DUAL 491-561.TIF: [testng] [2024-07-22 14:29:54,158] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:54,469] [pool-1-thread-11] Initializing /data/qa-16915/m-04-488.tif: [testng] [2024-07-22 14:29:54,723] [pool-1-thread-7] Initializing /data/ascb/golgi marker 2.tif: [testng] [2024-07-22 14:29:54,886] [pool-1-thread-9] Initializing /data/jmuhlich/metamorph_scan_rgb/Scan 20x obj 40_w1_s1_t1.TIF: [testng] [2024-07-22 14:29:54,970] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:29:55,050] [pool-1-thread-10] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment5_w1DUAL 491-561_t1.TIF: [testng] [2024-07-22 14:29:55,180] [pool-1-thread-2] Initializing /data/ascb/RNA dye MT 2.tif: [testng] [2024-07-22 14:29:55,483] [pool-1-thread-5] Initializing /data/josh/2101to400bstk.stk: [testng] [2024-07-22 14:30:03,097] [pool-1-thread-3] Initializing /data/qa-16887/m-01.tif: [testng] [2024-07-22 14:30:03,753] [pool-1-thread-12] Initializing /data/chris/exp1_w2CSU RED_s3_t003.stk: [testng] [2024-07-22 14:30:03,959] [pool-1-thread-4] Initializing /data/samples/zser24.stk: [testng] [2024-07-22 14:30:04,512] [pool-1-thread-7] Initializing /data/chris/Foo/exp1_w1_s1_t1.tif: [testng] [2024-07-22 14:30:07,802] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.jpg: [testng] [2024-07-22 14:30:07,988] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:08,023] [pool-1-thread-12] Initializing /data/samples/10xcalib.stk: [testng] [2024-07-22 14:30:08,260] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:08,277] [pool-1-thread-2] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t1.TIF: [testng] [2024-07-22 14:30:08,336] [pool-1-thread-2] Used files list does not include base file [testng] [2024-07-22 14:30:08,493] [pool-1-thread-4] Initializing /data/olivier/01/CDYL_D0_frap_100x_01_w1491-DOUBLE-GFP-DsRed_t1.TIF: [testng] [2024-07-22 14:30:08,791] [pool-1-thread-11] Initializing /data/josh/EditedMovies/2101to400a.stk: [testng] [2024-07-22 14:30:09,508] [pool-1-thread-12] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment4_w1CFP-YFP FRET 446.TIF: [testng] [2024-07-22 14:30:09,572] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:09,906] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:10,363] [pool-1-thread-10] Initializing /data/tristan/data IJM/mw3_z/MDA_z_MW3(GFP_RFP_GLP)_w3GLP.TIF: [testng] [2024-07-22 14:30:10,430] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:10,614] [pool-1-thread-2] Initializing /data/qa-16915/m-01-488.ome.tif: [testng] [2024-07-22 14:30:10,833] [pool-1-thread-1] Initializing /data/chris/exp1_w1CSU GREEN_s3_t002.stk: [testng] [2024-07-22 14:30:11,451] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:11,535] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w3Filter TRITC.TIF: [testng] [2024-07-22 14:30:11,621] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2024-07-22 14:30:11,700] [pool-1-thread-1] Initializing /data/doil/001-23 dapi.stk: [testng] [2024-07-22 14:30:13,454] [pool-1-thread-6] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF: [testng] [2024-07-22 14:30:13,694] [pool-1-thread-9] Initializing /data/josh/2101to600b.stk: [testng] [2024-07-22 14:30:15,221] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:15,288] [pool-1-thread-10] Initializing /data/imagesc-wafle-2020-08-18/2020-07-31 BB3084 MT3 DAY 4 reactivation/BB3084 in MT3_1_w1SDC488_s1_t1.stk: [testng] [2024-07-22 14:30:15,417] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.jpg: [testng] [2024-07-22 14:30:15,751] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:15,868] [pool-1-thread-3] Initializing /data/ascb/mt prc1 kif4 1.tif: [testng] [2024-07-22 14:30:16,077] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:16,105] [pool-1-thread-12] Initializing /data/andressa/RPE/Sparse/Fibronectin/Color Combine.tif: [testng] [2024-07-22 14:30:16,470] [pool-1-thread-6] Initializing /data/sebastien-besson/plk1/plk1_561nm_eb3_3_t1.TIF: [testng] [2024-07-22 14:30:16,787] [pool-1-thread-2] Initializing /data/jcb/201008090/3T3_ShhN_C_Nhh594.stk: [testng] [2024-07-22 