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Started by upstream project "BIOFORMATS-test-repo" build number 129 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins4058360301006873783.sh + '[' micromanager = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_20233_merge_ci -v /uod/idr/repos/curated/micromanager:/data -v /uod/idr-scratch/merge-ci/curated/micromanager:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 14:21:44,565 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 14:21:44,566 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 14:21:44,567 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 14:21:44,568 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 14:21:44,568 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 14:21:44,568 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 14:21:44,568 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 14:21:44,568 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 14:21:44,569 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 14:21:44,569 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 14:21:44,569 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 14:21:44,569 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 14:21:44,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 14:21:44,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 14:21:44,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 14:21:44,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 14:21:44,853 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 14:21:44,853 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 14:21:44,853 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 14:21:44,854 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 14:21:44,854 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 14:21:44,856 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 14:21:44,856 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 287 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-22 14:21:44,868] [main] java.version = 1.8.0_342 [testng] 14:21:44,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 14:21:44,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:21:44,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-22_14-21-44.log] [testng] 14:21:44,919 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-22 14:21:44,921] [main] testng.directory = /data [testng] [2024-07-22 14:21:44,921] [main] testng.configDirectory = /config [testng] [2024-07-22 14:21:44,934] [main] testng.multiplier = 1.0 [testng] [2024-07-22 14:21:44,934] [main] testng.in-memory = false [testng] [2024-07-22 14:21:44,934] [main] testng.allow-missing = false [testng] [2024-07-22 14:21:44,935] [main] user.language = fr [testng] [2024-07-22 14:21:44,935] [main] user.country = FR [testng] [2024-07-22 14:21:44,935] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-22 14:21:52,111] [main] ---------------------------------------- [testng] [2024-07-22 14:21:52,111] [main] Total files: 1686 [testng] [2024-07-22 14:21:52,111] [main] Scan time: 7.176 s (4 ms/file) [testng] [2024-07-22 14:21:52,111] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 49 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-22 14:27:42,846] [pool-1-thread-1] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_007.tif: [testng] 14:27:42,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 14:27:42,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:42,848 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-22_14-27-42.log] [testng] 14:27:42,848 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41eda736 - End of configuration. [testng] [2024-07-22 14:27:42,999] [pool-1-thread-1] Used files list does not include base file [testng] [2024-07-22 14:27:43,001] [pool-1-thread-12] Initializing /data/scott/EMoffslicefurst2Time_0/img_000000000_491_000.tif: [testng] 14:27:43,002 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 14:27:43,002 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:43,003 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-22_14-27-43.log] [testng] 14:27:43,003 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53ea7ebb - End of configuration. [testng] [2024-07-22 14:27:43,055] [pool-1-thread-11] Initializing /data/public/1.4.16/serge/Pos0/img_000000000_00-BF0_000.tif: [testng] 14:27:43,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 14:27:43,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:43,056 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-22_14-27-43.log] [testng] 14:27:43,057 |-INFO in ch.qos.logback.core.sift.SiftProcessor@431d7df6 - End of configuration. [testng] [2024-07-22 14:27:43,245] [pool-1-thread-10] Initializing /data/david/img_000000000_white_000.tif: [testng] 14:27:43,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 14:27:43,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:43,246 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-22_14-27-43.log] [testng] 14:27:43,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61522a1d - End of configuration. [testng] [2024-07-22 14:27:45,739] [pool-1-thread-9] Initializing /data/public/1.4.22/thomas/test/test_stack/test_stack_MMStack_Pos0_metadata.txt: [testng] 14:27:45,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 14:27:45,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:45,739 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-22_14-27-45.log] [testng] 14:27:45,740 |-INFO in