14:30:16,862] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t1.TIF: [testng] [2024-07-22 14:30:16,926] [pool-1-thread-4] Used files list does not include base file [testng] [2024-07-22 14:30:17,046] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Sparse/Collagen/Color Combine.tif: [testng] [2024-07-22 14:30:17,237] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:17,331] [pool-1-thread-3] Initializing /data/josh/EditedMovies/2101to800.stk: [testng] [2024-07-22 14:30:18,113] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:18,166] [pool-1-thread-6] Initializing /data/chris-de-graffenried/2011-11-01/DOX FAZ1 568 PLK 4881_w1Cy3.stk: [testng] [2024-07-22 14:30:18,218] [pool-1-thread-12] Initializing /data/gh-2613/ScanSlide_exp1_rep1_w1confGFP_s1.stk: [testng] [2024-07-22 14:30:18,425] [pool-1-thread-2] Initializing /data/sebastien-besson/new/04/04_w1Both lasers_t1.TIF: [testng] [2024-07-22 14:30:18,947] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w1Laser4054BD4BP_OverView.tif: [testng] [2024-07-22 14:30:18,973] [pool-1-thread-4] Used files list does not include base file [testng] [2024-07-22 14:30:19,044] [pool-1-thread-11] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t1.TIF: [testng] [2024-07-22 14:30:19,113] [pool-1-thread-11] Used files list does not include base file [testng] [2024-07-22 14:30:19,252] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:19,333] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:19,401] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t2.TIF: [testng] [2024-07-22 14:30:19,478] [pool-1-thread-4] Used files list does not include base file [testng] [2024-07-22 14:30:20,003] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:20,233] [pool-1-thread-6] Initializing /data/ascb/C9 Stack.tif: [testng] [2024-07-22 14:30:20,625] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:21,079] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:21,221] [pool-1-thread-11] Initializing /data/alex/14/LJN_Y1136_14_w2FITC_t2.STK: [testng] [2024-07-22 14:30:21,496] [pool-1-thread-12] Initializing /data/chris/test2_w2_s1_t1.stk: [testng] [2024-07-22 14:30:21,761] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:21,851] [pool-1-thread-3] Initializing /data/tristan/data IJM/mw2/MDA_mw2(GFP-RFP)_w1GFP.TIF: [testng] [2024-07-22 14:30:21,960] [pool-1-thread-4] Initializing /data/chris/Stream-2(partial).stk: [testng] [2024-07-22 14:30:23,081] [pool-1-thread-11] Initializing /data/andressa/RPE/Full Confluency/Serum/Color Combine.tif: [testng] [2024-07-22 14:30:23,413] [pool-1-thread-12] Initializing /data/heiko/sample_2x2.stk: [testng] [2024-07-22 14:30:23,913] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:24,067] [pool-1-thread-6] Initializing /data/ascb/monopolar mt aim.tif: [testng] [2024-07-22 14:30:24,392] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:24,816] [pool-1-thread-3] Initializing /data/sebastien/GA-2222 raf-1_w2Mono 475 nm.STK: [testng] [2024-07-22 14:30:24,899] [pool-1-thread-11] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t1.TIF: [testng] [2024-07-22 14:30:24,973] [pool-1-thread-11] Used files list does not include base file [testng] [2024-07-22 14:30:24,990] [pool-1-thread-12] Initializing /data/ascb/RNA dye MT.tif: [testng] [2024-07-22 14:30:25,284] [pool-1-thread-6] Initializing /data/jcb/201007118/si133_J3_5_w18- 30- GFP_t1.STK: [testng] [2024-07-22 14:30:25,401] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:25,956] [pool-1-thread-8] Initializing /data/samples/test-plate/test_s10_t1.tif: [testng] [2024-07-22 14:30:27,621] [pool-1-thread-9] Initializing /data/ascb/C1 Stack.stk: [testng] [2024-07-22 14:30:27,728] [pool-1-thread-2] Initializing /data/heiko/metadata_3x3.jpg: [testng] [2024-07-22 14:30:27,869] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:27,950] [pool-1-thread-3] Initializing /data/jerome/deconv.STK: [testng] [2024-07-22 14:30:28,131] [pool-1-thread-2] Initializing /data/andressa/RPE/Full Confluency/Collagen/Color Combine 2.tif: [testng] [2024-07-22 