ch.qos.logback.core.sift.SiftProcessor@186c91dd - End of configuration. [testng] [2024-07-22 14:27:45,766] [pool-1-thread-8] Initializing /data/public/1.4.23/jens/fucci_GFP-geminin_RFP-cdt1_2_MMStack_Pos0_metadata.txt: [testng] 14:27:45,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 14:27:45,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:45,767 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-22_14-27-45.log] [testng] 14:27:45,767 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1eb7737e - End of configuration. [testng] [2024-07-22 14:27:46,181] [pool-1-thread-7] Initializing /data/eric/GFP-Aladin mCh-Tub_4/Acqusition.xml: [testng] 14:27:46,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 14:27:46,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:46,182 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-22_14-27-46.log] [testng] 14:27:46,182 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9046527 - End of configuration. [testng] [2024-07-22 14:27:50,699] [pool-1-thread-6] Initializing /data/scott/EMoffchanfurst2Time_0/img_000000000_491_000.tif: [testng] 14:27:50,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 14:27:50,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:50,700 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-22_14-27-50.log] [testng] 14:27:50,700 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58897010 - End of configuration. [testng] [2024-07-22 14:27:50,748] [pool-1-thread-5] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_000_000_metadata.txt: [testng] 14:27:50,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 14:27:50,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:50,749 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-22_14-27-50.log] [testng] 14:27:50,749 |-INFO in ch.qos.logback.core.sift.SiftProcessor@148933 - End of configuration. [testng] [2024-07-22 14:27:50,786] [pool-1-thread-4] Initializing /data/kally/img_000000000_Brightfield_000.tif: [testng] 14:27:50,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 14:27:50,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:50,787 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-22_14-27-50.log] [testng] 14:27:50,787 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1cf3d873 - End of configuration. [testng] [2024-07-22 14:27:52,026] [pool-1-thread-3] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_000_001_metadata.txt: [testng] 14:27:52,026 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 14:27:52,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:52,027 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-22_14-27-52.log] [testng] 14:27:52,028 |-INFO in ch.qos.logback.core.sift.SiftProcessor@359906ce - End of configuration. [testng] [2024-07-22 14:27:52,080] [pool-1-thread-2] Initializing /data/public/1.4.16/serge/Pos3/img_000000000_00-BF0_000.tif: [testng] 14:27:52,081 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 14:27:52,081 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:27:52,081 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-22_14-27-52.log] [testng] 14:27:52,082 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d4f1ca - End of configuration. [testng] [2024-07-22 14:27:53,636] [pool-1-thread-9] Initializing /data/public/1.4.16/serge/Pos1/img_000000000_00-BF0_000.tif: [testng] [2024-07-22 14:27:53,917] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:27:53,942] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:27:54,162] [pool-1-thread-5] Initializing /data/david/trial 2 part 3 40x_0/Acqusition.xml: [testng] [2024-07-22 14:27:54,433] [pool-1-thread-3] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_001_000_metadata.txt: [testng] [2024-07-22 14:27:54,685] [pool-1-thread-6] Initializing /data/eric/GFP-Aladin mCh-Tub_0/Acqusition.xml: [testng] [2024-07-22 14:27:55,853] [pool-1-thread-12] Initializing /data/public/1.4.16/serge/Pos2/img_000000000_00-BF0_000.tif: [testng] [2024-07-22 14:27:56,087] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:27:56,150] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:27:56,436] [pool-1-thread-5] Initializing /data/scott/EMonslicefurst2Time_0/img_000000000_491_000.tif: [testng] [2024-07-22 14:27:56,497] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:27:56,497] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:27:56,636] [pool-1-thread-3] Initializing /data/eric/GFP-Aladin mCh-Tub_5/Acqusition.xml: [testng] [2024-07-22 14:27:57,686] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:27:57,740] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:27:57,900] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:27:58,089] [pool-1-thread-5] Initializing /data/nico/S2-GFP-Histone-Cherry-tub_9_Great2/metadata.txt: [testng] [2024-07-22 14:28:00,262] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:00,308] [pool-1-thread-1] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_007.tif: [testng] [2024-07-22 14:28:00,411] [pool-1-thread-1] Used files list does not include base file [testng] [2024-07-22 14:28:00,504] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:00,824] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:00,839] [pool-1-thread-8] Initializing /data/nico/MM_test_0/img_0_Cy5_0.tif: [testng] [2024-07-22 14:28:01,022] [pool-1-thread-2] Initializing /data/stanislav/s105-GFP-_0/img_000000000_GFP_000.tif: [testng] [2024-07-22 14:28:01,084] [pool-1-thread-11] Initializing /data/public/1.4.16/serge/Pos5/img_000000000_00-BF0_000.tif: [testng] [2024-07-22 14:28:01,309] [pool-1-thread-6] Initializing /data/nico/Untitled_4_multi_file/img_000000000_gfpFast_000.tif: [testng] [2024-07-22 14:28:01,745] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:01,904] [pool-1-thread-8] Initializing /data/eric/GFP-Aladin mCh-Tub_3/Acqusition.xml: [testng] [2024-07-22 14:28:02,462] [pool-1-thread-9] Initializing /data/eric/GFP-Aladin mCh-Tub_1/Acqusition.xml: [testng] [2024-07-22 14:28:03,490] [pool-1-thread-12] Initializing /data/scott/EMonchanfurst2Time_0/img_000000000_491_000.tif: [testng] [2024-07-22 14:28:03,665] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:04,062] [pool-1-thread-2] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_006.tif: [testng] [2024-07-22 14:28:04,178] [pool-1-thread-2] Used files list does not include base file [testng] [2024-07-22 14:28:04,179] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:04,523] [pool-1-thread-9] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_009.tif: [testng] [2024-07-22 14:28:04,650] [pool-1-thread-9] Used files list does not include base file [testng] [2024-07-22 14:28:04,650] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:04,959] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:05,336] [pool-1-thread-12] Initializing /data/eric/GFP-Aladin mCh-Tub_2/Acqusition.xml: [testng] [2024-07-22 14:28:05,420] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:05,573] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:05,592] [pool-1-thread-6] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_009.tif: [testng] [2024-07-22 14:28:05,679] [pool-1-thread-6] Used files list does not include base file [testng] [2024-07-22 14:28:05,861] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:05,874] [pool-1-thread-8] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_008.tif: [testng] [2024-07-22 14:28:05,969] [pool-1-thread-8] Used files list does not include base file [testng] [2024-07-22 14:28:06,221] [pool-1-thread-1] Initializing /data/pr-3253/img_000000000__000.tif: [testng] [2024-07-22 14:28:06,596] [pool-1-thread-4] Initializing /data/david/res test/res test.tif: [testng] [2024-07-22 14:28:06,891] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:06,909] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:07,162] [pool-1-thread-12] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_008.tif: [testng] [2024-07-22 14:28:07,264] [pool-1-thread-12] Used files list does not include base file [testng] [2024-07-22 14:28:07,487] [pool-1-thread-10] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_001_001_metadata.txt: [testng] [2024-07-22 14:28:07,577] [pool-1-thread-4] Initializing /data/nico/test_1/Acqusition.xml: [testng] [2024-07-22 14:28:07,674] [pool-1-thread-1] Initializing /data/public/1.4.22/sebastien/Test_Dataset_MultiPosition_Stack_1_MMStack_Pos0_metadata.txt: [testng] [2024-07-22 14:28:26,375] [pool-1-thread-11] Initializing /data/public/1.4.22/thomas/test/test2_stack/MMStack_Pos0_metadata.txt: [testng] [2024-07-22 14:28:26,780] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:26,788] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:26,789] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:26,793] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:26,795] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:28:26,983] [pool-1-thread-10] Initializing /data/pr-3229/1.4-large-acq-take-2_1_MMStack_Pos0_metadata.txt: [testng] [2024-07-22 14:32:40,952] [pool-1-thread-11] Initializing /data/public/1.4.22/thomas/test/test_sep/Pos0/img_000000000_FITC_000.tif: [testng] [2024-07-22 14:32:41,055] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:32:41,158] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:32:41,312] [pool-1-thread-6] Initializing /data/nico/test2/img_000000000_Cy5_000.tif: [testng] [2024-07-22 14:32:41,397] [pool-1-thread-2] Initializing /data/qa-4984/img_000000000__000.tif: [testng] [2024-07-22 14:32:41,435] [pool-1-thread-9] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_006.tif: [testng] [2024-07-22 14:32:41,522] [pool-1-thread-9] Used files list does not include base file [testng] [2024-07-22 14:32:41,523] [pool-1-thread-12] Initializing /data/public/1.4.16/serge/Pos4/img_000000000_00-BF0_000.tif: [testng] [2024-07-22 14:32:41,657] [pool-1-thread-8] Initializing /data/colin/20121205_H_rel_3c_0nm_1/img_000000000_Cy5_000.tif: [testng] [2024-07-22 14:32:44,415] [pool-1-thread-4] Initializing /data/public/1.4.22/thomas/test/test2_sep/Pos0/metadata.txt: [testng] [2024-07-22 14:32:44,438] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:32:44,567] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:32:44,662] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:32:44,792] [pool-1-thread-6] Initializing /data/eik/1-Pos_000_000/img_000000000_Blue_002.tif: [testng] [2024-07-22 14:32:45,642] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:32:47,714] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:32:47,825] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:32:49,093] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:32:50,868] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 2597, Failures: 37, Skips: 0 [testng] =============================================== [testng] [testng] The tests failed. BUILD FAILED /bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest Total time: 38 minutes 24 seconds Build step 'Execute shell' marked build as failure Finished: FAILURE