14:30:28,220] [pool-1-thread-12] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t11_w1Laser4054BD4BP.stk: [testng] [2024-07-22 14:30:28,478] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:28,509] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w2Filter FITC.TIF: [testng] [2024-07-22 14:30:28,588] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.tif: [testng] [2024-07-22 14:30:28,715] [pool-1-thread-12] Initializing /data/jae/RGB_s34.tif: [testng] [2024-07-22 14:30:28,886] [pool-1-thread-3] Initializing /data/bill/OX218B3/OX218B3_w1488nm- 30-_t1.STK: [testng] [2024-07-22 14:30:29,511] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:29,850] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t2.TIF: [testng] [2024-07-22 14:30:29,912] [pool-1-thread-10] Used files list does not include base file [testng] [2024-07-22 14:30:29,960] [pool-1-thread-2] Initializing /data/strand/TS_200nm_3_w2Fluo GFP -100-.TIF: [testng] [2024-07-22 14:30:30,173] [pool-1-thread-6] Initializing /data/steve/Experiment2.tif: [testng] [2024-07-22 14:30:30,303] [pool-1-thread-9] Initializing /data/grant/Scale_bar_100um_XY_image.TIF: [testng] [2024-07-22 14:30:30,559] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:30,856] [pool-1-thread-11] Initializing /data/andressa/RPE/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2024-07-22 14:30:30,940] [pool-1-thread-12] Initializing /data/qa-16915/m-01-561.ome.tif: [testng] [2024-07-22 14:30:31,143] [pool-1-thread-2] Initializing /data/bill/FromBillM_New_MM_MDAdata/RWeD62u7dF1Mom1_w1CelegansDIC 100x_t1.TIF: [testng] [2024-07-22 14:30:32,099] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:32,113] [pool-1-thread-4] Initializing /data/josh/EditedMovies/2101to600f.stk: [testng] [2024-07-22 14:30:32,922] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:33,022] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:33,199] [pool-1-thread-6] Initializing /data/aaron/RR11_2 TRAINED mid lobIX 63X GFP568_s1.STK: [testng] [2024-07-22 14:30:33,412] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:33,727] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2024-07-22 14:30:33,804] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2024-07-22 14:30:33,867] [pool-1-thread-9] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/Color Combine.tif: [testng] [2024-07-22 14:30:34,156] [pool-1-thread-11] Initializing /data/fabrice/100722ac-2_w1RED_s1_t1.TIF: [testng] [2024-07-22 14:30:34,283] [pool-1-thread-12] Initializing /data/sebastian/CLC2_GFP root4/0.1% DMSO root4001.tif: [testng] [2024-07-22 14:30:34,622] [pool-1-thread-6] Initializing /data/thomas/t_test2001.tif: [testng] [2024-07-22 14:30:34,768] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:34,919] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.TIF: [testng] [2024-07-22 14:30:35,090] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w2Filter FITC.TIF: [testng] [2024-07-22 14:30:35,305] [pool-1-thread-12] Initializing /data/chris/exp1_w2CSU RED_s3_t001.stk: [testng] [2024-07-22 14:30:35,392] [pool-1-thread-6] Initializing /data/ascb/mt prc1 kif4 2.tif: [testng] [2024-07-22 14:30:35,487] [pool-1-thread-3] Initializing /data/ascb/mt prc1 kif4.tif: [testng] [2024-07-22 14:30:35,626] [pool-1-thread-9] Initializing /data/pang/z-stack/Z Series.tif: [testng] [2024-07-22 14:30:36,057] [pool-1-thread-11] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c1s1t11_Laser4054BD4BP.stk: [testng] [2024-07-22 14:30:36,084] [pool-1-thread-11] Used files list does not include base file [testng] [2024-07-22 14:30:36,590] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:30:39,179] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:31:00,814] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:39:17,718] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 11077, Failures: 82, Skips: 0 [testng] =============================================== [testng] [testng] The tests failed. BUILD FAILED /bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest Total time: 22 minutes 52 seconds Build step 'Execute shell' marked build as failure Finished: FAILURE